Subcellular Localization
min:
: max
Winner_takes_all: extracellular, plasma membrane, endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 5
- golgi 4
- plasma membrane 5
- endoplasmic reticulum 5
- vacuole 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_02s0012g02000.t01 | Wine grape | cytosol | 57.74 | 76.98 |
| VIT_12s0028g00720.t01 | Wine grape | extracellular | 37.8 | 73.84 |
| KRH14509 | Soybean | extracellular, mitochondrion, plasma membrane, plastid | 94.94 | 34.6 |
| Bra015512.1-P | Field mustard | mitochondrion | 73.51 | 27.02 |
| CDY10211 | Canola | mitochondrion | 73.81 | 26.96 |
| CDY06653 | Canola | mitochondrion | 72.92 | 26.81 |
| CDY06219 | Canola | mitochondrion, plastid | 71.13 | 26.47 |
| Bra032414.1-P | Field mustard | mitochondrion, plastid | 71.43 | 26.34 |
| CDY09966 | Canola | mitochondrion, plastid | 69.35 | 26.33 |
| AT1G06590.1 | Thale cress | mitochondrion | 71.43 | 26.2 |
| VIT_12s0028g00740.t01 | Wine grape | nucleus | 41.67 | 25.27 |
| GSMUA_Achr9P29220_001 | Banana | nucleus | 69.64 | 25.22 |
| HORVU5Hr1G005770.3 | Barley | cytosol | 64.88 | 25.14 |
| Solyc08g067190.2.1 | Tomato | cytosol, plastid | 71.13 | 24.72 |
| EES02737 | Sorghum | cytosol, nucleus, plasma membrane | 66.37 | 24.48 |
| Os12t0626300-01 | Rice | cytosol, extracellular, plasma membrane | 66.67 | 24.45 |
| TraesCS5D01G025900.1 | Wheat | cytosol, nucleus, peroxisome | 66.67 | 24.35 |
| TraesCS5B01G017800.1 | Wheat | cytosol | 66.37 | 24.19 |
| TraesCS5A01G020800.1 | Wheat | cytosol | 66.07 | 24.08 |
| Zm00001d021235_P001 | Maize | plastid | 4.76 | 18.82 |
Protein Annotations
| MapMan:13.3.4.1.1.1.3 | UniProt:A0A0R0L2U1 | EMBL:ACUP02001285 | InterPro:Apc5 | EnsemblPlantsGene:GLYMA_02G284500 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0005680 | EnsemblPlants:KRH73622 | ProteinID:KRH73622 | ProteinID:KRH73622.1 | PANTHER:PTHR12830 | PANTHER:PTHR12830:SF9 |
| SignalP:SignalP-noTM | UniParc:UPI0006EDF141 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr2:+:46598685..46601831
Molecular Weight (calculated)
37425.6 Da
IEP (calculated)
6.506
GRAVY (calculated)
0.314
Length
336 amino acids
Sequence
(BLAST)
(BLAST)
001: MYFTILIFFP IVISSPLSRI NALVHATCFA DASSSSDAAL AYVKLIQHLA VFKGYKEAFF ALKIAEEKFL SVSKSQILLL KLLLLHEHAL HRGQLKLAQK
101: LCDELGVLAS RVTRVDMELK TEASLRHART LLAANQFREA AAVAHSLFCM CYKYNLQVEN ASVLLLLAEI HKKSGNAHLG LPYALASLSF CLSFNLDLLK
201: ASATLTLAEL WLSLGSSHAT RALNLIHGVF PMILGHGGLE LRSRAYIVEA KCYLCDSNFN VFENYEIVVD SLSQASEELQ LLEFHELASE AFYLMAMVYD
