Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 1
- extracellular 5
- nucleus 1
- endoplasmic reticulum 3
- vacuole 4
- plasma membrane 3
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_02s0012g02000.t01 | Wine grape | cytosol | 92.44 | 63.1 |
| KRH73622 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 73.84 | 37.8 |
| KRH14509 | Soybean | extracellular, mitochondrion, plasma membrane, plastid | 76.16 | 14.21 |
| Bra015512.1-P | Field mustard | mitochondrion | 73.84 | 13.89 |
| CDY10211 | Canola | mitochondrion | 73.84 | 13.8 |
| CDY06653 | Canola | mitochondrion | 72.67 | 13.68 |
| Bra032414.1-P | Field mustard | mitochondrion, plastid | 71.51 | 13.5 |
| CDY06219 | Canola | mitochondrion, plastid | 70.35 | 13.4 |
| AT1G06590.1 | Thale cress | mitochondrion | 70.93 | 13.32 |
| CDY09966 | Canola | mitochondrion, plastid | 68.02 | 13.22 |
| Os12t0626300-01 | Rice | cytosol, extracellular, plasma membrane | 68.02 | 12.77 |
| EES02737 | Sorghum | cytosol, nucleus, plasma membrane | 67.44 | 12.73 |
| HORVU5Hr1G005770.3 | Barley | cytosol | 63.37 | 12.57 |
| GSMUA_Achr9P29220_001 | Banana | nucleus | 66.86 | 12.39 |
| TraesCS5D01G025900.1 | Wheat | cytosol, nucleus, peroxisome | 65.12 | 12.17 |
| TraesCS5B01G017800.1 | Wheat | cytosol | 65.12 | 12.15 |
| TraesCS5A01G020800.1 | Wheat | cytosol | 64.53 | 12.04 |
| Solyc08g067190.2.1 | Tomato | cytosol, plastid | 65.12 | 11.58 |
| Zm00001d021235_P001 | Maize | plastid | 1.74 | 3.53 |
| VIT_12s0028g00810.t01 | Wine grape | plastid | 1.74 | 1.11 |
| VIT_12s0028g00740.t01 | Wine grape | nucleus | 1.74 | 0.54 |
Protein Annotations
| ArrayExpress:VIT_12s0028g00720 | EMBL:FN595235 | EnsemblPlants:VIT_12s0028g00720.t01 | EnsemblPlantsGene:VIT_12s0028g00720 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005680 | InterPro:Apc5 | PANTHER:PTHR12830 | PANTHER:PTHR12830:SF9 |
| ProteinID:CCB47453 | ProteinID:CCB47453.1 | UniParc:UPI0002109D8F | UniProt:F6H585 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr12:-:1273034..1279236
Molecular Weight (calculated)
18924.7 Da
IEP (calculated)
4.499
GRAVY (calculated)
0.113
Length
172 amino acids
Sequence
(BLAST)
(BLAST)
001: MPLSCLSPKS GNAVLGLPYA LASLSFCQSF NLDLLKASAT LTLAELWLSL GSNHAERASI LVQGALPMIL GHGGLELRSR AYIAEAKCYL SNPSFSVFEN
