Factsheet for Os03t0268600-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
cytosol 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0648000-01
Os01t0827800-00
Os02t0194000-01
Os02t0226801-00
Os03t0297600-01
Os03t0832300-01
Os05t0428700-01
Os05t0473000-01
Os06t0562200-01
Os07t0150700-01
Os10t0573400-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G07430.1	Os07t0150700-01	AT1G30270.1	17898163
AT1G07430.1	Os01t0648000-01	AT2G26650.1	17898163
AT1G07430.1	Os03t0832300-01	AT3G06610.1	21798944
AT3G11410.1	Os02t0226801-00	AT1G73000.1	19407142
AT3G11410.1	Os06t0562200-01	AT1G73000.1	19407142
AT3G11410.1	Os02t0226801-00	AT2G26040.1	19407142
AT3G11410.1	Os06t0562200-01	AT2G26040.1	19407142
AT3G11410.1	Os02t0194000-01	AT2G33610.1	19033529
AT3G11410.1	Os01t0827800-00	AT2G38310.1	19407142
AT3G11410.1	Os03t0297600-01	AT2G38310.1	19407142
AT3G11410.1	Os05t0473000-01	AT2G38310.1	19407142
AT3G11410.1	Os10t0573400-01	AT4G17870.1	19407142
AT3G11410.1	Os05t0428700-01	AT4G22200.1	11181729
AT3G11410.1	Os05t0428700-01	AT4G22200.1	12034902
AT3G11410.1	Os10t0573400-01	AT5G46790.1	19407142
AT5G59220.1	Os01t0827800-00	AT2G38310.1	19407142
AT5G59220.1	Os03t0297600-01	AT2G38310.1	19407142
AT5G59220.1	Os05t0473000-01	AT2G38310.1	19407142
AT5G59220.1	Os10t0573400-01	AT4G17870.1	19407142

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU4Hr1G060370.1	Barley	nucleus	77.23	78.0
Zm00001d028574_P001	Maize	nucleus	75.99	77.53
TraesCS4D01G210900.1	Wheat	nucleus	77.97	76.83
TraesCS4A01G094300.1	Wheat	nucleus	77.72	76.77
EER92493	Sorghum	nucleus	75.99	76.56
TraesCS4B01G210100.1	Wheat	nucleus	76.49	76.11
GSMUA_AchrUn_...	Banana	cytosol	42.82	61.13
GSMUA_Achr6P15180_001	Banana	cytosol	52.72	57.57
Os09t0325700-01	Rice	cytosol	49.51	55.87
CDY18067	Canola	cytosol	7.92	54.24
Os01t0846300-01	Rice	cytosol, mitochondrion, nucleus, plastid	54.95	53.62
CDY67257	Canola	nucleus	48.02	52.29
CDY67227	Canola	cytosol	48.02	52.29
AT2G29380.1	Thale cress	nucleus	46.78	52.21
VIT_06s0004g05460.t01	Wine grape	nucleus	50.74	52.16
CDY40181	Canola	cytosol	46.53	51.37
Bra018398.1-P	Field mustard	cytosol	46.53	51.37
Bra002038.1-P	Field mustard	nucleus	48.27	51.32
KRH31027	Soybean	cytosol	50.74	51.12
CDY45436	Canola	cytosol	46.29	51.09
VIT_13s0019g02200.t01	Wine grape	plastid	50.49	51.0
KRG97855	Soybean	cytosol	50.49	51.0
KRH15068	Soybean	cytosol	50.25	50.75
Solyc05g052980.2.1	Tomato	nucleus	51.24	50.61
Bra002594.1-P	Field mustard	plastid	51.49	50.49
AT3G11410.1	Thale cress	cytosol	49.75	50.38
CDY01017	Canola	nucleus	48.76	50.13
AT5G59220.1	Thale cress	nucleus	51.24	50.12
KRH73525	Soybean	cytosol, mitochondrion, peroxisome, plastid	13.12	50.0
CDY08530	Canola	nucleus	48.51	49.87
KRH73067	Soybean	cytosol	50.0	49.63
Solyc03g096670.2.1	Tomato	nucleus	49.75	49.51
CDX80307	Canola	nucleus, plastid	48.27	49.24
CDY33008	Canola	nucleus, plastid	48.02	49.11
PGSC0003DMT400069947	Potato	cytosol	50.74	49.04
CDY06705	Canola	nucleus	47.28	48.97
PGSC0003DMT400043146	Potato	nucleus	49.51	48.78
Bra034845.1-P	Field mustard	nucleus	48.02	48.62
PGSC0003DMT400077989	Potato	cytosol	47.28	46.59
CDY10275	Canola	nucleus	49.26	46.28
Os05t0572700-02	Rice	cytosol	43.56	46.19
Solyc06g076400.2.1	Tomato	nucleus	46.53	45.85
Bra015579.1-P	Field mustard	nucleus	48.27	45.77
AT1G07430.1	Thale cress	nucleus	49.75	45.48
Bra031574.1-P	Field mustard	nucleus	48.51	44.95
CDY06259	Canola	nucleus	48.51	44.95
Os01t0656200-01	Rice	cytosol, nucleus, plastid	43.56	43.67
Bra030455.1-P	Field mustard	cytosol	16.34	41.51
Os04t0167875-00	Rice	nucleus, peroxisome, plastid	7.92	37.21
CDY36606	Canola	nucleus	22.03	35.6
Os01t0583100-01	Rice	cytosol	34.65	35.35
Os04t0167900-00	Rice	cytosol	17.08	32.24
Os05t0592800-02	Rice	endoplasmic reticulum, vacuole	34.9	31.69
Os05t0537400-00	Rice	cytosol	22.52	30.74
Os11t0586001-00	Rice	golgi	22.52	18.24
PGSC0003DMT400049695	Potato	extracellular	2.97	10.91
Os11t0586100-01	Rice	cytosol	0.5	0.65

