Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- extracellular 2
- endoplasmic reticulum 3
- vacuole 2
- plasma membrane 3
- golgi 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY06219 | Canola | mitochondrion, plastid | 92.32 | 90.48 |
| CDY10211 | Canola | mitochondrion | 88.59 | 85.22 |
| CDY06653 | Canola | mitochondrion | 87.8 | 85.01 |
| AT1G06590.1 | Thale cress | mitochondrion | 86.55 | 83.62 |
| VIT_02s0012g02000.t01 | Wine grape | cytosol | 20.0 | 70.24 |
| KRH73622 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 26.33 | 69.35 |
| VIT_12s0028g00720.t01 | Wine grape | extracellular | 13.22 | 68.02 |
| KRH14509 | Soybean | extracellular, mitochondrion, plasma membrane, plastid | 63.84 | 61.28 |
| VIT_12s0028g00740.t01 | Wine grape | nucleus | 36.27 | 57.94 |
| Solyc08g067190.2.1 | Tomato | cytosol, plastid | 58.31 | 53.36 |
| HORVU5Hr1G005770.3 | Barley | cytosol | 48.93 | 49.94 |
| Os12t0626300-01 | Rice | cytosol, extracellular, plasma membrane | 50.4 | 48.69 |
| TraesCS5D01G025900.1 | Wheat | cytosol, nucleus, peroxisome | 50.4 | 48.48 |
| TraesCS5B01G017800.1 | Wheat | cytosol | 50.4 | 48.37 |
| GSMUA_Achr9P29220_001 | Banana | nucleus | 50.62 | 48.28 |
| TraesCS5A01G020800.1 | Wheat | cytosol | 50.28 | 48.26 |
| EES02737 | Sorghum | cytosol, nucleus, plasma membrane | 48.14 | 46.76 |
| Zm00001d021235_P001 | Maize | plastid | 1.69 | 17.65 |
Protein Annotations
| EnsemblPlants:CDY09966 | EnsemblPlantsGene:GSBRNA2T00031738001 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0005680 | InterPro:Apc5 | InterPro:Apc5_dom | ncoils:Coil | PANTHER:PTHR12830 | PANTHER:PTHR12830:SF9 |
| PFAM:PF12862 | ProteinID:CDY09966 | ProteinID:CDY09966.1 | SEG:seg | UniParc:UPI0004EDCC7B | UniPathway:UPA00143 |
| UniProt:A0A078F9A9 | MapMan:13.3.4.1.1.1.3 | : | : | : | : |
Description
BnaC08g44850DBnaC08g44850D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F9A9]
Coordinates
chrLK032000:+:267036..273415
Molecular Weight (calculated)
98318.2 Da
IEP (calculated)
6.377
GRAVY (calculated)
-0.022
Length
885 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGLTRIAGA FAVTPHKISV CVLLQIYAPS PQMSLPFPFS SVSQHNRLGL YLLSLTKACD DMYEMKLEEL INQLRELGDD VDAWLTENLT NRFSSLSSPD
101: DLLNFFTDMR GILGSLDSGA VQDDRIVLDH NSNLGMFVRR CILAFNLLSF EGVCHLFSSI EAYCREAHSS SAQYDASNSN LESLTQYDQM DMEIYVMDKA
201: TKEMELHRNA SGSVSFHLHT PEALFKVTEG IPYYSPIYAQ EEFLRISGLL VTRKEKSSTS KFAEATSVAS ASSSKVEDTR VDESLFLRTN LQIQGFLMEK
301: ADAIETHGNS FSSSSIESFL EQLQNLAPEL HRVHFLRYLN KLHSDDYFAA LDNLLRYFDY SAGTEGFDLV PPSTGCSMHG RYEIGLLCLG MMHFRFGHPN
401: LALELSNDTC LAYTLAAMSN LLSEMGIAST TSVLGASYSP VTSTASSLSV QQRVYILLKE SLRRADTLKL KRLVASNHLA MAKFELMHVQ RPLLSFGPKA
501: SMRHKTCPIS VCKEIRLSAH LISDFSSESS KMTIDGSLSS VWLKDLQKPW SASYLIRATS WELYGSAPMA RMNTLVYATL FGDSPSSSDA ELAYLKLIQH
601: LALYKGYKDA FAALKIAEEK FLTVSKSKIL LLKLQLLHEH ALHRGNLKLA QRICNELGGL ASTTMGVDME LKVEASLREA RTLLAAKQYS QAANTAHSLF
701: CTCHKFNLQI EKASVLLLLA EIHKMAGNAV MGLPYALASI SFCQSFNLDL LKASVTLTLA ELWRGLGSNH SKRALDLLHG AFPMILGHGG LELRARAYIF
801: EANCYLSDPS FSVSTDSDTV LDSLRQASDE LQALEYHEFA AEALYLMAMI YDKLGRPEER EEAAALFKKH ITALEIPQNV EPNMA
