Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 3
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY06653 | Canola | mitochondrion | 99.45 | 99.45 |
| AT1G06590.1 | Thale cress | mitochondrion | 90.59 | 90.39 |
| Bra032414.1-P | Field mustard | mitochondrion, plastid | 88.62 | 88.91 |
| VIT_02s0012g02000.t01 | Wine grape | cytosol | 20.68 | 75.0 |
| VIT_12s0028g00720.t01 | Wine grape | extracellular | 13.89 | 73.84 |
| KRH73622 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 27.02 | 73.51 |
| KRH14509 | Soybean | extracellular, mitochondrion, plasma membrane, plastid | 66.63 | 66.05 |
| VIT_12s0028g00740.t01 | Wine grape | nucleus | 38.4 | 63.36 |
| Solyc08g067190.2.1 | Tomato | cytosol, plastid | 61.27 | 57.91 |
| HORVU5Hr1G005770.3 | Barley | cytosol | 49.45 | 52.13 |
| GSMUA_Achr9P29220_001 | Banana | nucleus | 52.19 | 51.4 |
| Os12t0626300-01 | Rice | cytosol, extracellular, plasma membrane | 51.09 | 50.98 |
| TraesCS5B01G017800.1 | Wheat | cytosol | 51.09 | 50.65 |
| TraesCS5D01G025900.1 | Wheat | cytosol, nucleus, peroxisome | 50.88 | 50.54 |
| TraesCS5A01G020800.1 | Wheat | cytosol | 50.98 | 50.54 |
| EES02737 | Sorghum | cytosol, nucleus, plasma membrane | 48.91 | 49.07 |
| Zm00001d021235_P001 | Maize | plastid | 1.75 | 18.82 |
Protein Annotations
| EnsemblPlants:Bra015512.1 | EnsemblPlants:Bra015512.1-P | EnsemblPlantsGene:Bra015512 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0005680 | InterPro:Apc5 | InterPro:Apc5_dom | PANTHER:PTHR12830 | PANTHER:PTHR12830:SF9 |
| PFAM:PF12862 | SEG:seg | UniParc:UPI000254512B | UniProt:M4DG89 | MapMan:13.3.4.1.1.1.3 | : |
Description
AT1G06590 (E=0.0) | unknown protein
Coordinates
chrA10:+:1312912..1319846
Molecular Weight (calculated)
101354.0 Da
IEP (calculated)
6.081
GRAVY (calculated)
-0.026
Length
914 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGLTRTAGA FAVTPHKISV CILLQLYAPS AQMSLPFPFS SISQHNRLGL YLLSLTKSCD DIFEPKLEDL INQLREVGED MDAWLTDHLT NRFSSLTSPD
101: DLLNFFNDMR GILGSLDSGA AQDDQIILDP NSNLGMFVRR CILAFNLLSF EGVCHLFTSI EVYCREAHSS SAQYDESNDN LESLIQHDQM DMEKYIMDKA
201: TEEIELQKNA SGRVPFHLHT PEALFKVTEG LLVTRKEKSR TNTKKAEATQ LACASSSTVD DTLVDESLFL RTNYQIQGFL MEQADAIETH GSSLSSSSIE
301: SFLQKLQNLA PELHRVHFLR YLNKLHSDDY FAALENLLRY FDYSAGTEGF DLVLPSTGCS MYGRYEIALL CLGMMHFRFG HPNLALEVLT EAVRVSQQHS
401: NDTCLAYTLA AMSNLLSEMG IASTTSVLGS SYSPVTSTAS LLSVQQRVYI LLKESLRRAD TLKLRRLVAS NHLAMAKFEL MHVQRPLLSF GPKASVRHKT
501: CPVSVCKEIR LGAHLLSDFS AESSTMTIDG SLSSVWLKDL QKPWGQPVFS QESGSRKSST FFQFCDHLVS IPGSVSQIIG ASYLLRATSW ELYGSAPMAR
601: MNTLVYAALF GDSSSSSDAE LAYLKLIQHL ALYKGYKDAF AALKIAEEKF LTVSKSKILL LKLQLLHEHA LHRGNLKLAQ RMCNELGGLA STTMGVDMEL
701: KVEASLREAR TLLAAKQYSQ AANVAHSLFC TCHKFNLQIE KASVLLLLAE IHKKSGNAVL GLPYALASIS FCQSFNLDLL KASATLTLAE LWLGLGSNHA
801: KRALDLLHGA FPMILGHGGL ELRARAYIFE ANCYLSDPSF SVSTDSDTVL DSLRQASEEL QALEYHELAA EAFYLMAMVY DKVGQLEERE EAATLFKMHI
901: TALENPQDEE PNMA
101: DLLNFFNDMR GILGSLDSGA AQDDQIILDP NSNLGMFVRR CILAFNLLSF EGVCHLFTSI EVYCREAHSS SAQYDESNDN LESLIQHDQM DMEKYIMDKA
