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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • plastid 2
  • cytosol 3
  • mitochondrion 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
iPSORT:plastid
MultiLoc:cytosol
Plant-mPloc:cytosol
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:cytosol
YLoc:plastid
PPI

Inferred distinct locusB in Crop

locusBlocations
Os01t0583100-01
Os01t0846300-01
Os03t0268600-01
Os05t0537400-00
Os05t0592800-02
Os06t0531000-00
Os06t0622500-00
Os09t0325700-01

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G38310.1 Os01t0583100-01 AT1G72770.1 19407142
AT2G38310.1 Os05t0537400-00 AT1G72770.1 19407142
AT2G38310.1 Os05t0592800-02 AT1G72770.1 19407142
AT2G38310.1 Os01t0583100-01 AT1G72770.1 19624469
AT2G38310.1 Os05t0537400-00 AT1G72770.1 19624469
AT2G38310.1 Os05t0592800-02 AT1G72770.1 19624469
AT2G38310.1 Os01t0846300-01 AT3G11410.1 19407142
AT2G38310.1 Os03t0268600-01 AT3G11410.1 19407142
AT2G38310.1 Os09t0325700-01 AT3G11410.1 19407142
AT2G38310.1 Os06t0531000-00 AT4G18340.1 19407142
AT2G38310.1 Os01t0846300-01 AT5G59220.1 19407142
AT2G38310.1 Os03t0268600-01 AT5G59220.1 19407142
AT2G38310.1 Os09t0325700-01 AT5G59220.1 19407142
AT2G40330.1 Os01t0583100-01 AT1G72770.1 19407142
AT2G40330.1 Os05t0537400-00 AT1G72770.1 19407142
AT2G40330.1 Os05t0592800-02 AT1G72770.1 19407142
AT2G40330.1 Os01t0583100-01 AT1G72770.1 19624469
AT2G40330.1 Os05t0537400-00 AT1G72770.1 19624469
AT2G40330.1 Os05t0592800-02 AT1G72770.1 19624469
AT2G40330.1 Os06t0622500-00 AT2G20000.1 17944809
AT5G05440.1 Os01t0583100-01 AT1G72770.1 19407142
AT5G05440.1 Os05t0537400-00 AT1G72770.1 19407142
AT5G05440.1 Os05t0592800-02 AT1G72770.1 19407142
AT5G05440.1 Os01t0583100-01 AT1G72770.1 19624469
AT5G05440.1 Os05t0537400-00 AT1G72770.1 19624469
AT5G05440.1 Os05t0592800-02 AT1G72770.1 19624469
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS4A01G114400.1 Wheat cytosol 70.74 90.5
Zm00001d028793_P001 Maize cytosol, mitochondrion, plastid 84.28 87.73
HORVU4Hr1G055220.1 Barley cytosol 85.59 87.5
TraesCS4D01G191200.1 Wheat cytosol 85.15 87.05
TraesCS4B01G189800.1 Wheat cytosol 85.15 87.05
Zm00001d047705_P001 Maize plastid 82.53 86.7
EER92405 Sorghum plastid 83.84 86.49
GSMUA_Achr9P04600_001 Banana cytosol 44.1 70.63
Os05t0473000-01 Rice cytosol 63.76 67.28
KRH00319 Soybean cytosol 51.53 66.67
GSMUA_AchrUn_... Banana plastid 45.85 66.46
GSMUA_Achr6P32790_001 Banana cytosol 61.14 66.35
GSMUA_Achr9P17980_001 Banana cytosol 42.79 65.77
KRH49452 Soybean plastid 50.66 65.17
Bra028758.1-P Field mustard cytosol 44.98 62.42
GSMUA_Achr8P21220_001 Banana cytosol 44.98 60.59
VIT_13s0067g01940.t01 Wine grape plastid 55.02 59.43
GSMUA_Achr10P... Banana cytosol, plastid 50.66 58.59
KRH76014 Soybean cytosol 54.59 57.87
CDY18391 Canola plastid 51.53 57.84
CDY54415 Canola cytosol 51.53 57.84
Bra017125.1-P Field mustard plastid 51.53 57.84
AT2G38310.1 Thale cress plastid 51.53 57.0
CDX91449 Canola plastid 51.53 57.0
CDY54453 Canola plastid 51.09 56.25
KRH73249 Soybean plastid 51.09 56.25
Solyc03g095780.1.1 Tomato plastid 49.34 56.22
CDY07739 Canola plastid 50.66 56.04
Bra000052.1-P Field mustard plastid 50.66 56.04
VIT_08s0058g00470.t01 Wine grape plastid 55.46 55.95
Solyc10g085310.1.1 Tomato plastid 51.97 55.87
CDY14471 Canola plastid 50.22 55.56
PGSC0003DMT400053120 Potato cytosol, plastid 48.47 55.22
PGSC0003DMT400053119 Potato cytosol, plastid 48.47 55.22
