Skip to main content
crop-pal logo
Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, plastid, nucleus, cytosol

Predictor Summary:
  • nucleus 3
  • cytosol 2
  • plastid 2
  • mitochondrion 1
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3A01G362200.1 Wheat nucleus, plastid 71.01 75.19
Zm00001d042886_P001 Maize nucleus 73.91 75.0
EES01744 Sorghum plastid 74.4 74.76
TraesCS3D01G355900.1 Wheat plastid 70.77 73.8
HORVU3Hr1G085930.3 Barley nucleus, plastid 69.81 73.54
Zm00001d012401_P001 Maize cytosol, mitochondrion, nucleus, plastid 72.71 72.88
TraesCS3B01G394600.3 Wheat plastid 71.01 68.69
GSMUA_AchrUn_... Banana cytosol 45.17 66.08
CDY18067 Canola cytosol 8.94 62.71
GSMUA_Achr6P15180_001 Banana cytosol 53.86 60.27
Os09t0325700-01 Rice cytosol 48.79 56.42
Os03t0268600-01 Rice nucleus 53.62 54.95
CDY67257 Canola nucleus 48.55 54.18
CDY67227 Canola cytosol 48.07 53.64
AT2G29380.1 Thale cress nucleus 46.38 53.04
Bra018398.1-P Field mustard cytosol 46.62 52.73
CDY45436 Canola cytosol 46.62 52.73
Bra002038.1-P Field mustard nucleus 48.31 52.63
CDY40181 Canola cytosol 46.14 52.19
VIT_13s0019g02200.t01 Wine grape plastid 50.0 51.75
Solyc05g052980.2.1 Tomato nucleus 50.72 51.34
KRH15068 Soybean cytosol 49.28 51.0
KRG97855 Soybean cytosol 49.03 50.75
CDY08530 Canola nucleus 48.07 50.64
CDY01017 Canola nucleus 47.83 50.38
KRH31027 Soybean cytosol 48.79 50.37
AT3G11410.1 Thale cress cytosol 48.31 50.13
KRH73067 Soybean cytosol 49.03 49.88
VIT_06s0004g05460.t01 Wine grape nucleus 47.34 49.87
Bra034845.1-P Field mustard nucleus 47.83 49.62
PGSC0003DMT400069947 Potato cytosol 50.0 49.52
CDY06705 Canola nucleus 46.62 49.49
Solyc03g096670.2.1 Tomato nucleus 48.31 49.26
PGSC0003DMT400043146 Potato nucleus 47.83 48.29
AT5G59220.1 Thale cress nucleus 47.1 47.22
Bra002594.1-P Field mustard plastid 46.86 47.09
CDY10275 Canola nucleus 48.31 46.51
Bra015579.1-P Field mustard nucleus 47.58 46.24
PGSC0003DMT400077989 Potato cytosol 45.65 46.1
CDX80307 Canola nucleus, plastid 43.96 45.96
Os05t0572700-02 Rice cytosol 42.27 45.93
CDY33008 Canola nucleus, plastid 43.72 45.82
KRH73525 Soybean cytosol, mitochondrion, peroxisome, plastid 11.59 45.28
Solyc06g076400.2.1 Tomato nucleus 44.44 44.88
AT1G07430.1 Thale cress nucleus 47.83 44.8
Bra031574.1-P Field mustard nucleus 46.14 43.81
CDY06259 Canola nucleus 45.89 43.58
Os01t0656200-01 Rice cytosol, nucleus, plastid 41.3 42.43
Bra030455.1-P Field mustard cytosol 16.18 42.14
Os04t0167875-00 Rice nucleus, peroxisome, plastid 8.21 39.53
CDY36606 Canola nucleus 20.77 34.4
Os01t0583100-01 Rice cytosol 32.85 34.34
Os05t0537400-00 Rice cytosol 23.67 33.11
