Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_02s0012g02000.t01 | Wine grape | cytosol | 19.61 | 72.22 |
| KRH73622 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 25.22 | 69.64 |
| VIT_12s0028g00720.t01 | Wine grape | extracellular | 12.39 | 66.86 |
| HORVU5Hr1G005770.3 | Barley | cytosol | 60.78 | 65.05 |
| Os12t0626300-01 | Rice | cytosol, extracellular, plasma membrane | 63.9 | 64.74 |
| TraesCS5D01G025900.1 | Wheat | cytosol, nucleus, peroxisome | 63.58 | 64.13 |
| TraesCS5B01G017800.1 | Wheat | cytosol | 63.47 | 63.88 |
| Zm00001d040342_P001 | Maize | cytosol | 62.5 | 63.88 |
| EES02737 | Sorghum | cytosol, nucleus, plasma membrane | 62.61 | 63.78 |
| TraesCS5A01G020800.1 | Wheat | cytosol | 63.04 | 63.45 |
| VIT_12s0028g00740.t01 | Wine grape | nucleus | 36.96 | 61.91 |
| KRH14509 | Soybean | extracellular, mitochondrion, plasma membrane, plastid | 54.74 | 55.1 |
| Solyc08g067190.2.1 | Tomato | cytosol, plastid | 54.63 | 52.43 |
| Bra015512.1-P | Field mustard | mitochondrion | 51.4 | 52.19 |
| CDY10211 | Canola | mitochondrion | 51.72 | 52.17 |
| CDY06653 | Canola | mitochondrion | 51.29 | 52.08 |
| AT1G06590.1 | Thale cress | mitochondrion | 51.29 | 51.97 |
| Bra032414.1-P | Field mustard | mitochondrion, plastid | 50.32 | 51.26 |
| CDY06219 | Canola | mitochondrion, plastid | 49.78 | 51.16 |
| CDY09966 | Canola | mitochondrion, plastid | 48.28 | 50.62 |
| VIT_12s0028g00810.t01 | Wine grape | plastid | 11.53 | 39.63 |
| Zm00001d009576_P002 | Maize | cytosol | 9.05 | 36.84 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr9P29220_001 | EnsemblPlants:GSMUA_Achr9T29220_001 | EnsemblPlantsGene:GSMUA_Achr9G29220_001 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0005680 | InterPro:Apc5 | InterPro:Apc5_dom | ncoils:Coil | PANTHER:PTHR12830 |
| PANTHER:PTHR12830:SF9 | PFAM:PF12862 | SEG:seg | UniParc:UPI000296B3AF | UniProt:M0U4H9 | MapMan:13.3.4.1.1.1.3 |
Description
Anaphase-promoting complex subunit 5 [Source:GMGC_GENE;Acc:GSMUA_Achr9G29220_001]
Coordinates
chr9:-:32955956..32979176
Molecular Weight (calculated)
102702.0 Da
IEP (calculated)
5.958
GRAVY (calculated)