301: KLGQLEEREE AAASFQKHIL ALRNPQDEDD PLVSVF
101: LCDELGVLAS RVTRVDMELK TEASLRHART LLAANQFREA AAVAHSLFCM CYKYNLQVEN ASVLLLLAEI HKKSGNAHLG LPYALASLSF CLSFNLDLLK
201: ASATLTLAEL WLSLGSSHAT RALNLIHGVF PMILGHGGLE LRSRAYIVEA KCYLCDSNFN VFENYEIVVD SLSQASEELQ LLEFHELASE AFYLMAMVYD
301: KLGQLEEREE AAASFQKHIL ALRNPQDEDD PLVSVF
001: MAGLTRTAGA FAVTPHKISV CILLQIYAPS AQMSLPFPFS SVAQHNRLGL YLLSLTKSCD DIFEPKLEKL INQLREVGEE MDAWLTDHLT NRFSSLASPD
101: DLLNFFNDMR GILGSLDSGV VQDDQIILDP NSNLGMFVRR CILAFNLLSF EGVCHLFSSI EDYCKEAHSS FAQFGAPNNN LESLIQYDQM DMENYAMDKP
201: TEEIEFQKTA SGIVPFHLHT PDSLMKATEG LLHNRKETSR TSKKDTEATP VARASTSTLE ESLVDESLFL RTNLQIQGFL MEQADAIEIH GSSSSFSSSS
301: IESFLDQLQK LAPELHRVHF LRYLNKLHSD DYFAALDNLL RYFDYSAGTE GFDLVPPSTG CSMYGRYEIG LLCLGMMHFR FGHPNLALEV LTEAVRVSQQ
401: LSNDTCLAYT LAAMSNLLSE MGIASTSGVL GSSYSPVTST ASSLSVQQRV YILLKESLRR ADSLKLRRLV ASNHLAMAKF ELMHVQRPLL SFGPKASMRH
501: KTCPVSVCKE IRLGAHLISD FSSESSTMTI DGSLSSAWLK DLQKPWGPPV ISPDSGSRKS STFFQLCDHL VSIPGSVSQL IGASYLLRAT SWELYGSAPM
601: ARMNTLVYAT LFGDSSSSSD AELAYLKLIQ HLALYKGYKD AFAALKVAEE KFLTVSKSKV LLLKLQLLHE RALHCGNLKL AQRICNELGG LASTAMGVDM
701: ELKVEASLRE ARTLLAAKQY SQAANVAHSL FCTCHKFNLQ IEKASVLLLL AEIHKKSGNA VLGLPYALAS ISFCQSFNLD LLKASATLTL AELWLGLGSN
801: HTKRALDLLH GAFPMILGHG GLELRARAYI FEANCYLSDP SSSVSTDSDT VLDSLRQASD ELQALEYHEL AAEASYLMAM VYDKLGRLDE REEAASLFKK
901: HIIALENPQD VEQNMA
101: DLLNFFNDMR GILGSLDSGV VQDDQIILDP NSNLGMFVRR CILAFNLLSF EGVCHLFSSI EDYCKEAHSS FAQFGAPNNN LESLIQYDQM DMENYAMDKP
201: TEEIEFQKTA SGIVPFHLHT PDSLMKATEG LLHNRKETSR TSKKDTEATP VARASTSTLE ESLVDESLFL RTNLQIQGFL MEQADAIEIH GSSSSFSSSS
301: IESFLDQLQK LAPELHRVHF LRYLNKLHSD DYFAALDNLL RYFDYSAGTE GFDLVPPSTG CSMYGRYEIG LLCLGMMHFR FGHPNLALEV LTEAVRVSQQ
401: LSNDTCLAYT LAAMSNLLSE MGIASTSGVL GSSYSPVTST ASSLSVQQRV YILLKESLRR ADSLKLRRLV ASNHLAMAKF ELMHVQRPLL SFGPKASMRH
501: KTCPVSVCKE IRLGAHLISD FSSESSTMTI DGSLSSAWLK DLQKPWGPPV ISPDSGSRKS STFFQLCDHL VSIPGSVSQL IGASYLLRAT SWELYGSAPM
601: ARMNTLVYAT LFGDSSSSSD AELAYLKLIQ HLALYKGYKD AFAALKVAEE KFLTVSKSKV LLLKLQLLHE RALHCGNLKL AQRICNELGG LASTAMGVDM
701: ELKVEASLRE ARTLLAAKQY SQAANVAHSL FCTCHKFNLQ IEKASVLLLL AEIHKKSGNA VLGLPYALAS ISFCQSFNLD LLKASATLTL AELWLGLGSN
801: HTKRALDLLH GAFPMILGHG GLELRARAYI FEANCYLSDP SSSVSTDSDT VLDSLRQASD ELQALEYHEL AAEASYLMAM VYDKLGRLDE REEAASLFKK
901: HIIALENPQD VEQNMA
Arabidopsis Description
APC5Anaphase-promoting complex subunit 5 [Source:UniProtKB/Swiss-Prot;Acc:Q8H1U4]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.