Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- plastid 2
- mitochondrion 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS3A01G362200.1 | Wheat | nucleus, plastid | 71.01 | 75.19 |
Zm00001d042886_P001 | Maize | nucleus | 73.91 | 75.0 |
EES01744 | Sorghum | plastid | 74.4 | 74.76 |
TraesCS3D01G355900.1 | Wheat | plastid | 70.77 | 73.8 |
HORVU3Hr1G085930.3 | Barley | nucleus, plastid | 69.81 | 73.54 |
Zm00001d012401_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 72.71 | 72.88 |
TraesCS3B01G394600.3 | Wheat | plastid | 71.01 | 68.69 |
GSMUA_AchrUn_... | Banana | cytosol | 45.17 | 66.08 |
CDY18067 | Canola | cytosol | 8.94 | 62.71 |
GSMUA_Achr6P15180_001 | Banana | cytosol | 53.86 | 60.27 |
Os09t0325700-01 | Rice | cytosol | 48.79 | 56.42 |
Os03t0268600-01 | Rice | nucleus | 53.62 | 54.95 |
CDY67257 | Canola | nucleus | 48.55 | 54.18 |
CDY67227 | Canola | cytosol | 48.07 | 53.64 |
AT2G29380.1 | Thale cress | nucleus | 46.38 | 53.04 |
Bra018398.1-P | Field mustard | cytosol | 46.62 | 52.73 |
CDY45436 | Canola | cytosol | 46.62 | 52.73 |
Bra002038.1-P | Field mustard | nucleus | 48.31 | 52.63 |
CDY40181 | Canola | cytosol | 46.14 | 52.19 |
VIT_13s0019g02200.t01 | Wine grape | plastid | 50.0 | 51.75 |
Solyc05g052980.2.1 | Tomato | nucleus | 50.72 | 51.34 |
KRH15068 | Soybean | cytosol | 49.28 | 51.0 |
KRG97855 | Soybean | cytosol | 49.03 | 50.75 |
CDY08530 | Canola | nucleus | 48.07 | 50.64 |
CDY01017 | Canola | nucleus | 47.83 | 50.38 |
KRH31027 | Soybean | cytosol | 48.79 | 50.37 |
AT3G11410.1 | Thale cress | cytosol | 48.31 | 50.13 |
KRH73067 | Soybean | cytosol | 49.03 | 49.88 |
VIT_06s0004g05460.t01 | Wine grape | nucleus | 47.34 | 49.87 |
Bra034845.1-P | Field mustard | nucleus | 47.83 | 49.62 |
PGSC0003DMT400069947 | Potato | cytosol | 50.0 | 49.52 |
CDY06705 | Canola | nucleus | 46.62 | 49.49 |
Solyc03g096670.2.1 | Tomato | nucleus | 48.31 | 49.26 |
PGSC0003DMT400043146 | Potato | nucleus | 47.83 | 48.29 |
AT5G59220.1 | Thale cress | nucleus | 47.1 | 47.22 |
Bra002594.1-P | Field mustard | plastid | 46.86 | 47.09 |
CDY10275 | Canola | nucleus | 48.31 | 46.51 |
Bra015579.1-P | Field mustard | nucleus | 47.58 | 46.24 |
PGSC0003DMT400077989 | Potato | cytosol | 45.65 | 46.1 |
CDX80307 | Canola | nucleus, plastid | 43.96 | 45.96 |
Os05t0572700-02 | Rice | cytosol | 42.27 | 45.93 |
CDY33008 | Canola | nucleus, plastid | 43.72 | 45.82 |
KRH73525 | Soybean | cytosol, mitochondrion, peroxisome, plastid | 11.59 | 45.28 |
Solyc06g076400.2.1 | Tomato | nucleus | 44.44 | 44.88 |
AT1G07430.1 | Thale cress | nucleus | 47.83 | 44.8 |
Bra031574.1-P | Field mustard | nucleus | 46.14 | 43.81 |
CDY06259 | Canola | nucleus | 45.89 | 43.58 |
Os01t0656200-01 | Rice | cytosol, nucleus, plastid | 41.3 | 42.43 |
Bra030455.1-P | Field mustard | cytosol | 16.18 | 42.14 |
Os04t0167875-00 | Rice | nucleus, peroxisome, plastid | 8.21 | 39.53 |
CDY36606 | Canola | nucleus | 20.77 | 34.4 |
Os01t0583100-01 | Rice | cytosol | 32.85 | 34.34 |
Os05t0537400-00 | Rice | cytosol | 23.67 | 33.11 |
Os05t0592800-02 | Rice | endoplasmic reticulum, vacuole | 33.57 | 31.24 |
Os04t0167900-00 | Rice | cytosol | 15.22 | 29.44 |
Os11t0586001-00 | Rice | golgi | 21.5 | 17.84 |
PGSC0003DMT400049695 | Potato | extracellular | 3.38 | 12.73 |
Os11t0586100-01 | Rice | cytosol | 0.0 | 0.0 |
Protein Annotations
