Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400083452 | Potato | cytosol | 16.32 | 55.86 |
| TraesCS7B01G299300.1 | Wheat | cytosol, mitochondrion | 88.68 | 46.68 |
| HORVU7Hr1G093620.9 | Barley | cytosol | 88.68 | 44.75 |
| Zm00001d042523_P001 | Maize | cytosol | 87.89 | 44.47 |
| TraesCS7D01G392900.2 | Wheat | cytosol | 88.68 | 44.46 |
| TraesCS7A01G398600.1 | Wheat | cytosol | 88.68 | 44.46 |
| KXG33895 | Sorghum | cytosol | 87.63 | 44.16 |
| Solyc03g061600.2.1 | Tomato | endoplasmic reticulum | 62.89 | 36.71 |
| GSMUA_Achr1P19740_001 | Banana | cytosol | 71.32 | 36.04 |
| VIT_11s0016g03260.t01 | Wine grape | cytosol | 65.79 | 32.85 |
| Bra039034.1-P | Field mustard | cytosol | 62.63 | 32.03 |
| CDY35917 | Canola | cytosol | 62.63 | 32.03 |
| CDY40468 | Canola | cytosol | 62.37 | 31.85 |
| PGSC0003DMT400006585 | Potato | cytosol | 63.68 | 31.59 |
| KRH01476 | Soybean | cytosol | 62.63 | 31.48 |
| AT2G20000.1 | Thale cress | cytosol | 61.58 | 31.45 |
| KRH18292 | Soybean | nucleus | 60.53 | 30.38 |
| KRG93804 | Soybean | cytosol | 60.53 | 30.38 |
| AT3G16320.1 | Thale cress | cytosol | 57.37 | 29.95 |
| CDX97740 | Canola | cytosol | 55.79 | 29.73 |
| CDY30158 | Canola | cytosol | 54.47 | 28.99 |
| Bra027173.1-P | Field mustard | cytosol | 55.53 | 26.88 |
| Os02t0656300-01 | Rice | cytosol | 21.58 | 13.74 |
| Os06t0679100-00 | Rice | plastid | 2.63 | 5.62 |
| Solyc03g061590.2.1 | Tomato | cytosol | 2.37 | 4.97 |
| CDY35918 | Canola | cytosol | 0.26 | 0.4 |
| KRH41728 | Soybean | extracellular, vacuole | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:13.3.4.1.1.2.1 | UniProt:A0A0N7KMF5 | ProteinID:BAS98673.1 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | InterPro:IPR011990 | InterPro:IPR013026 | InterPro:IPR019734 | EnsemblPlantsGene:Os06g0622500 | EnsemblPlants:Os06t0622500-00 |
| PFAM:PF00515 | PFAM:PF13181 | PFscan:PS50005 | PFscan:PS50293 | PANTHER:PTHR12558 | PANTHER:PTHR12558:SF13 |
| SMART:SM00028 | SUPFAM:SSF48452 | InterPro:TPR-contain_dom | InterPro:TPR-like_helical_dom_sf | InterPro:TPR_1 | InterPro:TPR_repeat |
| UniParc:UPI0003939F99 | SEG:seg | : | : | : | : |
Description
ANAPHASE PROMOTING COMPLEX 3Similar to predicted protein. (Os06t0622500-00)
Coordinates
chr6:-:25025002..25028105
Molecular Weight (calculated)
43689.4 Da
IEP (calculated)
5.016
GRAVY (calculated)
-0.257
Length
380 amino acids
Sequence
(BLAST)
(BLAST)
001: MWTDNVTSTS SSTSIVDGRY PEQEKSERVL SQDSKLAIGI RELMALLRTL GEGYRLSCLF KCQEALEVYR KLPEAQFNTG WVLCQVGKTY FELVNYLEAD