101: DLLNFFTDMR GILGSLDSGA VQDDRIVLDH NSNLGMFVRR CILAFNLLSF EGVCHLFSSI EAYCREAHSS SAQYDASNSN LESLTQYDQM DMEIYVMDKA
201: TKEMELHRNA SGSVSFHLHT PEALFKVTEG IPYYSPIYAQ EEFLRISGLL VTRKEKSSTS KFAEATSVAS ASSSKVEDTR VDESLFLRTN LQIQGFLMEK
301: ADAIETHGNS FSSSSIESFL EQLQNLAPEL HRVHFLRYLN KLHSDDYFAA LDNLLRYFDY SAGTEGFDLV PPSTGCSMHG RYEIGLLCLG MMHFRFGHPN
401: LALELSNDTC LAYTLAAMSN LLSEMGIAST TSVLGASYSP VTSTASSLSV QQRVYILLKE SLRRADTLKL KRLVASNHLA MAKFELMHVQ RPLLSFGPKA
501: SMRHKTCPIS VCKEIRLSAH LISDFSSESS KMTIDGSLSS VWLKDLQKPW SASYLIRATS WELYGSAPMA RMNTLVYATL FGDSPSSSDA ELAYLKLIQH
601: LALYKGYKDA FAALKIAEEK FLTVSKSKIL LLKLQLLHEH ALHRGNLKLA QRICNELGGL ASTTMGVDME LKVEASLREA RTLLAAKQYS QAANTAHSLF
701: CTCHKFNLQI EKASVLLLLA EIHKMAGNAV MGLPYALASI SFCQSFNLDL LKASVTLTLA ELWRGLGSNH SKRALDLLHG AFPMILGHGG LELRARAYIF
801: EANCYLSDPS FSVSTDSDTV LDSLRQASDE LQALEYHEFA AEALYLMAMI YDKLGRPEER EEAAALFKKH ITALEIPQNV EPNMA
001: MAGLTRTAGA FAVTPHKISV CILLQIYAPS AQMSLPFPFS SVAQHNRLGL YLLSLTKSCD DIFEPKLEKL INQLREVGEE MDAWLTDHLT NRFSSLASPD
101: DLLNFFNDMR GILGSLDSGV VQDDQIILDP NSNLGMFVRR CILAFNLLSF EGVCHLFSSI EDYCKEAHSS FAQFGAPNNN LESLIQYDQM DMENYAMDKP
201: TEEIEFQKTA SGIVPFHLHT PDSLMKATEG LLHNRKETSR TSKKDTEATP VARASTSTLE ESLVDESLFL RTNLQIQGFL MEQADAIEIH GSSSSFSSSS
301: IESFLDQLQK LAPELHRVHF LRYLNKLHSD DYFAALDNLL RYFDYSAGTE GFDLVPPSTG CSMYGRYEIG LLCLGMMHFR FGHPNLALEV LTEAVRVSQQ
401: LSNDTCLAYT LAAMSNLLSE MGIASTSGVL GSSYSPVTST ASSLSVQQRV YILLKESLRR ADSLKLRRLV ASNHLAMAKF ELMHVQRPLL SFGPKASMRH
501: KTCPVSVCKE IRLGAHLISD FSSESSTMTI DGSLSSAWLK DLQKPWGPPV ISPDSGSRKS STFFQLCDHL VSIPGSVSQL IGASYLLRAT SWELYGSAPM
601: ARMNTLVYAT LFGDSSSSSD AELAYLKLIQ HLALYKGYKD AFAALKVAEE KFLTVSKSKV LLLKLQLLHE RALHCGNLKL AQRICNELGG LASTAMGVDM
701: ELKVEASLRE ARTLLAAKQY SQAANVAHSL FCTCHKFNLQ IEKASVLLLL AEIHKKSGNA VLGLPYALAS ISFCQSFNLD LLKASATLTL AELWLGLGSN
801: HTKRALDLLH GAFPMILGHG GLELRARAYI FEANCYLSDP SSSVSTDSDT VLDSLRQASD ELQALEYHEL AAEASYLMAM VYDKLGRLDE REEAASLFKK
901: HIIALENPQD VEQNMA
101: DLLNFFNDMR GILGSLDSGV VQDDQIILDP NSNLGMFVRR CILAFNLLSF EGVCHLFSSI EDYCKEAHSS FAQFGAPNNN LESLIQYDQM DMENYAMDKP
201: TEEIEFQKTA SGIVPFHLHT PDSLMKATEG LLHNRKETSR TSKKDTEATP VARASTSTLE ESLVDESLFL RTNLQIQGFL MEQADAIEIH GSSSSFSSSS
301: IESFLDQLQK LAPELHRVHF LRYLNKLHSD DYFAALDNLL RYFDYSAGTE GFDLVPPSTG CSMYGRYEIG LLCLGMMHFR FGHPNLALEV LTEAVRVSQQ
401: LSNDTCLAYT LAAMSNLLSE MGIASTSGVL GSSYSPVTST ASSLSVQQRV YILLKESLRR ADSLKLRRLV ASNHLAMAKF ELMHVQRPLL SFGPKASMRH
501: KTCPVSVCKE IRLGAHLISD FSSESSTMTI DGSLSSAWLK DLQKPWGPPV ISPDSGSRKS STFFQLCDHL VSIPGSVSQL IGASYLLRAT SWELYGSAPM
601: ARMNTLVYAT LFGDSSSSSD AELAYLKLIQ HLALYKGYKD AFAALKVAEE KFLTVSKSKV LLLKLQLLHE RALHCGNLKL AQRICNELGG LASTAMGVDM
701: ELKVEASLRE ARTLLAAKQY SQAANVAHSL FCTCHKFNLQ IEKASVLLLL AEIHKKSGNA VLGLPYALAS ISFCQSFNLD LLKASATLTL AELWLGLGSN
801: HTKRALDLLH GAFPMILGHG GLELRARAYI FEANCYLSDP SSSVSTDSDT VLDSLRQASD ELQALEYHEL AAEASYLMAM VYDKLGRLDE REEAASLFKK
901: HIIALENPQD VEQNMA
Arabidopsis Description
APC5Anaphase-promoting complex subunit 5 [Source:UniProtKB/Swiss-Prot;Acc:Q8H1U4]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.