Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU5Hr1G005770.3 | Barley | cytosol | 90.76 | 96.31 |
| TraesCS5B01G017800.1 | Wheat | cytosol | 96.09 | 95.88 |
| TraesCS5A01G020800.1 | Wheat | cytosol | 95.87 | 95.66 |
| Os12t0626300-01 | Rice | cytosol, extracellular, plasma membrane | 84.78 | 85.15 |
| EES02737 | Sorghum | cytosol, nucleus, plasma membrane | 82.61 | 83.42 |
| Zm00001d040342_P001 | Maize | cytosol | 82.28 | 83.37 |
| VIT_02s0012g02000.t01 | Wine grape | cytosol | 18.8 | 68.65 |
| KRH73622 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 24.35 | 66.67 |
| VIT_12s0028g00720.t01 | Wine grape | extracellular | 12.17 | 65.12 |
| GSMUA_Achr9P29220_001 | Banana | nucleus | 64.13 | 63.58 |
| VIT_12s0028g00740.t01 | Wine grape | nucleus | 34.57 | 57.4 |
| KRH14509 | Soybean | extracellular, mitochondrion, plasma membrane, plastid | 53.26 | 53.15 |
| AT1G06590.1 | Thale cress | mitochondrion | 50.76 | 50.98 |
| Bra015512.1-P | Field mustard | mitochondrion | 50.54 | 50.88 |
| CDY06653 | Canola | mitochondrion | 50.33 | 50.66 |
| CDY06219 | Canola | mitochondrion, plastid | 49.67 | 50.61 |
| CDY10211 | Canola | mitochondrion | 50.43 | 50.43 |
| CDY09966 | Canola | mitochondrion, plastid | 48.48 | 50.4 |
| Bra032414.1-P | Field mustard | mitochondrion, plastid | 49.89 | 50.38 |
| Solyc08g067190.2.1 | Tomato | cytosol, plastid | 52.17 | 49.64 |
| VIT_12s0028g00810.t01 | Wine grape | plastid | 12.28 | 41.85 |
Protein Annotations
| EnsemblPlants:TraesCS5D01G025900.1 | EnsemblPlantsGene:TraesCS5D01G025900 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0005680 | InterPro:Apc5 | InterPro:Apc5_dom | PANTHER:PTHR12830 | PANTHER:PTHR12830:SF9 | PFAM:PF12862 |
| SEG:seg | TIGR:cd16270 | MapMan:13.3.4.1.1.1.3 | : | : | : |
Description
No Description!
Coordinates
chr5D:-:23076135..23084006
Molecular Weight (calculated)
101155.0 Da
IEP (calculated)
5.452
GRAVY (calculated)
-0.079
Length
920 amino acids
Sequence
(BLAST)
(BLAST)
001: MNVFAGVGGS AGEGGGAGAG TGPAARDADF GALLELTPHK MAVCHLVQVF APPAQQQQAP PFPFDSVAHH NRLGLFLFAL TRSCEDFLEP PLEQLLRQLK
101: AIDDLVNGWL CEQLTTTLAG LNSPDDLFNF FDKLRGVLTS PEGGNVEDEF LDPNSQLGVF LRCCILAFNS MTFEGVCHLL ANLVAYCNSA DASYDLAEDE
201: DFNGEIEMSD PMDADIGVRS GVFDRYTQGY ATESHMGESS SSLIHAPISL HNFDEADIFK AEDNPTCLRS RWQLEAYLNQ QADVLEKDPS SVPLNSFNNT
301: MTQLQTLAPE LHRVQFLQYL NALCHDDYVA SLDHLHRYFD YSAGMQGLFS RSLSPHQDNI VGKYESALLC LGNLHCYFGH PKKALEAFTE AVRVSQMNND
401: DSCLAYILGA ISNLLSKIGI SSTVGLIGSR YSLGNNIGLG TPLSIQQQLL VLLKRSLKRA DMLKLTSLLS FDHISLAKFD LKHVQRPLVS FGPNGSTKLR
501: TCPADVCKNL RLSSHVLSDF GTDGLSIAND NGSFSTSWLR NLSDASSSWR SSSTKPRKLI TNDFDNFHFH AQPSPIPTSV LQLAGSAYLM RATAWEHYGS
601: APMVRMNTLV YATCFADAAS SSELSLAYVK LIEQLAVFKG YSAAFCALKL AEEKFPSSTN SQIHLLKMQL LHERALHRGH LRIAQQICDE FGVLSSSVSG
701: VDIELKTEAS LRRARTLLAA KQFSQAAAVA NSLFTTCYKY NMQVENASVL LLLAEIHRKS DNAVLGLPYA LASQSFCKSF NLDLLEASAT LTLAELWLAL
801: GSNHAKRALS LVYQSLPMIL GHGGLELRAR SQIVLAKCHL TDPEFSVSED PCAVLDPLNQ AAEDLQVLEY HEMAAEVYYL KAMTYNHLGK EYEREEAAAR
901: FKEHVTALEN PRDEEDSLVY
