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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, nucleus, cytosol

Predictor Summary:
  • nucleus 3
  • cytosol 1
  • mitochondrion 1
  • plasma membrane 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d040342_P001 Maize cytosol 94.4 94.71
HORVU5Hr1G005770.3 Barley cytosol 79.8 83.85
Os12t0626300-01 Rice cytosol, extracellular, plasma membrane 83.64 83.19
TraesCS5D01G025900.1 Wheat cytosol, nucleus, peroxisome 83.42 82.61
TraesCS5B01G017800.1 Wheat cytosol 83.21 82.21
TraesCS5A01G020800.1 Wheat cytosol 82.55 81.56
VIT_02s0012g02000.t01 Wine grape cytosol 18.88 68.25
VIT_12s0028g00720.t01 Wine grape extracellular 12.73 67.44
KRH73622 Soybean endoplasmic reticulum, extracellular, plasma membrane 24.48 66.37
GSMUA_Achr9P29220_001 Banana nucleus 63.78 62.61
VIT_12s0028g00740.t01 Wine grape nucleus 33.48 55.05
KRH14509 Soybean extracellular, mitochondrion, plasma membrane, plastid 51.59 50.98
Bra015512.1-P Field mustard mitochondrion 49.07 48.91
CDY06653 Canola mitochondrion 48.96 48.8
CDY10211 Canola mitochondrion 49.18 48.7
AT1G06590.1 Thale cress mitochondrion 48.85 48.58
CDY09966 Canola mitochondrion, plastid 46.76 48.14
CDY06219 Canola mitochondrion, plastid 47.53 47.95
Solyc08g067190.2.1 Tomato cytosol, plastid 50.82 47.88
Bra032414.1-P Field mustard mitochondrion, plastid 47.86 47.86
VIT_12s0028g00810.t01 Wine grape plastid 11.09 37.41
Protein Annotations
EnsemblPlants:EES02737EnsemblPlantsGene:SORBI_3003G123100EntrezGene:8054623GO:GO:0003674GO:GO:0005488GO:GO:0005515
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0005680InterPro:Apc5
InterPro:Apc5_domPANTHER:PTHR12830PANTHER:PTHR12830:SF9PFAM:PF12862ProteinID:EES02737ProteinID:EES02737.1
RefSeq:XP_002457617.1SEG:segUniParc:UPI0001A84EA7UniProt:C5XGJ0MapMan:13.3.4.1.1.1.3:
Description
hypothetical protein
Coordinates
chr3:-:11181915..11189922
Molecular Weight (calculated)
99636.0 Da
IEP (calculated)
5.763
GRAVY (calculated)
0.020
Length
911 amino acids
Sequence
(BLAST)
001: MSLFAGVGGG AADAASGGGT GRALLELTPH KMAVCHLVQV FAPPAQAGGD VVPPFPFESL AHHNRLGLFL FTLTRSCEDF LEPPLEEFLR QLKAVDDLAN
101: GWFCEQLTSS LSALISPDDL FNFFDKLQGV LTASEGASAE DVFLDPNSQL GVFLRCCILA FNSMTFEGVC HLLADLVMYC NSTDASYDLA EDEDFNSEMG
201: NLMDADIGSQ VGIFDKFHQG YASERHMGES SSALIRAPMS TNDFDDANIF KADGNPTCLR SRWQLEAYLN QQADILEKDP GSVPLNSFNA TMTQLQTLAP
301: ELHRVQFLQY LNALCHDDYV ASLDNLHRYF DYSAGMQGLF GRSVAQVQDI VVGKYESALL CLGNLHCYFG HPKKALEAFA EAVRVSQMNN DDSCLAYVLG
401: AISNLLSKIG ISNTVGIITS PYSLGTNIGL GTPLSIQQQL LVLLKRSLKR ADALKLPSLL SFDHLLLAKF DLKHVQRPLV SFGPNASTKL RTCPADVIKN
501: LRLGSRVLTD FGADVLSTSN DNGSFSTSWL RNLSATSDSW RRSSMNTKKL HINDFDNFHY HAQPSPVPAP ILQLAGSACL LRATAWEHYG SAPMVRMNAL
601: VYATCFADAA SSSELSLAYV KLIQQLAVFK GYSAAFCALK LAEKKFPSST SLHIQLLGMQ ILHERALHRG HLKVAQQICD EFGVLSSSVS GVDIELKTEF
701: SVRRARTLLA AKQFSQAAAV ANSLFSTCYK YNMQVENASI LLLLAEIHKK SDNAILGLPY ALASQSFCKS FNLDLLEASA TLTLAELWLA LGSSHAKKAL
801: SLVYQSLPMI LGHGGLELRA RAHIVLAKCH LADPKFSVLE DPEAVLDPLN QATEDLQALE YHEMAAEAYY LKAMAYNHLG KLDEREEAAA RFKDHVTALE
901: NPQNEEDSLA Y
Best Arabidopsis Sequence Match ( AT1G06590.1 )
(BLAST)
001: MAGLTRTAGA FAVTPHKISV CILLQIYAPS AQMSLPFPFS SVAQHNRLGL YLLSLTKSCD DIFEPKLEKL INQLREVGEE MDAWLTDHLT NRFSSLASPD
101: DLLNFFNDMR GILGSLDSGV VQDDQIILDP NSNLGMFVRR CILAFNLLSF EGVCHLFSSI EDYCKEAHSS FAQFGAPNNN LESLIQYDQM DMENYAMDKP
201: TEEIEFQKTA SGIVPFHLHT PDSLMKATEG LLHNRKETSR TSKKDTEATP VARASTSTLE ESLVDESLFL RTNLQIQGFL MEQADAIEIH GSSSSFSSSS
301: IESFLDQLQK LAPELHRVHF LRYLNKLHSD DYFAALDNLL RYFDYSAGTE GFDLVPPSTG CSMYGRYEIG LLCLGMMHFR FGHPNLALEV LTEAVRVSQQ
401: LSNDTCLAYT LAAMSNLLSE MGIASTSGVL GSSYSPVTST ASSLSVQQRV YILLKESLRR ADSLKLRRLV ASNHLAMAKF ELMHVQRPLL SFGPKASMRH
501: KTCPVSVCKE IRLGAHLISD FSSESSTMTI DGSLSSAWLK DLQKPWGPPV ISPDSGSRKS STFFQLCDHL VSIPGSVSQL IGASYLLRAT SWELYGSAPM
601: ARMNTLVYAT LFGDSSSSSD AELAYLKLIQ HLALYKGYKD AFAALKVAEE KFLTVSKSKV LLLKLQLLHE RALHCGNLKL AQRICNELGG LASTAMGVDM
701: ELKVEASLRE ARTLLAAKQY SQAANVAHSL FCTCHKFNLQ IEKASVLLLL AEIHKKSGNA VLGLPYALAS ISFCQSFNLD LLKASATLTL AELWLGLGSN
801: HTKRALDLLH GAFPMILGHG GLELRARAYI FEANCYLSDP SSSVSTDSDT VLDSLRQASD ELQALEYHEL AAEASYLMAM VYDKLGRLDE REEAASLFKK
901: HIIALENPQD VEQNMA
Arabidopsis Description
APC5Anaphase-promoting complex subunit 5 [Source:UniProtKB/Swiss-Prot;Acc:Q8H1U4]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.