KEGG:04658+3.1.3.16 | KEGG:04660+3.1.3.16 | MapMan:18.4.24.2.1 | Gene3D:3.60.40.10 | EntrezGene:4327465 | EMBL:AK065949 |
ProteinID:BAD81824.1 | ProteinID:BAD81825.1 | ProteinID:BAD81826.1 | ProteinID:BAF06702.1 | ProteinID:BAS75198.1 | ProteinID:EEE55662.1 |
GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004721 | GO:GO:0004722 | GO:GO:0005488 | GO:GO:0005575 |
GO:GO:0006464 | GO:GO:0006470 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016020 |
GO:GO:0016021 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0043169 | GO:GO:0046872 | InterPro:IPR001932 |
InterPro:IPR036457 | EnsemblPlantsGene:Os01g0846300 | EnsemblPlants:Os01t0846300-01 | PFAM:PF00481 | InterPro:PP2C | InterPro:PP2C_BS |
InterPro:PPM-type_dom_sf | InterPro:PPM-type_phosphatase_dom | ScanProsite:PS01032 | PFscan:PS51746 | PANTHER:PTHR13832 | PANTHER:PTHR13832:SF532 |
UniProt:Q5N9N2 | SMART:SM00332 | SUPFAM:SSF81606 | TMHMM:TMhelix | UniParc:UPI000049E8BC | RefSeq:XP_015621342.1 |
SEG:seg | : | : | : | : | : |
Description
protein phosphatase 15, protein phosphatase 2C09, protein phosphatase 2C9, protein phosphatase 2C 9Similar to Protein phosphatase 2C. (Os01t0846300-01);Similar to protein phosphatase 2C. (Os01t0846300-02)
Coordinates
chr1:+:36343948..36346009
Molecular Weight (calculated)
43989.5 Da
IEP (calculated)
5.251
GRAVY (calculated)
-0.348
Length
414 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEICCEEAM SPPATATAAV AAAVSASAAA AVSSAIDRRR RRMEMRRIRI ASDLELQAGE DGRPGKRQRL ARTASGAPRP DEDSASERPS CGRTEEFPRY
101: GVTAVCGRRR EMEDAVSIRP DFLPASGKFH FYGVFDGHGC SHVATTCQDR MHEIVAEEHN KGASGEVAPW RDVMEKSFAR MDGEVGNRAS TRSDDEPACP
201: CEQQTPSRRD HAGSTAVVAV VSPTQVVVAN AGDSRAVISR AGVPVALSVD HKPDRPDELE RIEAAGGRVI YWDGARVLGV LAMSRAIGDG YLKPYVTSEP
301: EVTVTERTDD DECLILASDG LWDVVTNEMA CEVVRACFHN NGPPAPAARP SGVPSSAEAA ETENGGAASV KGISKAESSD KACSDAAMLL TKLALARRSA
401: DNVSVVVVDL RRGL
101: GVTAVCGRRR EMEDAVSIRP DFLPASGKFH FYGVFDGHGC SHVATTCQDR MHEIVAEEHN KGASGEVAPW RDVMEKSFAR MDGEVGNRAS TRSDDEPACP
201: CEQQTPSRRD HAGSTAVVAV VSPTQVVVAN AGDSRAVISR AGVPVALSVD HKPDRPDELE RIEAAGGRVI YWDGARVLGV LAMSRAIGDG YLKPYVTSEP
301: EVTVTERTDD DECLILASDG LWDVVTNEMA CEVVRACFHN NGPPAPAARP SGVPSSAEAA ETENGGAASV KGISKAESSD KACSDAAMLL TKLALARRSA
401: DNVSVVVVDL RRGL
001: MADICYEDET SACESRPLWS SRKWRIGVQR FRMSPSEMNP TASTTEEEDK SEGIYNKRNK QEEYDFMNCA SSSPSQSSPE EESVSLEDSD VSISDGNSSV
101: NDVAVIPSKK TVKETDLRPR YGVASVCGRR RDMEDAVALH PSFVRKQTEF SRTRWHYFGV YDGHGCSHVA ARCKERLHEL VQEEALSDKK EEWKKMMERS
201: FTRMDKEVVR WGETVMSANC RCELQTPDCD AVGSTAVVSV ITPEKIIVAN CGDSRAVLCR NGKAVPLSTD HKPDRPDELD RIQEAGGRVI YWDGARVLGV
301: LAMSRAIGDN YLKPYVTSEP EVTVTDRTEE DEFLILATDG LWDVVTNEAA CTMVRMCLNR KSGRGRRRGE TQTPGRRSEE EGKEEEEKVV GSRKNGKRGE
401: ITDKACTEAS VLLTKLALAK HSSDNVSVVV IDLRRRRKRH VA
101: NDVAVIPSKK TVKETDLRPR YGVASVCGRR RDMEDAVALH PSFVRKQTEF SRTRWHYFGV YDGHGCSHVA ARCKERLHEL VQEEALSDKK EEWKKMMERS
201: FTRMDKEVVR WGETVMSANC RCELQTPDCD AVGSTAVVSV ITPEKIIVAN CGDSRAVLCR NGKAVPLSTD HKPDRPDELD RIQEAGGRVI YWDGARVLGV
301: LAMSRAIGDN YLKPYVTSEP EVTVTDRTEE DEFLILATDG LWDVVTNEAA CTMVRMCLNR KSGRGRRRGE TQTPGRRSEE EGKEEEEKVV GSRKNGKRGE
401: ITDKACTEAS VLLTKLALAK HSSDNVSVVV IDLRRRRKRH VA
Arabidopsis Description
AIP1Protein phosphatase 2C 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNW3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.