101: AIDDLVNGWL CEQLTTTLAG LNSPDDLFNF FDKLRGVLTS PEGGNVEDEF LDPNSQLGVF LRCCILAFNS MTFEGVCHLL ANLVAYCNSA DASYDLAEDE
201: DFNGEIEMSD PMDADIGVRS GVFDRYTQGY ATESHMGESS SSLIHAPISL HNFDEADIFK AEDNPTCLRS RWQLEAYLNQ QADVLEKDPS SVPLNSFNNT
301: MTQLQTLAPE LHRVQFLQYL NALCHDDYVA SLDHLHRYFD YSAGMQGLFS RSLSPHQDNI VGKYESALLC LGNLHCYFGH PKKALEAFTE AVRVSQMNND
401: DSCLAYILGA ISNLLSKIGI SSTVGLIGSR YSLGNNIGLG TPLSIQQQLL VLLKRSLKRA DMLKLTSLLS FDHISLAKFD LKHVQRPLVS FGPNGSTKLR
501: TCPADVCKNL RLSSHVLSDF GTDGLSIAND NGSFSTSWLR NLSDASSSWR SSSTKPRKLI TNDFDNFHFH AQPSPIPTSV LQLAGSAYLM RATAWEHYGS
601: APMVRMNTLV YATCFADAAS SSELSLAYVK LIEQLAVFKG YSAAFCALKL AEEKFPSSTN SQIHLLKMQL LHERALHRGH LRIAQQICDE FGVLSSSVSG
701: VDIELKTEAS LRRARTLLAA KQFSQAAAVA NSLFTTCYKY NMQVENASVL LLLAEIHRKS DNAVLGLPYA LASQSFCKSF NLDLLEASAT LTLAELWLAL
801: GSNHAKRALS LVYQSLPMIL GHGGLELRAR SQIVLAKCHL TDPEFSVSED PCAVLDPLNQ AAEDLQVLEY HEMAAEVYYL KAMTYNHLGK EYEREEAAAR
901: FKEHVTALEN PRDEEDSLVY
001: MAGLTRTAGA FAVTPHKISV CILLQIYAPS AQMSLPFPFS SVAQHNRLGL YLLSLTKSCD DIFEPKLEKL INQLREVGEE MDAWLTDHLT NRFSSLASPD
101: DLLNFFNDMR GILGSLDSGV VQDDQIILDP NSNLGMFVRR CILAFNLLSF EGVCHLFSSI EDYCKEAHSS FAQFGAPNNN LESLIQYDQM DMENYAMDKP
201: TEEIEFQKTA SGIVPFHLHT PDSLMKATEG LLHNRKETSR TSKKDTEATP VARASTSTLE ESLVDESLFL RTNLQIQGFL MEQADAIEIH GSSSSFSSSS
301: IESFLDQLQK LAPELHRVHF LRYLNKLHSD DYFAALDNLL RYFDYSAGTE GFDLVPPSTG CSMYGRYEIG LLCLGMMHFR FGHPNLALEV LTEAVRVSQQ
401: LSNDTCLAYT LAAMSNLLSE MGIASTSGVL GSSYSPVTST ASSLSVQQRV YILLKESLRR ADSLKLRRLV ASNHLAMAKF ELMHVQRPLL SFGPKASMRH
501: KTCPVSVCKE IRLGAHLISD FSSESSTMTI DGSLSSAWLK DLQKPWGPPV ISPDSGSRKS STFFQLCDHL VSIPGSVSQL IGASYLLRAT SWELYGSAPM
601: ARMNTLVYAT LFGDSSSSSD AELAYLKLIQ HLALYKGYKD AFAALKVAEE KFLTVSKSKV LLLKLQLLHE RALHCGNLKL AQRICNELGG LASTAMGVDM
701: ELKVEASLRE ARTLLAAKQY SQAANVAHSL FCTCHKFNLQ IEKASVLLLL AEIHKKSGNA VLGLPYALAS ISFCQSFNLD LLKASATLTL AELWLGLGSN
801: HTKRALDLLH GAFPMILGHG GLELRARAYI FEANCYLSDP SSSVSTDSDT VLDSLRQASD ELQALEYHEL AAEASYLMAM VYDKLGRLDE REEAASLFKK
901: HIIALENPQD VEQNMA
101: DLLNFFNDMR GILGSLDSGV VQDDQIILDP NSNLGMFVRR CILAFNLLSF EGVCHLFSSI EDYCKEAHSS FAQFGAPNNN LESLIQYDQM DMENYAMDKP
201: TEEIEFQKTA SGIVPFHLHT PDSLMKATEG LLHNRKETSR TSKKDTEATP VARASTSTLE ESLVDESLFL RTNLQIQGFL MEQADAIEIH GSSSSFSSSS
301: IESFLDQLQK LAPELHRVHF LRYLNKLHSD DYFAALDNLL RYFDYSAGTE GFDLVPPSTG CSMYGRYEIG LLCLGMMHFR FGHPNLALEV LTEAVRVSQQ
401: LSNDTCLAYT LAAMSNLLSE MGIASTSGVL GSSYSPVTST ASSLSVQQRV YILLKESLRR ADSLKLRRLV ASNHLAMAKF ELMHVQRPLL SFGPKASMRH
501: KTCPVSVCKE IRLGAHLISD FSSESSTMTI DGSLSSAWLK DLQKPWGPPV ISPDSGSRKS STFFQLCDHL VSIPGSVSQL IGASYLLRAT SWELYGSAPM
601: ARMNTLVYAT LFGDSSSSSD AELAYLKLIQ HLALYKGYKD AFAALKVAEE KFLTVSKSKV LLLKLQLLHE RALHCGNLKL AQRICNELGG LASTAMGVDM
701: ELKVEASLRE ARTLLAAKQY SQAANVAHSL FCTCHKFNLQ IEKASVLLLL AEIHKKSGNA VLGLPYALAS ISFCQSFNLD LLKASATLTL AELWLGLGSN
801: HTKRALDLLH GAFPMILGHG GLELRARAYI FEANCYLSDP SSSVSTDSDT VLDSLRQASD ELQALEYHEL AAEASYLMAM VYDKLGRLDE REEAASLFKK
901: HIIALENPQD VEQNMA
Arabidopsis Description
APC5Anaphase-promoting complex subunit 5 [Source:UniProtKB/Swiss-Prot;Acc:Q8H1U4]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.