Os05t0592800-02 Rice endoplasmic reticulum, vacuole 33.57 31.24
Os04t0167900-00 Rice cytosol 15.22 29.44
Os11t0586001-00 Rice golgi 21.5 17.84
PGSC0003DMT400049695 Potato extracellular 3.38 12.73
Os11t0586100-01 Rice cytosol 0.0 0.0
Protein Annotations
KEGG:04658+3.1.3.16KEGG:04660+3.1.3.16MapMan:18.4.24.2.1Gene3D:3.60.40.10EntrezGene:4327465EMBL:AK065949
ProteinID:BAD81824.1ProteinID:BAD81825.1ProteinID:BAD81826.1ProteinID:BAF06702.1ProteinID:BAS75198.1ProteinID:EEE55662.1
GO:GO:0003674GO:GO:0003824GO:GO:0004721GO:GO:0004722GO:GO:0005488GO:GO:0005575
GO:GO:0006464GO:GO:0006470GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016020
GO:GO:0016021GO:GO:0016787GO:GO:0019538GO:GO:0043169GO:GO:0046872InterPro:IPR001932
InterPro:IPR036457EnsemblPlantsGene:Os01g0846300EnsemblPlants:Os01t0846300-01PFAM:PF00481InterPro:PP2CInterPro:PP2C_BS
InterPro:PPM-type_dom_sfInterPro:PPM-type_phosphatase_domScanProsite:PS01032PFscan:PS51746PANTHER:PTHR13832PANTHER:PTHR13832:SF532
UniProt:Q5N9N2SMART:SM00332SUPFAM:SSF81606TMHMM:TMhelixUniParc:UPI000049E8BCRefSeq:XP_015621342.1
SEG:seg:::::
Description
protein phosphatase 15, protein phosphatase 2C09, protein phosphatase 2C9, protein phosphatase 2C 9Similar to Protein phosphatase 2C. (Os01t0846300-01);Similar to protein phosphatase 2C. (Os01t0846300-02)
Coordinates
chr1:+:36343948..36346009
Molecular Weight (calculated)
43989.5 Da
IEP (calculated)
5.251
GRAVY (calculated)
-0.348
Length
414 amino acids
Sequence
(BLAST)
001: MAEICCEEAM SPPATATAAV AAAVSASAAA AVSSAIDRRR RRMEMRRIRI ASDLELQAGE DGRPGKRQRL ARTASGAPRP DEDSASERPS CGRTEEFPRY
101: GVTAVCGRRR EMEDAVSIRP DFLPASGKFH FYGVFDGHGC SHVATTCQDR MHEIVAEEHN KGASGEVAPW RDVMEKSFAR MDGEVGNRAS TRSDDEPACP
201: CEQQTPSRRD HAGSTAVVAV VSPTQVVVAN AGDSRAVISR AGVPVALSVD HKPDRPDELE RIEAAGGRVI YWDGARVLGV LAMSRAIGDG YLKPYVTSEP
301: EVTVTERTDD DECLILASDG LWDVVTNEMA CEVVRACFHN NGPPAPAARP SGVPSSAEAA ETENGGAASV KGISKAESSD KACSDAAMLL TKLALARRSA
401: DNVSVVVVDL RRGL
Best Arabidopsis Sequence Match ( AT1G07430.1 )
(BLAST)
001: MADICYEDET SACESRPLWS SRKWRIGVQR FRMSPSEMNP TASTTEEEDK SEGIYNKRNK QEEYDFMNCA SSSPSQSSPE EESVSLEDSD VSISDGNSSV
101: NDVAVIPSKK TVKETDLRPR YGVASVCGRR RDMEDAVALH PSFVRKQTEF SRTRWHYFGV YDGHGCSHVA ARCKERLHEL VQEEALSDKK EEWKKMMERS
201: FTRMDKEVVR WGETVMSANC RCELQTPDCD AVGSTAVVSV ITPEKIIVAN CGDSRAVLCR NGKAVPLSTD HKPDRPDELD RIQEAGGRVI YWDGARVLGV
301: LAMSRAIGDN YLKPYVTSEP EVTVTDRTEE DEFLILATDG LWDVVTNEAA CTMVRMCLNR KSGRGRRRGE TQTPGRRSEE EGKEEEEKVV GSRKNGKRGE
401: ITDKACTEAS VLLTKLALAK HSSDNVSVVV IDLRRRRKRH VA
Arabidopsis Description
AIP1Protein phosphatase 2C 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNW3]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.