201: TEEIELQKNA SGRVPFHLHT PEALFKVTEG LLVTRKEKSR TNTKKAEATQ LACASSSTVD DTLVDESLFL RTNYQIQGFL MEQADAIETH GSSLSSSSIE
301: SFLQKLQNLA PELHRVHFLR YLNKLHSDDY FAALENLLRY FDYSAGTEGF DLVLPSTGCS MYGRYEIALL CLGMMHFRFG HPNLALEVLT EAVRVSQQHS
401: NDTCLAYTLA AMSNLLSEMG IASTTSVLGS SYSPVTSTAS LLSVQQRVYI LLKESLRRAD TLKLRRLVAS NHLAMAKFEL MHVQRPLLSF GPKASVRHKT
501: CPVSVCKEIR LGAHLLSDFS AESSTMTIDG SLSSVWLKDL QKPWGQPVFS QESGSRKSST FFQFCDHLVS IPGSVSQIIG ASYLLRATSW ELYGSAPMAR
601: MNTLVYAALF GDSSSSSDAE LAYLKLIQHL ALYKGYKDAF AALKIAEEKF LTVSKSKILL LKLQLLHEHA LHRGNLKLAQ RMCNELGGLA STTMGVDMEL
701: KVEASLREAR TLLAAKQYSQ AANVAHSLFC TCHKFNLQIE KASVLLLLAE IHKKSGNAVL GLPYALASIS FCQSFNLDLL KASATLTLAE LWLGLGSNHA
801: KRALDLLHGA FPMILGHGGL ELRARAYIFE ANCYLSDPSF SVSTDSDTVL DSLRQASEEL QALEYHELAA EAFYLMAMVY DKVGQLEERE EAATLFKMHI
901: TALENPQDEE PNMA
001: MAGLTRTAGA FAVTPHKISV CILLQIYAPS AQMSLPFPFS SVAQHNRLGL YLLSLTKSCD DIFEPKLEKL INQLREVGEE MDAWLTDHLT NRFSSLASPD
101: DLLNFFNDMR GILGSLDSGV VQDDQIILDP NSNLGMFVRR CILAFNLLSF EGVCHLFSSI EDYCKEAHSS FAQFGAPNNN LESLIQYDQM DMENYAMDKP
201: TEEIEFQKTA SGIVPFHLHT PDSLMKATEG LLHNRKETSR TSKKDTEATP VARASTSTLE ESLVDESLFL RTNLQIQGFL MEQADAIEIH GSSSSFSSSS
301: IESFLDQLQK LAPELHRVHF LRYLNKLHSD DYFAALDNLL RYFDYSAGTE GFDLVPPSTG CSMYGRYEIG LLCLGMMHFR FGHPNLALEV LTEAVRVSQQ
401: LSNDTCLAYT LAAMSNLLSE MGIASTSGVL GSSYSPVTST ASSLSVQQRV YILLKESLRR ADSLKLRRLV ASNHLAMAKF ELMHVQRPLL SFGPKASMRH
501: KTCPVSVCKE IRLGAHLISD FSSESSTMTI DGSLSSAWLK DLQKPWGPPV ISPDSGSRKS STFFQLCDHL VSIPGSVSQL IGASYLLRAT SWELYGSAPM
601: ARMNTLVYAT LFGDSSSSSD AELAYLKLIQ HLALYKGYKD AFAALKVAEE KFLTVSKSKV LLLKLQLLHE RALHCGNLKL AQRICNELGG LASTAMGVDM
701: ELKVEASLRE ARTLLAAKQY SQAANVAHSL FCTCHKFNLQ IEKASVLLLL AEIHKKSGNA VLGLPYALAS ISFCQSFNLD LLKASATLTL AELWLGLGSN
801: HTKRALDLLH GAFPMILGHG GLELRARAYI FEANCYLSDP SSSVSTDSDT VLDSLRQASD ELQALEYHEL AAEASYLMAM VYDKLGRLDE REEAASLFKK
901: HIIALENPQD VEQNMA
101: DLLNFFNDMR GILGSLDSGV VQDDQIILDP NSNLGMFVRR CILAFNLLSF EGVCHLFSSI EDYCKEAHSS FAQFGAPNNN LESLIQYDQM DMENYAMDKP
201: TEEIEFQKTA SGIVPFHLHT PDSLMKATEG LLHNRKETSR TSKKDTEATP VARASTSTLE ESLVDESLFL RTNLQIQGFL MEQADAIEIH GSSSSFSSSS
301: IESFLDQLQK LAPELHRVHF LRYLNKLHSD DYFAALDNLL RYFDYSAGTE GFDLVPPSTG CSMYGRYEIG LLCLGMMHFR FGHPNLALEV LTEAVRVSQQ
401: LSNDTCLAYT LAAMSNLLSE MGIASTSGVL GSSYSPVTST ASSLSVQQRV YILLKESLRR ADSLKLRRLV ASNHLAMAKF ELMHVQRPLL SFGPKASMRH
501: KTCPVSVCKE IRLGAHLISD FSSESSTMTI DGSLSSAWLK DLQKPWGPPV ISPDSGSRKS STFFQLCDHL VSIPGSVSQL IGASYLLRAT SWELYGSAPM
601: ARMNTLVYAT LFGDSSSSSD AELAYLKLIQ HLALYKGYKD AFAALKVAEE KFLTVSKSKV LLLKLQLLHE RALHCGNLKL AQRICNELGG LASTAMGVDM
701: ELKVEASLRE ARTLLAAKQY SQAANVAHSL FCTCHKFNLQ IEKASVLLLL AEIHKKSGNA VLGLPYALAS ISFCQSFNLD LLKASATLTL AELWLGLGSN
801: HTKRALDLLH GAFPMILGHG GLELRARAYI FEANCYLSDP SSSVSTDSDT VLDSLRQASD ELQALEYHEL AAEASYLMAM VYDKLGRLDE REEAASLFKK
901: HIIALENPQD VEQNMA
Arabidopsis Description
APC5Anaphase-promoting complex subunit 5 [Source:UniProtKB/Swiss-Prot;Acc:Q8H1U4]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.