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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • nucleus 1
  • mitochondrion 3
  • cytosol 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
  • golgi 1
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra015512.1-P Field mustard mitochondrion 99.45 99.45
CDY10211 Canola mitochondrion 98.47 97.83
AT1G06590.1 Thale cress mitochondrion 90.37 90.17
CDY06219 Canola mitochondrion, plastid 88.4 89.48
CDY09966 Canola mitochondrion, plastid 85.01 87.8
VIT_02s0012g02000.t01 Wine grape cytosol 20.46 74.21
KRH73622 Soybean endoplasmic reticulum, extracellular, plasma membrane 26.81 72.92
VIT_12s0028g00720.t01 Wine grape extracellular 13.68 72.67
KRH14509 Soybean extracellular, mitochondrion, plasma membrane, plastid 66.3 65.73
VIT_12s0028g00740.t01 Wine grape nucleus 38.4 63.36
Solyc08g067190.2.1 Tomato cytosol, plastid 60.72 57.39
HORVU5Hr1G005770.3 Barley cytosol 49.23 51.9
GSMUA_Achr9P29220_001 Banana nucleus 52.08 51.29
Os12t0626300-01 Rice cytosol, extracellular, plasma membrane 50.77 50.66
TraesCS5B01G017800.1 Wheat cytosol 50.88 50.43
TraesCS5D01G025900.1 Wheat cytosol, nucleus, peroxisome 50.66 50.33
TraesCS5A01G020800.1 Wheat cytosol 50.77 50.33
EES02737 Sorghum cytosol, nucleus, plasma membrane 48.8 48.96
Zm00001d021235_P001 Maize plastid 1.75 18.82
Protein Annotations
EnsemblPlants:CDY06653EnsemblPlantsGene:GSBRNA2T00122816001GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634
GO:GO:0005680InterPro:Apc5InterPro:Apc5_domPANTHER:PTHR12830PANTHER:PTHR12830:SF9PFAM:PF12862
ProteinID:CDY06653ProteinID:CDY06653.1SEG:segUniParc:UPI0004EEA452UniPathway:UPA00143MapMan:13.3.4.1.1.1.3
Description
BnaA10g04320D
Coordinates
chrLK031972:-:58808..66000
Molecular Weight (calculated)
101218.0 Da
IEP (calculated)
6.249
GRAVY (calculated)
-0.025
Length
914 amino acids
Sequence
(BLAST)
001: MAGLTRTAGA FAVTPHKISV CILLQLYAPS AQMSLPFPFS SISQHNRLGL YLLSLTKSCD DIFEPKLEDL INQLREVGED MDAWLTDHLT NRFSSLTSPD
101: DLLNFFNDMR GILGSLDSGA AQDDQIILDP NSNLGMFVRR CILAFNLLSF EGVCHLFTSI EVYCREAHSS SAQYDESNDN LESLIQHDQM DMEKYIMDKA
201: TEEVELQKNA SGRVPFHLHT PEALFKVTKG LLVTRKEKSR TNTKKAEATQ LACASSSTVG DTLVDESLFL RTNYQIQGFL MEQADAIETH GSSLSSSSIE
301: SFLQKLQNLA PELHRVHFLR YLNKLHSDDY FAALENLLRY FDYSAGTEGF DLVLPSTGCS MYGRYEIALL CLGMMHFRFG HPNLALEVLT EAVRVSQQHS
401: NDTCLAYTLA AMSNLLSEMG IASTTSVLGS SYSPVTSTAS LLSVQQRVYI LLKESLRRAD TLKLRRLVAS NHLAMAKFEL MHVQRPLLSF GPKASVRHKT
501: CPVSVCKEIR LGAHLLSDFS AESSTMTIDG SLSSVWLKDL QKPWGQPVFS QESGSRKSST FFQFCDHLVS IPGSVSQIIG ASYLLRATSW ELYGSAPMAR
601: MNTLVYAALF GDSSSSSDAE LAYLKLIQHL ALYKGYKDAF AALKIAEEKF LTVSKSKILL LKLQLLHEHA LHRGNLKLAQ RMCNELGGLA STTMGVDMEL
701: KVEASLREAR TLLAAKQYSQ AANVAHSLFC TCHKFNLQIE KASVLLLLAE IHKKSGNAVL GLPYALASIS FCQSFNLDLL KASATLTLAE LWLGLGSNHA
801: KRALDLLHGA FPMILGHGGL ELRARAYIFE ANCNLSDPSF SVSTDSDTVL DSLRQASDEL QALEYHELAA EAFYLMAMVY DKVGQLEERE EAATLFKMHI
901: TALENPQDEE PNMA
Best Arabidopsis Sequence Match ( AT1G06590.1 )
(BLAST)
001: MAGLTRTAGA FAVTPHKISV CILLQIYAPS AQMSLPFPFS SVAQHNRLGL YLLSLTKSCD DIFEPKLEKL INQLREVGEE MDAWLTDHLT NRFSSLASPD
101: DLLNFFNDMR GILGSLDSGV VQDDQIILDP NSNLGMFVRR CILAFNLLSF EGVCHLFSSI EDYCKEAHSS FAQFGAPNNN LESLIQYDQM DMENYAMDKP
201: TEEIEFQKTA SGIVPFHLHT PDSLMKATEG LLHNRKETSR TSKKDTEATP VARASTSTLE ESLVDESLFL RTNLQIQGFL MEQADAIEIH GSSSSFSSSS
301: IESFLDQLQK LAPELHRVHF LRYLNKLHSD DYFAALDNLL RYFDYSAGTE GFDLVPPSTG CSMYGRYEIG LLCLGMMHFR FGHPNLALEV LTEAVRVSQQ
401: LSNDTCLAYT LAAMSNLLSE MGIASTSGVL GSSYSPVTST ASSLSVQQRV YILLKESLRR ADSLKLRRLV ASNHLAMAKF ELMHVQRPLL SFGPKASMRH
501: KTCPVSVCKE IRLGAHLISD FSSESSTMTI DGSLSSAWLK DLQKPWGPPV ISPDSGSRKS STFFQLCDHL VSIPGSVSQL IGASYLLRAT SWELYGSAPM
601: ARMNTLVYAT LFGDSSSSSD AELAYLKLIQ HLALYKGYKD AFAALKVAEE KFLTVSKSKV LLLKLQLLHE RALHCGNLKL AQRICNELGG LASTAMGVDM
701: ELKVEASLRE ARTLLAAKQY SQAANVAHSL FCTCHKFNLQ IEKASVLLLL AEIHKKSGNA VLGLPYALAS ISFCQSFNLD LLKASATLTL AELWLGLGSN
801: HTKRALDLLH GAFPMILGHG GLELRARAYI FEANCYLSDP SSSVSTDSDT VLDSLRQASD ELQALEYHEL AAEASYLMAM VYDKLGRLDE REEAASLFKK
901: HIIALENPQD VEQNMA
Arabidopsis Description
APC5Anaphase-promoting complex subunit 5 [Source:UniProtKB/Swiss-Prot;Acc:Q8H1U4]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.