-0.030
Length
928 amino acids
Sequence
(BLAST)
(BLAST)
001: MVGDGNIDKR RKRKSNPRFV PLRCSEPFER RFRPMAGGGS LKEGGSPVFD ITPHKIAVCH LVQVFALHTQ PDMPFAFQSI SQHHRLGLFL FSLTRSCESF
101: LDPSLEELLN QLKALGGLAM LSEHLISNLL VLSSPDDLFN FFDKLRGVLA APEGSSMEEE QTLLDPNSHL GIFIRCCILT FNMLPFEGVC HLLTNLVAYC
201: NSNDSTYEMA EDDDFNGSEF HELLEDPEVY CEAAEFEEYG LENDAQAAEN LTHIPGGLIP LLNNNFRTDD NLGVLRSRWQ IEGYLNMQAD LLEKDAISFP
301: LYSFSATLRQ LQKLAPELHR ARYLQYLNAL YHNDYLSALD ELHCYFDYSA GMEGLFSRSP SPSSEFEVGR FETALLCLGT LQCHFGHPKK ALEALTEAVR
401: IAQQNNDDSC LAYTLAAICK LLSEIGISNM TGIIGSPYSL GTTTGLGTPL STQQQLLVLL KRSLERADHL KLTNLLAFNH LALAKFDLKH VKKPLLSFGP
501: KASMKLRTCP TSVCRELRLS SHVLSEFGAD GLLQLNDTGA FSTSWLKNLS AVGNPWLKKL QKPRSLSVND YDTFQFYAQP NPMPGSVLQL AGASYLLRAT
601: SWEHYGSAPL VRMNALVYAT CFADAASSSE LSLAYVKLIQ HLSVFKGYTE AFNALKLAED KFSVSSTHIR LLKLQLLHER ALHRGNLQEA QQVCDQFGVL
701: ASSVTGVHME LKTEASLRHA RTLLAANQFS QAAAVASNLF CTCYKFNMQV ENATVLLLLA EIHKKSGDAV LGLSYVLASL SFCKTFNLDL LEASATVTLA
801: ELWLSLGSSH AKKASSLIYQ ALPMILGHGG LELRARANIA VAKCLLADPS YLVSEDPDAV LDPLSQASEE LQILEYHEMA AEAFYLMAII FNSLGRLDER
901: ENSAASFKKH VIALENPQDE DNLPTHGV
101: LDPSLEELLN QLKALGGLAM LSEHLISNLL VLSSPDDLFN FFDKLRGVLA APEGSSMEEE QTLLDPNSHL GIFIRCCILT FNMLPFEGVC HLLTNLVAYC
201: NSNDSTYEMA EDDDFNGSEF HELLEDPEVY CEAAEFEEYG LENDAQAAEN LTHIPGGLIP LLNNNFRTDD NLGVLRSRWQ IEGYLNMQAD LLEKDAISFP
301: LYSFSATLRQ LQKLAPELHR ARYLQYLNAL YHNDYLSALD ELHCYFDYSA GMEGLFSRSP SPSSEFEVGR FETALLCLGT LQCHFGHPKK ALEALTEAVR
401: IAQQNNDDSC LAYTLAAICK LLSEIGISNM TGIIGSPYSL GTTTGLGTPL STQQQLLVLL KRSLERADHL KLTNLLAFNH LALAKFDLKH VKKPLLSFGP
501: KASMKLRTCP TSVCRELRLS SHVLSEFGAD GLLQLNDTGA FSTSWLKNLS AVGNPWLKKL QKPRSLSVND YDTFQFYAQP NPMPGSVLQL AGASYLLRAT
601: SWEHYGSAPL VRMNALVYAT CFADAASSSE LSLAYVKLIQ HLSVFKGYTE AFNALKLAED KFSVSSTHIR LLKLQLLHER ALHRGNLQEA QQVCDQFGVL
701: ASSVTGVHME LKTEASLRHA RTLLAANQFS QAAAVASNLF CTCYKFNMQV ENATVLLLLA EIHKKSGDAV LGLSYVLASL SFCKTFNLDL LEASATVTLA
801: ELWLSLGSSH AKKASSLIYQ ALPMILGHGG LELRARANIA VAKCLLADPS YLVSEDPDAV LDPLSQASEE LQILEYHEMA AEAFYLMAII FNSLGRLDER
901: ENSAASFKKH VIALENPQDE DNLPTHGV
