Factsheet for Os03t0832300-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1
extracellular 1
golgi 1
plasma membrane 1
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0846300-01
Os03t0268600-01
Os04t0654700-02
Os09t0325700-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G06610.1	Os04t0654700-02	AT1G22920.1	21798944
AT3G06610.1	Os04t0654700-02	AT1G71230.1	21798944
AT3G06610.1	Os01t0846300-01	AT2G29380.1	21798944
AT3G06610.1	Os03t0268600-01	AT2G29380.1	21798944
AT3G06610.1	Os09t0325700-01	AT2G29380.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G363500.1	Wheat	cytosol	89.76	89.76
TraesCS5B01G509900.1	Wheat	cytosol	88.19	87.5
TraesCS5D01G510000.1	Wheat	cytosol	87.4	86.72
GSMUA_Achr2P02080_001	Banana	cytosol	76.38	85.84
EER93155	Sorghum	cytosol, mitochondrion, nucleus	83.46	85.48
Solyc12g099240.1.1	Tomato	cytosol	68.5	79.09
PGSC0003DMT400011768	Potato	cytosol	68.5	79.09
KRH50722	Soybean	endoplasmic reticulum	67.72	78.18
KRH02360	Soybean	nucleus	67.72	78.18
VIT_05s0077g00910.t01	Wine grape	cytosol	66.93	77.27
KRH11935	Soybean	nucleus	66.93	77.27
KRH36967	Soybean	cytosol	65.35	75.45
AT3G06610.1	Thale cress	cytosol	66.14	73.04
CDY34941	Canola	cytosol	65.35	72.17
CDY34938	Canola	cytosol	65.35	72.17
Bra040280.1-P	Field mustard	cytosol	65.35	72.17
HORVU5Hr1G116650.1	Barley	mitochondrion	84.25	71.33
Bra029592.1-P	Field mustard	cytosol	63.78	70.43
CDY24678	Canola	cytosol	63.78	70.43
CDY05281	Canola	cytosol	63.78	70.43
Zm00001d042829_P001	Maize	cytosol	32.28	47.13
Zm00001d038949_P001	Maize	cytosol	30.71	45.35

Protein Annotations

MapMan:35.2	EntrezGene:4334676	ProteinID:AAP46259.1	ProteinID:ABF99719.1	EMBL:AK101289	ProteinID:BAF13714.1
ProteinID:BAS87213.1	ncoils:Coil	ProteinID:EEE60238.1	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005829	InterPro:HYPK_UBA	EnsemblPlantsGene:Os03g0832300	EnsemblPlants:Os03t0832300-01	PANTHER:PTHR31184
UniProt:Q7Y139	UniParc:UPI00001A2F1E	RefSeq:XP_015628669.1	SEG:seg	:	:

Description

Similar to huntingtin interacting protein K. (Os03t0832300-01)

Coordinates

chr3:-:34957024..34959386

Molecular Weight (calculated)

13327.7 Da

IEP (calculated)

4.816

GRAVY (calculated)

-0.261

Length

127 amino acids

Sequence
(BLAST)

001: MAAAGDESAA AAAAAAAAAG GAAAGEAAVD SKDLQQQSKA LDKLTDRVED RQLDSSRVQS AMAALASSKE ADWNAMRLRE KELAAIKINP ADVEIIANEL
101: ELDKKIAERT LREHKGDAVA AVRFLLR

Best Arabidopsis Sequence Match ( AT3G06610.1 )
(BLAST)

001: MEGAEEAGAE IAVDSKDLQQ QSKAFDKLTD RVEDRQLDSS RVQSAMASIA ASREADLNAK RLREKELASV KINPADVEFI VNELEIEKNV AERTLREHKG
101: DAVAATRQLL SRYPL

Arabidopsis Description

DNA-binding enhancer protein-like protein [Source:UniProtKB/TrEMBL;Acc:Q9C901]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.