Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
KRH14509 | Soybean | extracellular, mitochondrion, plasma membrane, plastid | 72.02 | 43.28 |
KRH73622 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 25.27 | 41.67 |
Solyc08g067190.2.1 | Tomato | cytosol, plastid | 70.22 | 40.23 |
AT1G06590.1 | Thale cress | mitochondrion | 64.08 | 38.76 |
Bra015512.1-P | Field mustard | mitochondrion | 63.36 | 38.4 |
CDY06653 | Canola | mitochondrion | 63.36 | 38.4 |
CDY10211 | Canola | mitochondrion | 63.54 | 38.26 |
CDY06219 | Canola | mitochondrion, plastid | 61.73 | 37.87 |
Bra032414.1-P | Field mustard | mitochondrion, plastid | 61.73 | 37.54 |
GSMUA_Achr9P29220_001 | Banana | nucleus | 61.91 | 36.96 |
CDY09966 | Canola | mitochondrion, plastid | 57.94 | 36.27 |
HORVU5Hr1G005770.3 | Barley | cytosol | 56.5 | 36.1 |
Os12t0626300-01 | Rice | cytosol, extracellular, plasma membrane | 57.58 | 34.83 |
TraesCS5D01G025900.1 | Wheat | cytosol, nucleus, peroxisome | 57.4 | 34.57 |
TraesCS5A01G020800.1 | Wheat | cytosol | 57.04 | 34.27 |
TraesCS5B01G017800.1 | Wheat | cytosol | 56.86 | 34.16 |
EES02737 | Sorghum | cytosol, nucleus, plasma membrane | 55.05 | 33.48 |
VIT_02s0012g02000.t01 | Wine grape | cytosol | 14.08 | 30.95 |
Zm00001d021235_P001 | Maize | plastid | 2.71 | 17.65 |
VIT_12s0028g00810.t01 | Wine grape | plastid | 4.15 | 8.52 |
VIT_12s0028g00720.t01 | Wine grape | extracellular | 0.54 | 1.74 |
Protein Annotations
ArrayExpress:VIT_12s0028g00740 | EMBL:FN595235 | EnsemblPlants:VIT_12s0028g00740.t01 | EnsemblPlantsGene:VIT_12s0028g00740 | GO:GO:0003674 | GO:GO:0003676 |
GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005680 |
InterPro:Apc5 | InterPro:Apc5_dom | PANTHER:PTHR12830 | PANTHER:PTHR12830:SF9 | PFAM:PF12862 | ProteinID:CCB47452 |
ProteinID:CCB47452.1 | SEG:seg | UniParc:UPI0002109D8E | UniProt:F6H584 | MapMan:13.3.4.1.1.1.3 | : |
Description
No Description!
Coordinates
chr12:-:1283670..1320715
Molecular Weight (calculated)
61128.0 Da
IEP (calculated)
8.940
GRAVY (calculated)
0.041
Length
554 amino acids
Sequence
(BLAST)
(BLAST)
001: MKCGNFRQVL QSTDIEVSAE LKFKHREKTG EASSFAHHMK DTLRGIDPNG GIFLRTNWQI QGYLCEQADA IEKHSCSFPL NAFESILRQL QKLAPELHRV
101: HFLRYLNNLY HNDYPASLEN LHCYFDYSAG AEGFDFVQPT SSASNSFGRY EIALLCLGMM HFHFGHPKQA LEVLTEAVRV SQQQSNDTCL AYTLAAICNL
201: LSAIGISSTT EILGSSYGPV TSIGTSLSIQ QQLFVLLRRS LKRADGLKLK RLVASNRLAM AKFGLTHVQR PLLSFGPKAS MKLKTCPVNV CKELRLSSHL
301: ISEFSTESSI MITDGVFSTA WLKNLQKPMG SLVLSLENAS GANSNAFHFC AQPNSIPGSV LQLLGSSYLL RATAWEIYGS APLARINALV YATCFSNASS
401: SADVALAYTK LIQHLAVFKG HREAFAALKL VEEKFCSISK SRILLLKLQL LHERALHLGH LKLAQQVCDE LGVLASSVTG VDMELKTEAS LRHARTLLAA
501: NQFGQAAAVA HSLFCMCYKF NLQVENATVL LLLAEIHKNR FKGKYGDSAR LSLS