101: HFFELAHRLS PCTLEGMDIY STVLYHLNEE MRLSYLAQDL VSIDRLSPQA WCAVGNCFAL RKDHETALKN FQRAVQLDSR VAYAHTLCGH EYSALEDYEN
201: SIKLYRSALQ VDERHYNAWY GLGVVYLRQE KFEFAEHHFR RAFQINPCSS VLMCYLGMAL HALKRNEEAL EMMENAIFAD KKNPLPKYQK ALILLGLQKY
301: PDALDELERL KEIAPHESSM YALMGKIYKQ LNILDKAVFC FGIALDLKPP AADVAIIKSA MEKVHLPDEL MDDDDDDDEI
101: HFFELAHRLS PCTLEGMDIY STVLYHLNEE MRLSYLAQDL VSIDRLSPQA WCAVGNCFAL RKDHETALKN FQRAVQLDSR VAYAHTLCGH EYSALEDYEN
201: SIKLYRSALQ VDERHYNAWY GLGVVYLRQE KFEFAEHHFR RAFQINPCSS VLMCYLGMAL HALKRNEEAL EMMENAIFAD KKNPLPKYQK ALILLGLQKY
301: PDALDELERL KEIAPHESSM YALMGKIYKQ LNILDKAVFC FGIALDLKPP AADVAIIKSA MEKVHLPDEL MDDDDDDDEI
001: MEAMLVDCVN NSLRHFVYKN AIFMCERLCA EFPSEVNLQL LATSYLQNNQ AYSAYHLLKG TQMAQSRYLF ALSCFQMDLL NEAESALCPV NEPGAEIPNG
101: AAGHYLLGLI YKYTDRRKNA AQQFKQSLTI DPLLWAAYEE LCILGAAEEA TAVFGETAAL SIQKQYMQQL STSLGLNTYN EERNSTSTKN TSSEDYSPRQ
201: SKHTQSHGLK DISGNFHSHG VNGGVSNMSF YNTPSPVAAQ LSGIAPPPLF RNFQPAVANP NSLITDSSPK STVNSTLQAP RRKFVDEGKL RKISGRLFSD
301: SGPRRSSRLS ADSGANINSS VATVSGNVNN ASKYLGGSKL SSLALRSVTL RKGHSWANEN MDEGVRGEPF DDSRPNTAST TGSMASNDQE DETMSIGGIA
401: MSSQTITIGV SEILNLLRTL GEGCRLSYMY RCQEALDTYM KLPHKHYNTG WVLSQVGKAY FELIDYLEAE KAFRLARLAS PYCLEGMDIY STVLYHLKED
501: MKLSYLAQEL ISTDRLAPQS WCAMGNCYSL QKDHETALKN FLRAVQLNPR FAYAHTLCGH EYTTLEDFEN GMKSYQNALR VDTRHYNAWY GLGMIYLRQE
601: KLEFSEHHFR MAFLINPSSS VIMSYLGTSL HALKRSEEAL EIMEQAIVAD RKNPLPMYQK ANILVCLERL DEALEVLEEL KEYAPSESSV YALMGRIYKR
701: RNMHDKAMLH FGLALDMKPP ATDVAAIKAA MEKLHVPDEI DESP
101: AAGHYLLGLI YKYTDRRKNA AQQFKQSLTI DPLLWAAYEE LCILGAAEEA TAVFGETAAL SIQKQYMQQL STSLGLNTYN EERNSTSTKN TSSEDYSPRQ
201: SKHTQSHGLK DISGNFHSHG VNGGVSNMSF YNTPSPVAAQ LSGIAPPPLF RNFQPAVANP NSLITDSSPK STVNSTLQAP RRKFVDEGKL RKISGRLFSD
301: SGPRRSSRLS ADSGANINSS VATVSGNVNN ASKYLGGSKL SSLALRSVTL RKGHSWANEN MDEGVRGEPF DDSRPNTAST TGSMASNDQE DETMSIGGIA
401: MSSQTITIGV SEILNLLRTL GEGCRLSYMY RCQEALDTYM KLPHKHYNTG WVLSQVGKAY FELIDYLEAE KAFRLARLAS PYCLEGMDIY STVLYHLKED
501: MKLSYLAQEL ISTDRLAPQS WCAMGNCYSL QKDHETALKN FLRAVQLNPR FAYAHTLCGH EYTTLEDFEN GMKSYQNALR VDTRHYNAWY GLGMIYLRQE
601: KLEFSEHHFR MAFLINPSSS VIMSYLGTSL HALKRSEEAL EIMEQAIVAD RKNPLPMYQK ANILVCLERL DEALEVLEEL KEYAPSESSV YALMGRIYKR
701: RNMHDKAMLH FGLALDMKPP ATDVAAIKAA MEKLHVPDEI DESP
Arabidopsis Description
CDC27BCell division cycle protein 27 homolog B [Source:UniProtKB/Swiss-Prot;Acc:Q8LGU6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.