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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • cytosol 1
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH14509 Soybean extracellular, mitochondrion, plasma membrane, plastid 72.02 43.28
KRH73622 Soybean endoplasmic reticulum, extracellular, plasma membrane 25.27 41.67
Solyc08g067190.2.1 Tomato cytosol, plastid 70.22 40.23
AT1G06590.1 Thale cress mitochondrion 64.08 38.76
Bra015512.1-P Field mustard mitochondrion 63.36 38.4
CDY06653 Canola mitochondrion 63.36 38.4
CDY10211 Canola mitochondrion 63.54 38.26
CDY06219 Canola mitochondrion, plastid 61.73 37.87
Bra032414.1-P Field mustard mitochondrion, plastid 61.73 37.54
GSMUA_Achr9P29220_001 Banana nucleus 61.91 36.96
CDY09966 Canola mitochondrion, plastid 57.94 36.27
HORVU5Hr1G005770.3 Barley cytosol 56.5 36.1
Os12t0626300-01 Rice cytosol, extracellular, plasma membrane 57.58 34.83
TraesCS5D01G025900.1 Wheat cytosol, nucleus, peroxisome 57.4 34.57
TraesCS5A01G020800.1 Wheat cytosol 57.04 34.27
TraesCS5B01G017800.1 Wheat cytosol 56.86 34.16
EES02737 Sorghum cytosol, nucleus, plasma membrane 55.05 33.48
VIT_02s0012g02000.t01 Wine grape cytosol 14.08 30.95
Zm00001d021235_P001 Maize plastid 2.71 17.65
VIT_12s0028g00810.t01 Wine grape plastid 4.15 8.52
VIT_12s0028g00720.t01 Wine grape extracellular 0.54 1.74
Protein Annotations
ArrayExpress:VIT_12s0028g00740EMBL:FN595235EnsemblPlants:VIT_12s0028g00740.t01EnsemblPlantsGene:VIT_12s0028g00740GO:GO:0003674GO:GO:0003676
GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0005680
InterPro:Apc5InterPro:Apc5_domPANTHER:PTHR12830PANTHER:PTHR12830:SF9PFAM:PF12862ProteinID:CCB47452
ProteinID:CCB47452.1SEG:segUniParc:UPI0002109D8EUniProt:F6H584MapMan:13.3.4.1.1.1.3:
Description
No Description!
Coordinates
chr12:-:1283670..1320715
Molecular Weight (calculated)
61128.0 Da
IEP (calculated)
8.940
GRAVY (calculated)
0.041
Length
554 amino acids
Sequence
(BLAST)
001: MKCGNFRQVL QSTDIEVSAE LKFKHREKTG EASSFAHHMK DTLRGIDPNG GIFLRTNWQI QGYLCEQADA IEKHSCSFPL NAFESILRQL QKLAPELHRV
101: HFLRYLNNLY HNDYPASLEN LHCYFDYSAG AEGFDFVQPT SSASNSFGRY EIALLCLGMM HFHFGHPKQA LEVLTEAVRV SQQQSNDTCL AYTLAAICNL
201: LSAIGISSTT EILGSSYGPV TSIGTSLSIQ QQLFVLLRRS LKRADGLKLK RLVASNRLAM AKFGLTHVQR PLLSFGPKAS MKLKTCPVNV CKELRLSSHL
301: ISEFSTESSI MITDGVFSTA WLKNLQKPMG SLVLSLENAS GANSNAFHFC AQPNSIPGSV LQLLGSSYLL RATAWEIYGS APLARINALV YATCFSNASS
401: SADVALAYTK LIQHLAVFKG HREAFAALKL VEEKFCSISK SRILLLKLQL LHERALHLGH LKLAQQVCDE LGVLASSVTG VDMELKTEAS LRHARTLLAA
501: NQFGQAAAVA HSLFCMCYKF NLQVENATVL LLLAEIHKNR FKGKYGDSAR LSLS
Best Arabidopsis Sequence Match ( AT1G06590.1 )
(BLAST)
001: MAGLTRTAGA FAVTPHKISV CILLQIYAPS AQMSLPFPFS SVAQHNRLGL YLLSLTKSCD DIFEPKLEKL INQLREVGEE MDAWLTDHLT NRFSSLASPD
101: DLLNFFNDMR GILGSLDSGV VQDDQIILDP NSNLGMFVRR CILAFNLLSF EGVCHLFSSI EDYCKEAHSS FAQFGAPNNN LESLIQYDQM DMENYAMDKP
201: TEEIEFQKTA SGIVPFHLHT PDSLMKATEG LLHNRKETSR TSKKDTEATP VARASTSTLE ESLVDESLFL RTNLQIQGFL MEQADAIEIH GSSSSFSSSS
301: IESFLDQLQK LAPELHRVHF LRYLNKLHSD DYFAALDNLL RYFDYSAGTE GFDLVPPSTG CSMYGRYEIG LLCLGMMHFR FGHPNLALEV LTEAVRVSQQ
401: LSNDTCLAYT LAAMSNLLSE MGIASTSGVL GSSYSPVTST ASSLSVQQRV YILLKESLRR ADSLKLRRLV ASNHLAMAKF ELMHVQRPLL SFGPKASMRH
501: KTCPVSVCKE IRLGAHLISD FSSESSTMTI DGSLSSAWLK DLQKPWGPPV ISPDSGSRKS STFFQLCDHL VSIPGSVSQL IGASYLLRAT SWELYGSAPM
601: ARMNTLVYAT LFGDSSSSSD AELAYLKLIQ HLALYKGYKD AFAALKVAEE KFLTVSKSKV LLLKLQLLHE RALHCGNLKL AQRICNELGG LASTAMGVDM
701: ELKVEASLRE ARTLLAAKQY SQAANVAHSL FCTCHKFNLQ IEKASVLLLL AEIHKKSGNA VLGLPYALAS ISFCQSFNLD LLKASATLTL AELWLGLGSN
801: HTKRALDLLH GAFPMILGHG GLELRARAYI FEANCYLSDP SSSVSTDSDT VLDSLRQASD ELQALEYHEL AAEASYLMAM VYDKLGRLDE REEAASLFKK
901: HIIALENPQD VEQNMA
Arabidopsis Description
APC5Anaphase-promoting complex subunit 5 [Source:UniProtKB/Swiss-Prot;Acc:Q8H1U4]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.