101: HFLRYLNNLY HNDYPASLEN LHCYFDYSAG AEGFDFVQPT SSASNSFGRY EIALLCLGMM HFHFGHPKQA LEVLTEAVRV SQQQSNDTCL AYTLAAICNL
201: LSAIGISSTT EILGSSYGPV TSIGTSLSIQ QQLFVLLRRS LKRADGLKLK RLVASNRLAM AKFGLTHVQR PLLSFGPKAS MKLKTCPVNV CKELRLSSHL
301: ISEFSTESSI MITDGVFSTA WLKNLQKPMG SLVLSLENAS GANSNAFHFC AQPNSIPGSV LQLLGSSYLL RATAWEIYGS APLARINALV YATCFSNASS
401: SADVALAYTK LIQHLAVFKG HREAFAALKL VEEKFCSISK SRILLLKLQL LHERALHLGH LKLAQQVCDE LGVLASSVTG VDMELKTEAS LRHARTLLAA
501: NQFGQAAAVA HSLFCMCYKF NLQVENATVL LLLAEIHKNR FKGKYGDSAR LSLS
001: MAGLTRTAGA FAVTPHKISV CILLQIYAPS AQMSLPFPFS SVAQHNRLGL YLLSLTKSCD DIFEPKLEKL INQLREVGEE MDAWLTDHLT NRFSSLASPD
101: DLLNFFNDMR GILGSLDSGV VQDDQIILDP NSNLGMFVRR CILAFNLLSF EGVCHLFSSI EDYCKEAHSS FAQFGAPNNN LESLIQYDQM DMENYAMDKP
201: TEEIEFQKTA SGIVPFHLHT PDSLMKATEG LLHNRKETSR TSKKDTEATP VARASTSTLE ESLVDESLFL RTNLQIQGFL MEQADAIEIH GSSSSFSSSS
301: IESFLDQLQK LAPELHRVHF LRYLNKLHSD DYFAALDNLL RYFDYSAGTE GFDLVPPSTG CSMYGRYEIG LLCLGMMHFR FGHPNLALEV LTEAVRVSQQ
401: LSNDTCLAYT LAAMSNLLSE MGIASTSGVL GSSYSPVTST ASSLSVQQRV YILLKESLRR ADSLKLRRLV ASNHLAMAKF ELMHVQRPLL SFGPKASMRH
501: KTCPVSVCKE IRLGAHLISD FSSESSTMTI DGSLSSAWLK DLQKPWGPPV ISPDSGSRKS STFFQLCDHL VSIPGSVSQL IGASYLLRAT SWELYGSAPM
601: ARMNTLVYAT LFGDSSSSSD AELAYLKLIQ HLALYKGYKD AFAALKVAEE KFLTVSKSKV LLLKLQLLHE RALHCGNLKL AQRICNELGG LASTAMGVDM
701: ELKVEASLRE ARTLLAAKQY SQAANVAHSL FCTCHKFNLQ IEKASVLLLL AEIHKKSGNA VLGLPYALAS ISFCQSFNLD LLKASATLTL AELWLGLGSN
801: HTKRALDLLH GAFPMILGHG GLELRARAYI FEANCYLSDP SSSVSTDSDT VLDSLRQASD ELQALEYHEL AAEASYLMAM VYDKLGRLDE REEAASLFKK
901: HIIALENPQD VEQNMA
101: DLLNFFNDMR GILGSLDSGV VQDDQIILDP NSNLGMFVRR CILAFNLLSF EGVCHLFSSI EDYCKEAHSS FAQFGAPNNN LESLIQYDQM DMENYAMDKP
201: TEEIEFQKTA SGIVPFHLHT PDSLMKATEG LLHNRKETSR TSKKDTEATP VARASTSTLE ESLVDESLFL RTNLQIQGFL MEQADAIEIH GSSSSFSSSS
301: IESFLDQLQK LAPELHRVHF LRYLNKLHSD DYFAALDNLL RYFDYSAGTE GFDLVPPSTG CSMYGRYEIG LLCLGMMHFR FGHPNLALEV LTEAVRVSQQ
401: LSNDTCLAYT LAAMSNLLSE MGIASTSGVL GSSYSPVTST ASSLSVQQRV YILLKESLRR ADSLKLRRLV ASNHLAMAKF ELMHVQRPLL SFGPKASMRH
501: KTCPVSVCKE IRLGAHLISD FSSESSTMTI DGSLSSAWLK DLQKPWGPPV ISPDSGSRKS STFFQLCDHL VSIPGSVSQL IGASYLLRAT SWELYGSAPM
601: ARMNTLVYAT LFGDSSSSSD AELAYLKLIQ HLALYKGYKD AFAALKVAEE KFLTVSKSKV LLLKLQLLHE RALHCGNLKL AQRICNELGG LASTAMGVDM
701: ELKVEASLRE ARTLLAAKQY SQAANVAHSL FCTCHKFNLQ IEKASVLLLL AEIHKKSGNA VLGLPYALAS ISFCQSFNLD LLKASATLTL AELWLGLGSN
801: HTKRALDLLH GAFPMILGHG GLELRARAYI FEANCYLSDP SSSVSTDSDT VLDSLRQASD ELQALEYHEL AAEASYLMAM VYDKLGRLDE REEAASLFKK
901: HIIALENPQD VEQNMA
Arabidopsis Description
APC5Anaphase-promoting complex subunit 5 [Source:UniProtKB/Swiss-Prot;Acc:Q8H1U4]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.