Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 3
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY06653 | Canola | mitochondrion | 97.83 | 98.47 |
| AT1G06590.1 | Thale cress | mitochondrion | 90.22 | 90.61 |
| CDY06219 | Canola | mitochondrion, plastid | 88.48 | 90.14 |
| CDY09966 | Canola | mitochondrion, plastid | 85.22 | 88.59 |
| VIT_02s0012g02000.t01 | Wine grape | cytosol | 20.54 | 75.0 |
| VIT_12s0028g00720.t01 | Wine grape | extracellular | 13.8 | 73.84 |
| KRH73622 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 26.96 | 73.81 |
| KRH14509 | Soybean | extracellular, mitochondrion, plasma membrane, plastid | 66.09 | 65.94 |
| VIT_12s0028g00740.t01 | Wine grape | nucleus | 38.26 | 63.54 |
| Solyc08g067190.2.1 | Tomato | cytosol, plastid | 60.65 | 57.7 |
| HORVU5Hr1G005770.3 | Barley | cytosol | 49.02 | 52.02 |
| GSMUA_Achr9P29220_001 | Banana | nucleus | 52.17 | 51.72 |
| Os12t0626300-01 | Rice | cytosol, extracellular, plasma membrane | 50.76 | 50.98 |
| TraesCS5B01G017800.1 | Wheat | cytosol | 50.65 | 50.54 |
| TraesCS5D01G025900.1 | Wheat | cytosol, nucleus, peroxisome | 50.43 | 50.43 |
| TraesCS5A01G020800.1 | Wheat | cytosol | 50.54 | 50.43 |
| EES02737 | Sorghum | cytosol, nucleus, plasma membrane | 48.7 | 49.18 |
| Zm00001d021235_P001 | Maize | plastid | 1.74 | 18.82 |
Protein Annotations
| MapMan:13.3.4.1.1.1.3 | UniProt:A0A078FA13 | InterPro:Apc5 | InterPro:Apc5_dom | EnsemblPlants:CDY10211 | ProteinID:CDY10211 |
| ProteinID:CDY10211.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005680 | EnsemblPlantsGene:GSBRNA2T00032033001 | InterPro:IPR011990 |
| PFAM:PF12862 | PANTHER:PTHR12830 | PANTHER:PTHR12830:SF9 | SUPFAM:SSF48452 | InterPro:TPR-like_helical_dom_sf | UniPathway:UPA00143 |
| UniParc:UPI0004EF2B9D | SEG:seg | : | : | : | : |
Description
BnaC05g04540DBnaC05g04540D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FA13]
Coordinates
chrLK032001:-:586706..593951
Molecular Weight (calculated)
102021.0 Da
IEP (calculated)
6.383
GRAVY (calculated)
-0.026
Length
920 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGLTRTAGA FAVTPHKISV CILLQLYAPS AQMSLPFPFS SISQHNRLGL YLLSLTKSCD DIFEPKLENL INQLREVGED MDAWLTDHLT NRFSSLTSPD
101: DLLNFFNDMR GILGSLDSVA AQDDQIILDP NSNLGMFVRR CILAFNLLSF EGVCHLFTSI EVYCREAHSS SAQYDASNDN LGSLIQHDQM DMEKYIMDKA
201: TEEIELQKNA SGRVPFHLHT PEALFKVTEE QMKHACLLVT RKEKSSTNTK KAEATQLACA SSSTVNDTLV DESLFLRTNY QIQGFLMEQA DAIETHGSSL
301: SSSSIESFLQ KLQNLAPELH RVHFLRYLNK LHSDDYFAAL ENLLRYFDYS AGTEGFDLVL PSTGCSMYGR YEIALLCLGM MHFRFGHPNL ALEVLTEAVR
401: VSQQHSNDTC LAYTLAAMSN LLSEMGIAST TSVLGSSYSP VTSTASLLSV QQRVYILLKE SLRRADTLKL RRLVASNHLA MAKFELMHVQ RPLLSFGPKA
501: SVRHKTCPVS VCKEIRLGAH LLSDFSAESS TMTIDGSLSS VWLKDLQKPW GQPVFSQESG SRKSSTFFQF CDHLVSIPGS VSQIIGASYL LRATSWELYG
601: SAPMARMNTL VYATLFGDSS SSSDAELAYL KLIQHLALYK GYKDAFAALK IAEEKFLTVS KSKILLLKLQ LLHEHALHRG NLKLAQRMCN ELGGLASTTM
701: GVDMELKVEA SLREARTLLA AKQYSQAANV AHSLFCTCHK FNLQIEKASV LLLLAEIHKK SGNAVLGLPY ALASISFCQS FNLDLLKASA TLTLAELWLG
801: LGSNHAKRAL DLLHGAFPMI LGHGGLELRA RAYIFEANCY LSDPSFSVST DSDTVLDSLR QASDELQALE YHELAAEAFY LMAMVYDKLG RLEEREEAAT