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.1	EntrezGene:4332374	ProteinID:AAP06902.1	ProteinID:AAP06912.1
ProteinID:ABF95181.1	EMBL:AK069274	ProteinID:BAF11588.1	ProteinID:BAS83449.1	ProteinID:EAZ26392.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0004721	GO:GO:0004722	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006464	GO:GO:0006470	GO:GO:0007154
GO:GO:0007165	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009719	GO:GO:0009738
GO:GO:0009791	GO:GO:0009845	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0043169
GO:GO:0046872	GO:GO:0090351	InterPro:IPR001932	InterPro:IPR036457	EnsemblPlantsGene:Os03g0268600	EnsemblPlants:Os03t0268600-01
PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032
PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF532	UniProt:Q84JI0	SMART:SM00332	SUPFAM:SSF81606
UniParc:UPI000018DC1D	RefSeq:XP_015628825.1	SEG:seg	:	:	:

Description

protein phosphatase 2C30, protein phosphatase 2C 30, protein phosphatase 48Similar to Protein phosphatase type 2C. (Os03t0268600-01)

Coordinates

chr3:-:8921424..8923437

Molecular Weight (calculated)

43284.8 Da

IEP (calculated)

5.714

GRAVY (calculated)

-0.407

Length

404 amino acids

Sequence
(BLAST)

001: MAEICCEVVA GSSSEGKGPE CDTGSRAARR RRMEIRRLRV VAERGAEEET SGKRRRLDGG GGEASTDEED REVERARYGF TSVCGRRRDM EDSVSACPGF
101: LPGHHFFGVF DGHGCSHVAT SCGQRMHEIV VDEAGAAAGS AGLDEEARWR GVMERSFARM DAEAVASSRG SVAPAPTCRC EMQLPKCDHV GSTAVVAVLG
201: PRHVVVANCG DSRAVLCRGG AAIPLSCDHK PDRPDELERI HAAGGRVIFW DGARVFGMLA MSRAIGDSYL KPYVICDPEV RVMERKDGED EFLILASDGL
301: WDVVSNEVAC NVVRACLRSS GRRERNRSSP TSNLSPRQSS SSGDEAPNDG APSAAAGSES DEESAAEEDK ACAEAAVLLT KLALARQTSD NVSVVVVNLR
401: RRKL

Best Arabidopsis Sequence Match ( AT1G07430.1 )
(BLAST)

001: MADICYEDET SACESRPLWS SRKWRIGVQR FRMSPSEMNP TASTTEEEDK SEGIYNKRNK QEEYDFMNCA SSSPSQSSPE EESVSLEDSD VSISDGNSSV
101: NDVAVIPSKK TVKETDLRPR YGVASVCGRR RDMEDAVALH PSFVRKQTEF SRTRWHYFGV YDGHGCSHVA ARCKERLHEL VQEEALSDKK EEWKKMMERS
201: FTRMDKEVVR WGETVMSANC RCELQTPDCD AVGSTAVVSV ITPEKIIVAN CGDSRAVLCR NGKAVPLSTD HKPDRPDELD RIQEAGGRVI YWDGARVLGV
301: LAMSRAIGDN YLKPYVTSEP EVTVTDRTEE DEFLILATDG LWDVVTNEAA CTMVRMCLNR KSGRGRRRGE TQTPGRRSEE EGKEEEEKVV GSRKNGKRGE
401: ITDKACTEAS VLLTKLALAK HSSDNVSVVV IDLRRRRKRH VA

Arabidopsis Description

AIP1Protein phosphatase 2C 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNW3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.