001: MAGLTRTAGA FAVTPHKISV CILLQIYAPS AQMSLPFPFS SVAQHNRLGL YLLSLTKSCD DIFEPKLEKL INQLREVGEE MDAWLTDHLT NRFSSLASPD
101: DLLNFFNDMR GILGSLDSGV VQDDQIILDP NSNLGMFVRR CILAFNLLSF EGVCHLFSSI EDYCKEAHSS FAQFGAPNNN LESLIQYDQM DMENYAMDKP
201: TEEIEFQKTA SGIVPFHLHT PDSLMKATEG LLHNRKETSR TSKKDTEATP VARASTSTLE ESLVDESLFL RTNLQIQGFL MEQADAIEIH GSSSSFSSSS
301: IESFLDQLQK LAPELHRVHF LRYLNKLHSD DYFAALDNLL RYFDYSAGTE GFDLVPPSTG CSMYGRYEIG LLCLGMMHFR FGHPNLALEV LTEAVRVSQQ
401: LSNDTCLAYT LAAMSNLLSE MGIASTSGVL GSSYSPVTST ASSLSVQQRV YILLKESLRR ADSLKLRRLV ASNHLAMAKF ELMHVQRPLL SFGPKASMRH
501: KTCPVSVCKE IRLGAHLISD FSSESSTMTI DGSLSSAWLK DLQKPWGPPV ISPDSGSRKS STFFQLCDHL VSIPGSVSQL IGASYLLRAT SWELYGSAPM
601: ARMNTLVYAT LFGDSSSSSD AELAYLKLIQ HLALYKGYKD AFAALKVAEE KFLTVSKSKV LLLKLQLLHE RALHCGNLKL AQRICNELGG LASTAMGVDM
701: ELKVEASLRE ARTLLAAKQY SQAANVAHSL FCTCHKFNLQ IEKASVLLLL AEIHKKSGNA VLGLPYALAS ISFCQSFNLD LLKASATLTL AELWLGLGSN
801: HTKRALDLLH GAFPMILGHG GLELRARAYI FEANCYLSDP SSSVSTDSDT VLDSLRQASD ELQALEYHEL AAEASYLMAM VYDKLGRLDE REEAASLFKK
901: HIIALENPQD VEQNMA
101: DLLNFFNDMR GILGSLDSGV VQDDQIILDP NSNLGMFVRR CILAFNLLSF EGVCHLFSSI EDYCKEAHSS FAQFGAPNNN LESLIQYDQM DMENYAMDKP
201: TEEIEFQKTA SGIVPFHLHT PDSLMKATEG LLHNRKETSR TSKKDTEATP VARASTSTLE ESLVDESLFL RTNLQIQGFL MEQADAIEIH GSSSSFSSSS
301: IESFLDQLQK LAPELHRVHF LRYLNKLHSD DYFAALDNLL RYFDYSAGTE GFDLVPPSTG CSMYGRYEIG LLCLGMMHFR FGHPNLALEV LTEAVRVSQQ
401: LSNDTCLAYT LAAMSNLLSE MGIASTSGVL GSSYSPVTST ASSLSVQQRV YILLKESLRR ADSLKLRRLV ASNHLAMAKF ELMHVQRPLL SFGPKASMRH
501: KTCPVSVCKE IRLGAHLISD FSSESSTMTI DGSLSSAWLK DLQKPWGPPV ISPDSGSRKS STFFQLCDHL VSIPGSVSQL IGASYLLRAT SWELYGSAPM
601: ARMNTLVYAT LFGDSSSSSD AELAYLKLIQ HLALYKGYKD AFAALKVAEE KFLTVSKSKV LLLKLQLLHE RALHCGNLKL AQRICNELGG LASTAMGVDM
701: ELKVEASLRE ARTLLAAKQY SQAANVAHSL FCTCHKFNLQ IEKASVLLLL AEIHKKSGNA VLGLPYALAS ISFCQSFNLD LLKASATLTL AELWLGLGSN
801: HTKRALDLLH GAFPMILGHG GLELRARAYI FEANCYLSDP SSSVSTDSDT VLDSLRQASD ELQALEYHEL AAEASYLMAM VYDKLGRLDE REEAASLFKK
901: HIIALENPQD VEQNMA
Arabidopsis Description
APC5Anaphase-promoting complex subunit 5 [Source:UniProtKB/Swiss-Prot;Acc:Q8H1U4]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.