901: LFKKHITALE NPQDEEPNMA
101: DLLNFFNDMR GILGSLDSVA AQDDQIILDP NSNLGMFVRR CILAFNLLSF EGVCHLFTSI EVYCREAHSS SAQYDASNDN LGSLIQHDQM DMEKYIMDKA
201: TEEIELQKNA SGRVPFHLHT PEALFKVTEE QMKHACLLVT RKEKSSTNTK KAEATQLACA SSSTVNDTLV DESLFLRTNY QIQGFLMEQA DAIETHGSSL
301: SSSSIESFLQ KLQNLAPELH RVHFLRYLNK LHSDDYFAAL ENLLRYFDYS AGTEGFDLVL PSTGCSMYGR YEIALLCLGM MHFRFGHPNL ALEVLTEAVR
401: VSQQHSNDTC LAYTLAAMSN LLSEMGIAST TSVLGSSYSP VTSTASLLSV QQRVYILLKE SLRRADTLKL RRLVASNHLA MAKFELMHVQ RPLLSFGPKA
501: SVRHKTCPVS VCKEIRLGAH LLSDFSAESS TMTIDGSLSS VWLKDLQKPW GQPVFSQESG SRKSSTFFQF CDHLVSIPGS VSQIIGASYL LRATSWELYG
601: SAPMARMNTL VYATLFGDSS SSSDAELAYL KLIQHLALYK GYKDAFAALK IAEEKFLTVS KSKILLLKLQ LLHEHALHRG NLKLAQRMCN ELGGLASTTM
701: GVDMELKVEA SLREARTLLA AKQYSQAANV AHSLFCTCHK FNLQIEKASV LLLLAEIHKK SGNAVLGLPY ALASISFCQS FNLDLLKASA TLTLAELWLG
801: LGSNHAKRAL DLLHGAFPMI LGHGGLELRA RAYIFEANCY LSDPSFSVST DSDTVLDSLR QASDELQALE YHELAAEAFY LMAMVYDKLG RLEEREEAAT
901: LFKKHITALE NPQDEEPNMA
001: MAGLTRTAGA FAVTPHKISV CILLQIYAPS AQMSLPFPFS SVAQHNRLGL YLLSLTKSCD DIFEPKLEKL INQLREVGEE MDAWLTDHLT NRFSSLASPD
101: DLLNFFNDMR GILGSLDSGV VQDDQIILDP NSNLGMFVRR CILAFNLLSF EGVCHLFSSI EDYCKEAHSS FAQFGAPNNN LESLIQYDQM DMENYAMDKP
201: TEEIEFQKTA SGIVPFHLHT PDSLMKATEG LLHNRKETSR TSKKDTEATP VARASTSTLE ESLVDESLFL RTNLQIQGFL MEQADAIEIH GSSSSFSSSS
301: IESFLDQLQK LAPELHRVHF LRYLNKLHSD DYFAALDNLL RYFDYSAGTE GFDLVPPSTG CSMYGRYEIG LLCLGMMHFR FGHPNLALEV LTEAVRVSQQ
401: LSNDTCLAYT LAAMSNLLSE MGIASTSGVL GSSYSPVTST ASSLSVQQRV YILLKESLRR ADSLKLRRLV ASNHLAMAKF ELMHVQRPLL SFGPKASMRH
501: KTCPVSVCKE IRLGAHLISD FSSESSTMTI DGSLSSAWLK DLQKPWGPPV ISPDSGSRKS STFFQLCDHL VSIPGSVSQL IGASYLLRAT SWELYGSAPM
601: ARMNTLVYAT LFGDSSSSSD AELAYLKLIQ HLALYKGYKD AFAALKVAEE KFLTVSKSKV LLLKLQLLHE RALHCGNLKL AQRICNELGG LASTAMGVDM
701: ELKVEASLRE ARTLLAAKQY SQAANVAHSL FCTCHKFNLQ IEKASVLLLL AEIHKKSGNA VLGLPYALAS ISFCQSFNLD LLKASATLTL AELWLGLGSN
801: HTKRALDLLH GAFPMILGHG GLELRARAYI FEANCYLSDP SSSVSTDSDT VLDSLRQASD ELQALEYHEL AAEASYLMAM VYDKLGRLDE REEAASLFKK
901: HIIALENPQD VEQNMA
101: DLLNFFNDMR GILGSLDSGV VQDDQIILDP NSNLGMFVRR CILAFNLLSF EGVCHLFSSI EDYCKEAHSS FAQFGAPNNN LESLIQYDQM DMENYAMDKP
201: TEEIEFQKTA SGIVPFHLHT PDSLMKATEG LLHNRKETSR TSKKDTEATP VARASTSTLE ESLVDESLFL RTNLQIQGFL MEQADAIEIH GSSSSFSSSS
301: IESFLDQLQK LAPELHRVHF LRYLNKLHSD DYFAALDNLL RYFDYSAGTE GFDLVPPSTG CSMYGRYEIG LLCLGMMHFR FGHPNLALEV LTEAVRVSQQ
401: LSNDTCLAYT LAAMSNLLSE MGIASTSGVL GSSYSPVTST ASSLSVQQRV YILLKESLRR ADSLKLRRLV ASNHLAMAKF ELMHVQRPLL SFGPKASMRH
501: KTCPVSVCKE IRLGAHLISD FSSESSTMTI DGSLSSAWLK DLQKPWGPPV ISPDSGSRKS STFFQLCDHL VSIPGSVSQL IGASYLLRAT SWELYGSAPM
601: ARMNTLVYAT LFGDSSSSSD AELAYLKLIQ HLALYKGYKD AFAALKVAEE KFLTVSKSKV LLLKLQLLHE RALHCGNLKL AQRICNELGG LASTAMGVDM
701: ELKVEASLRE ARTLLAAKQY SQAANVAHSL FCTCHKFNLQ IEKASVLLLL AEIHKKSGNA VLGLPYALAS ISFCQSFNLD LLKASATLTL AELWLGLGSN
801: HTKRALDLLH GAFPMILGHG GLELRARAYI FEANCYLSDP SSSVSTDSDT VLDSLRQASD ELQALEYHEL AAEASYLMAM VYDKLGRLDE REEAASLFKK
901: HIIALENPQD VEQNMA
Arabidopsis Description
APC5Anaphase-promoting complex subunit 5 [Source:UniProtKB/Swiss-Prot;Acc:Q8H1U4]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.