PGSC0003DMT400053102 Potato cytosol, plastid 48.47 55.22
Solyc10g076410.1.1 Tomato plastid 48.91 55.17
PGSC0003DMT400028658 Potato nucleus 51.09 54.93
Solyc05g052420.1.1 Tomato cytosol 19.65 54.88
PGSC0003DMT400041080 Potato mitochondrion 49.34 54.59
CDY04951 Canola cytosol 46.72 54.31
Solyc09g015380.1.1 Tomato plastid 47.6 54.23
CDX93191 Canola cytosol 48.03 54.19
Bra017012.1-P Field mustard cytosol 48.03 53.66
CDY52923 Canola cytosol 48.03 53.66
Os01t0827800-00 Rice plastid 59.39 53.12
Bra005115.1-P Field mustard plastid 34.5 53.02
PGSC0003DMT400075056 Potato plastid 49.34 52.8
KRH14908 Soybean plastid 50.22 52.75
AT5G05440.1 Thale cress cytosol 46.72 52.71
Bra009113.1-P Field mustard cytosol 46.72 52.45
CDX70150 Canola cytosol 46.72 52.45
CDX98844 Canola cytosol 46.72 52.45
PGSC0003DMT400061535 Potato plastid 49.78 52.29
CDY24911 Canola cytosol, mitochondrion 47.6 51.17
PGSC0003DMT400069734 Potato mitochondrion, plastid 46.29 50.96
Bra005853.1-P Field mustard cytosol 44.98 50.74
CDX80959 Canola cytosol 44.98 50.74
CDY72318 Canola cytosol 44.98 50.74
AT2G40330.1 Thale cress cytosol 47.6 50.7
Bra000184.1-P Field mustard cytosol, mitochondrion 46.72 50.47
CDX74796 Canola cytosol, nucleus, plastid 46.72 50.47
CDY07608 Canola cytosol, mitochondrion 46.72 50.47
Bra004967.1-P Field mustard mitochondrion 45.85 49.53
CDY18867 Canola cytosol, mitochondrion, nucleus, plastid 45.41 49.06
Os06t0562200-01 Rice cytosol 44.1 48.79
Os02t0226801-00 Rice cytosol 44.54 48.57
Os02t0255300-00 Rice cytosol, plastid 34.93 44.44
KRH31193 Soybean cytosol, golgi, plastid 49.78 44.36
Os02t0255500-01 Rice cytosol 39.3 44.12
Os10t0573400-01 Rice plasma membrane 39.74 42.92
Solyc06g050500.2.1 Tomato plastid 51.53 42.91
Os05t0213500-01 Rice cytosol, nucleus 38.43 42.11
Os06t0528300-00 Rice cytosol 33.62 37.38
Os06t0526400-00 Rice cytosol 31.88 37.24
Os06t0527800-01 Rice cytosol 33.19 36.89
Os06t0526466-00 Rice cytosol, mitochondrion 10.04 16.67
Protein Annotations
EnsemblPlants:Os03t0297600-01EnsemblPlantsGene:Os03g0297600EntrezGene:4332548Gene3D:3.30.530.20InterPro:IPR023393InterPro:Polyketide_cyclase/dehydratase
InterPro:START-like_dom_sfPANTHER:PTHR31213PANTHER:PTHR31213:SF3PFAM:PF10604ProteinID:ABF95453.1ProteinID:BAF11752.1
ProteinID:BAS83734.1RefSeq:XP_015628032.1SEG:segSUPFAM:SSF55961UniParc:UPI0000DB4976UniProt:Q10MS2
MapMan:11.1.2.1.1.1:::::
Description
PYRABACTIN RESISTANCE 1 LIKE/REGULATORY COMPONENTS OF ABA RECEPTOR 4, pyrabactin resistance-like 4Streptomyces cyclase/dehydrase family protein. (Os03t0297600-01)
Coordinates
chr3:-:10418661..10419833
Molecular Weight (calculated)
23805.3 Da
IEP (calculated)
7.620
GRAVY (calculated)
-0.010
Length
229 amino acids
Sequence
(BLAST)
001: MPCIPASSPG IPHQHQHQHH RALAGVGMAV GCAAEAAVAA AGVAGTRCGA HDGEVPMEVA RHHEHAEPGS GRCCSAVVQH VAAPAAAVWS VVRRFDQPQA
101: YKRFVRSCAL LAGDGGVGTL REVRVVSGLP AASSRERLEI LDDESHVLSF RVVGGEHRLK NYLSVTTVHP SPSAPTAATV VVESYVVDVP PGNTPEDTRV
201: FVDTIVKCNL QSLAKTAEKL AAGARAAGS
Best Arabidopsis Sequence Match ( AT2G38310.1 )
(BLAST)
001: MLAVHRPSSA VSDGDSVQIP MMIASFQKRF PSLSRDSTAA RFHTHEVGPN QCCSAVIQEI SAPISTVWSV VRRFDNPQAY KHFLKSCSVI GGDGDNVGSL
101: RQVHVVSGLP AASSTERLDI LDDERHVISF SVVGGDHRLS NYRSVTTLHP SPISGTVVVE SYVVDVPPGN TKEETCDFVD VIVRCNLQSL AKIAENTAAE
201: SKKKMSL
Arabidopsis Description
PYL4Abscisic acid receptor PYL4 [Source:UniProtKB/Swiss-Prot;Acc:O80920]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.