101: SEVVLDPLRQ ATEELEILEY HELAAEAFYL IAMVFDKLGQ LEEREEAAAS FMKHVKALEN PQNEQDPLFN IH
101: SEVVLDPLRQ ATEELEILEY HELAAEAFYL IAMVFDKLGQ LEEREEAAAS FMKHVKALEN PQNEQDPLFN IH
001: MAGLTRTAGA FAVTPHKISV CILLQIYAPS AQMSLPFPFS SVAQHNRLGL YLLSLTKSCD DIFEPKLEKL INQLREVGEE MDAWLTDHLT NRFSSLASPD
101: DLLNFFNDMR GILGSLDSGV VQDDQIILDP NSNLGMFVRR CILAFNLLSF EGVCHLFSSI EDYCKEAHSS FAQFGAPNNN LESLIQYDQM DMENYAMDKP
201: TEEIEFQKTA SGIVPFHLHT PDSLMKATEG LLHNRKETSR TSKKDTEATP VARASTSTLE ESLVDESLFL RTNLQIQGFL MEQADAIEIH GSSSSFSSSS
301: IESFLDQLQK LAPELHRVHF LRYLNKLHSD DYFAALDNLL RYFDYSAGTE GFDLVPPSTG CSMYGRYEIG LLCLGMMHFR FGHPNLALEV LTEAVRVSQQ
401: LSNDTCLAYT LAAMSNLLSE MGIASTSGVL GSSYSPVTST ASSLSVQQRV YILLKESLRR ADSLKLRRLV ASNHLAMAKF ELMHVQRPLL SFGPKASMRH
501: KTCPVSVCKE IRLGAHLISD FSSESSTMTI DGSLSSAWLK DLQKPWGPPV ISPDSGSRKS STFFQLCDHL VSIPGSVSQL IGASYLLRAT SWELYGSAPM
601: ARMNTLVYAT LFGDSSSSSD AELAYLKLIQ HLALYKGYKD AFAALKVAEE KFLTVSKSKV LLLKLQLLHE RALHCGNLKL AQRICNELGG LASTAMGVDM
701: ELKVEASLRE ARTLLAAKQY SQAANVAHSL FCTCHKFNLQ IEKASVLLLL AEIHKKSGNA VLGLPYALAS ISFCQSFNLD LLKASATLTL AELWLGLGSN
801: HTKRALDLLH GAFPMILGHG GLELRARAYI FEANCYLSDP SSSVSTDSDT VLDSLRQASD ELQALEYHEL AAEASYLMAM VYDKLGRLDE REEAASLFKK
901: HIIALENPQD VEQNMA
101: DLLNFFNDMR GILGSLDSGV VQDDQIILDP NSNLGMFVRR CILAFNLLSF EGVCHLFSSI EDYCKEAHSS FAQFGAPNNN LESLIQYDQM DMENYAMDKP
201: TEEIEFQKTA SGIVPFHLHT PDSLMKATEG LLHNRKETSR TSKKDTEATP VARASTSTLE ESLVDESLFL RTNLQIQGFL MEQADAIEIH GSSSSFSSSS
301: IESFLDQLQK LAPELHRVHF LRYLNKLHSD DYFAALDNLL RYFDYSAGTE GFDLVPPSTG CSMYGRYEIG LLCLGMMHFR FGHPNLALEV LTEAVRVSQQ
401: LSNDTCLAYT LAAMSNLLSE MGIASTSGVL GSSYSPVTST ASSLSVQQRV YILLKESLRR ADSLKLRRLV ASNHLAMAKF ELMHVQRPLL SFGPKASMRH
501: KTCPVSVCKE IRLGAHLISD FSSESSTMTI DGSLSSAWLK DLQKPWGPPV ISPDSGSRKS STFFQLCDHL VSIPGSVSQL IGASYLLRAT SWELYGSAPM
601: ARMNTLVYAT LFGDSSSSSD AELAYLKLIQ HLALYKGYKD AFAALKVAEE KFLTVSKSKV LLLKLQLLHE RALHCGNLKL AQRICNELGG LASTAMGVDM
701: ELKVEASLRE ARTLLAAKQY SQAANVAHSL FCTCHKFNLQ IEKASVLLLL AEIHKKSGNA VLGLPYALAS ISFCQSFNLD LLKASATLTL AELWLGLGSN
801: HTKRALDLLH GAFPMILGHG GLELRARAYI FEANCYLSDP SSSVSTDSDT VLDSLRQASD ELQALEYHEL AAEASYLMAM VYDKLGRLDE REEAASLFKK
901: HIIALENPQD VEQNMA
Arabidopsis Description
APC5Anaphase-promoting complex subunit 5 [Source:UniProtKB/Swiss-Prot;Acc:Q8H1U4]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.