Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G017800.1 | Wheat | cytosol | 96.1 | 96.1 |
| TraesCS5D01G025900.1 | Wheat | cytosol, nucleus, peroxisome | 95.66 | 95.87 |
| HORVU5Hr1G005770.3 | Barley | cytosol | 89.26 | 94.92 |
| Os12t0626300-01 | Rice | cytosol, extracellular, plasma membrane | 83.51 | 84.06 |
| EES02737 | Sorghum | cytosol, nucleus, plasma membrane | 81.56 | 82.55 |
| Zm00001d040342_P001 | Maize | cytosol | 81.24 | 82.49 |
| VIT_02s0012g02000.t01 | Wine grape | cytosol | 18.55 | 67.86 |
| KRH73622 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 24.08 | 66.07 |
| VIT_12s0028g00720.t01 | Wine grape | extracellular | 12.04 | 64.53 |
| GSMUA_Achr9P29220_001 | Banana | nucleus | 63.45 | 63.04 |
| VIT_12s0028g00740.t01 | Wine grape | nucleus | 34.27 | 57.04 |
| KRH14509 | Soybean | extracellular, mitochondrion, plasma membrane, plastid | 52.82 | 52.82 |
| Bra015512.1-P | Field mustard | mitochondrion | 50.54 | 50.98 |
| AT1G06590.1 | Thale cress | mitochondrion | 50.65 | 50.98 |
| CDY06653 | Canola | mitochondrion | 50.33 | 50.77 |
| CDY06219 | Canola | mitochondrion, plastid | 49.67 | 50.72 |
| CDY10211 | Canola | mitochondrion | 50.43 | 50.54 |
| Bra032414.1-P | Field mustard | mitochondrion, plastid | 49.89 | 50.49 |
| CDY09966 | Canola | mitochondrion, plastid | 48.26 | 50.28 |
| Solyc08g067190.2.1 | Tomato | cytosol, plastid | 52.06 | 49.64 |
| VIT_12s0028g00810.t01 | Wine grape | plastid | 12.15 | 41.48 |
Protein Annotations
| EnsemblPlants:TraesCS5A01G020800.1 | EnsemblPlantsGene:TraesCS5A01G020800 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0005680 | InterPro:Apc5 | InterPro:Apc5_dom | PANTHER:PTHR12830 | PANTHER:PTHR12830:SF9 | PFAM:PF12862 |
| SEG:seg | TIGR:cd16270 | MapMan:13.3.4.1.1.1.3 | : | : | : |
Description
No Description!
Coordinates
chr5A:-:16980676..16987625
Molecular Weight (calculated)
101069.0 Da
IEP (calculated)
5.379
GRAVY (calculated)
-0.058
Length
922 amino acids
Sequence
(BLAST)
(BLAST)
001: MNVFAGVGGS AGEGAGAGAA AAARDAGSAD FGALLELTPH KMAVCHLVQV FAPPAQQQHQ APPFPFDSVA HHNRLGLFLF ALTRSCEDFL EPPLEELLRQ
101: LKAVDDLVNG WLCEQLTTTL AGLNSPDDLF NFFDKLRGVL TSPDGGSVED EFLDPNSQLG VFLRCCILAF NSMTFEGVCH LLANLVAYCN SAEASYDLAE
201: DEDFNGEIEM GDPMDADIGV RSGVFDRYTQ GYATESHMGE SSSSLIHAPI SLHNFDEADI FKAEDNPTCL RSRWQLEAFL NQQADVLEKD PSSVPLNSFN
301: NTMAQLQTLA PELHRVQFLQ YLNALCHDDY VASLDHLHRY FDYSAGMQGL FSRSSSPHQD NIVGKYESAL LCLGNLHCYF GHPKKALEAF TEAVRVSQMN
401: NDDSCLAYIL GAISNLLSKI GISSTVGLIG SRYSLGNNIG LGTPLSIQQQ LLVLLKRSLK RADMLKLTSL LSFDHISLAK FDLKHVQRPL VSFGPNGSTK
501: LRTCPADVCK NLRLSSHVLS DFGADGLSIS SDNGSFSTSW LKNLSDASSS WCSSSTKPRK FITNDFDNFH FHAQPSSIPT SVLQLAGSAY LMRATAWEHY
601: GSAPMVRMNT LVYATCFADA ASSSELSLAY VKLIEQLAVF KGYSAAFCAL KLAEEKFPSS TNSQIHLLKM QLLHERALHR GHLRIAQQIG DEFGVLSSSV
701: SGVDIELKTE ASLRRARTLL AAKQFSQAAA VANSLFTTCY KYNMQVENAS VLLLLAEIHR KSDNAVLGLT YALASQSFCK SFNLDLLEAS ATLTLAELWL
801: ALGSNHAKRA LSLVYQSLPM ILGHGGLELR ARSQIVLAKC HLTDPEFSVS EDPCAVLDPL NQAAEDLQVL EYHEMAAEVY YLKAMTYNHL GKEYEREEAA
901: ARFKEHVTAL ENPRDEEDSL VY
101: LKAVDDLVNG WLCEQLTTTL AGLNSPDDLF NFFDKLRGVL TSPDGGSVED EFLDPNSQLG VFLRCCILAF NSMTFEGVCH LLANLVAYCN SAEASYDLAE
201: DEDFNGEIEM GDPMDADIGV RSGVFDRYTQ GYATESHMGE SSSSLIHAPI SLHNFDEADI FKAEDNPTCL RSRWQLEAFL NQQADVLEKD PSSVPLNSFN
301: NTMAQLQTLA PELHRVQFLQ YLNALCHDDY VASLDHLHRY FDYSAGMQGL FSRSSSPHQD NIVGKYESAL LCLGNLHCYF GHPKKALEAF TEAVRVSQMN
401: NDDSCLAYIL GAISNLLSKI GISSTVGLIG SRYSLGNNIG LGTPLSIQQQ LLVLLKRSLK RADMLKLTSL LSFDHISLAK FDLKHVQRPL VSFGPNGSTK
501: LRTCPADVCK NLRLSSHVLS DFGADGLSIS SDNGSFSTSW LKNLSDASSS WCSSSTKPRK FITNDFDNFH FHAQPSSIPT SVLQLAGSAY LMRATAWEHY
601: GSAPMVRMNT LVYATCFADA ASSSELSLAY VKLIEQLAVF KGYSAAFCAL KLAEEKFPSS TNSQIHLLKM QLLHERALHR GHLRIAQQIG DEFGVLSSSV
701: SGVDIELKTE ASLRRARTLL AAKQFSQAAA VANSLFTTCY KYNMQVENAS VLLLLAEIHR KSDNAVLGLT YALASQSFCK SFNLDLLEAS ATLTLAELWL
801: ALGSNHAKRA LSLVYQSLPM ILGHGGLELR ARSQIVLAKC HLTDPEFSVS EDPCAVLDPL NQAAEDLQVL EYHEMAAEVY YLKAMTYNHL GKEYEREEAA
901: ARFKEHVTAL ENPRDEEDSL VY
001: MAGLTRTAGA FAVTPHKISV CILLQIYAPS AQMSLPFPFS SVAQHNRLGL YLLSLTKSCD DIFEPKLEKL INQLREVGEE MDAWLTDHLT NRFSSLASPD
101: DLLNFFNDMR GILGSLDSGV VQDDQIILDP NSNLGMFVRR CILAFNLLSF EGVCHLFSSI EDYCKEAHSS FAQFGAPNNN LESLIQYDQM DMENYAMDKP
201: TEEIEFQKTA SGIVPFHLHT PDSLMKATEG LLHNRKETSR TSKKDTEATP VARASTSTLE ESLVDESLFL RTNLQIQGFL MEQADAIEIH GSSSSFSSSS
301: IESFLDQLQK LAPELHRVHF LRYLNKLHSD DYFAALDNLL RYFDYSAGTE GFDLVPPSTG CSMYGRYEIG LLCLGMMHFR FGHPNLALEV LTEAVRVSQQ
401: LSNDTCLAYT LAAMSNLLSE MGIASTSGVL GSSYSPVTST ASSLSVQQRV YILLKESLRR ADSLKLRRLV ASNHLAMAKF ELMHVQRPLL SFGPKASMRH
501: KTCPVSVCKE IRLGAHLISD FSSESSTMTI DGSLSSAWLK DLQKPWGPPV ISPDSGSRKS STFFQLCDHL VSIPGSVSQL IGASYLLRAT SWELYGSAPM
601: ARMNTLVYAT LFGDSSSSSD AELAYLKLIQ HLALYKGYKD AFAALKVAEE KFLTVSKSKV LLLKLQLLHE RALHCGNLKL AQRICNELGG LASTAMGVDM
701: ELKVEASLRE ARTLLAAKQY SQAANVAHSL FCTCHKFNLQ IEKASVLLLL AEIHKKSGNA VLGLPYALAS ISFCQSFNLD LLKASATLTL AELWLGLGSN
801: HTKRALDLLH GAFPMILGHG GLELRARAYI FEANCYLSDP SSSVSTDSDT VLDSLRQASD ELQALEYHEL AAEASYLMAM VYDKLGRLDE REEAASLFKK
901: HIIALENPQD VEQNMA
101: DLLNFFNDMR GILGSLDSGV VQDDQIILDP NSNLGMFVRR CILAFNLLSF EGVCHLFSSI EDYCKEAHSS FAQFGAPNNN LESLIQYDQM DMENYAMDKP
201: TEEIEFQKTA SGIVPFHLHT PDSLMKATEG LLHNRKETSR TSKKDTEATP VARASTSTLE ESLVDESLFL RTNLQIQGFL MEQADAIEIH GSSSSFSSSS
301: IESFLDQLQK LAPELHRVHF LRYLNKLHSD DYFAALDNLL RYFDYSAGTE GFDLVPPSTG CSMYGRYEIG LLCLGMMHFR FGHPNLALEV LTEAVRVSQQ
401: LSNDTCLAYT LAAMSNLLSE MGIASTSGVL GSSYSPVTST ASSLSVQQRV YILLKESLRR ADSLKLRRLV ASNHLAMAKF ELMHVQRPLL SFGPKASMRH
501: KTCPVSVCKE IRLGAHLISD FSSESSTMTI DGSLSSAWLK DLQKPWGPPV ISPDSGSRKS STFFQLCDHL VSIPGSVSQL IGASYLLRAT SWELYGSAPM
601: ARMNTLVYAT LFGDSSSSSD AELAYLKLIQ HLALYKGYKD AFAALKVAEE KFLTVSKSKV LLLKLQLLHE RALHCGNLKL AQRICNELGG LASTAMGVDM
701: ELKVEASLRE ARTLLAAKQY SQAANVAHSL FCTCHKFNLQ IEKASVLLLL AEIHKKSGNA VLGLPYALAS ISFCQSFNLD LLKASATLTL AELWLGLGSN
801: HTKRALDLLH GAFPMILGHG GLELRARAYI FEANCYLSDP SSSVSTDSDT VLDSLRQASD ELQALEYHEL AAEASYLMAM VYDKLGRLDE REEAASLFKK
901: HIIALENPQD VEQNMA
Arabidopsis Description
APC5Anaphase-promoting complex subunit 5 [Source:UniProtKB/Swiss-Prot;Acc:Q8H1U4]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.