Factsheet for Bra002594.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
cytosol 2
peroxisome 1
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000052.1-P
Bra012635.1-P
Bra013262.1-P
Bra021032.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G59220.1	Bra000052.1-P	AT2G38310.1	19407142
AT5G59220.1	Bra012635.1-P	AT4G17870.1	19407142
AT5G59220.1	Bra013262.1-P	AT4G17870.1	19407142
AT5G59220.1	Bra021032.1-P	AT4G17870.1	19407142

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY33008	Canola	nucleus, plastid	95.15	99.24
AT5G59220.1	Thale cress	nucleus	83.98	83.78
VIT_06s0004g05460.t01	Wine grape	nucleus	58.74	61.58
Bra018398.1-P	Field mustard	cytosol	54.13	60.93
GSMUA_AchrUn_...	Banana	cytosol	41.26	60.07
KXG35986	Sorghum	cytosol, peroxisome, plastid	29.37	59.61
GSMUA_Achr6P15180_001	Banana	cytosol	50.0	55.68
Bra002038.1-P	Field mustard	nucleus	51.21	55.53
Solyc06g076400.2.1	Tomato	nucleus	55.1	55.37
Zm00001d005609_P001	Maize	cytosol, mitochondrion, nucleus, plastid	46.12	54.29
EER96576	Sorghum	cytosol	46.6	53.78
Bra034845.1-P	Field mustard	nucleus	51.94	53.63
Bra015579.1-P	Field mustard	nucleus	55.1	53.29
GSMUA_Achr11P...	Banana	cytosol	50.0	52.15
TraesCS5A01G183600.1	Wheat	peroxisome	44.17	52.15
Bra031574.1-P	Field mustard	nucleus	55.1	52.06
TraesCS4B01G210100.1	Wheat	nucleus	50.97	51.72
Os09t0325700-01	Rice	cytosol	44.9	51.68
TraesCS5D01G188600.1	Wheat	peroxisome	43.69	51.58
GSMUA_Achr5P29000_001	Banana	cytosol	47.82	51.57
HORVU4Hr1G060370.1	Barley	nucleus	50.0	51.5
Os03t0268600-01	Rice	nucleus	50.49	51.49
TraesCS5B01G182000.1	Wheat	peroxisome	43.45	51.29
Zm00001d020100_P001	Maize	mitochondrion, nucleus, peroxisome, plastid	44.42	51.12
Zm00001d028574_P001	Maize	nucleus	48.54	50.51
TraesCS4D01G210900.1	Wheat	nucleus	50.0	50.24
EER92493	Sorghum	nucleus	48.79	50.12
TraesCS4A01G094300.1	Wheat	nucleus	49.27	49.63
TraesCS3D01G355900.1	Wheat	plastid	46.84	48.61
HORVU3Hr1G085930.3	Barley	nucleus, plastid	46.36	48.6
TraesCS3A01G362200.1	Wheat	nucleus, plastid	46.12	48.59
EES01744	Sorghum	plastid	47.33	47.33
Zm00001d042886_P001	Maize	nucleus	46.84	47.3
Zm00001d012401_P001	Maize	cytosol, mitochondrion, nucleus, plastid	47.33	47.22
Os01t0846300-01	Rice	cytosol, mitochondrion, nucleus, plastid	47.09	46.86
TraesCS3B01G394600.3	Wheat	plastid	46.84	45.09
Bra030455.1-P	Field mustard	cytosol	16.99	44.03
KXG22152	Sorghum	nucleus	47.33	42.03
Bra029160.1-P	Field mustard	cytosol	39.56	39.0
Bra019121.1-P	Field mustard	cytosol	36.41	36.32
Bra010441.1-P	Field mustard	cytosol	36.89	36.02
Bra013945.1-P	Field mustard	cytosol	36.89	35.76
Bra016595.1-P	Field mustard	cytosol	35.19	35.37
Bra002766.1-P	Field mustard	cytosol	34.95	34.12
Bra016034.1-P	Field mustard	cytosol, peroxisome, plastid	35.68	30.37
Bra025964.1-P	Field mustard	cytosol	34.71	28.15
PGSC0003DMT400049695	Potato	extracellular	2.43	9.09
Bra040446.1-P	Field mustard	plasma membrane, vacuole	19.66	7.65

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.1	Gene3D:3.60.40.10	EnsemblPlantsGene:Bra002594	EnsemblPlants:Bra002594.1
EnsemblPlants:Bra002594.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0004722	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0005794	GO:GO:0005829	GO:GO:0006464
GO:GO:0006470	GO:GO:0006950	GO:GO:0007154	GO:GO:0007165	GO:GO:0007275	GO:GO:0008150
GO:GO:0008152	GO:GO:0009414	GO:GO:0009628	GO:GO:0009658	GO:GO:0009719	GO:GO:0009737
GO:GO:0009788	GO:GO:0009987	GO:GO:0010118	GO:GO:0010150	GO:GO:0016020	GO:GO:0016043
GO:GO:0016787	GO:GO:0019538	GO:GO:0033106	InterPro:IPR001932	InterPro:IPR036457	UniProt:M4CEG3
PFAM:PF00481	InterPro:PP2C	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	PFscan:PS51746	PANTHER:PTHR13832
PANTHER:PTHR13832:SF518	SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI000254393F	SEG:seg	:

Description

AT5G59220 (E=5e-154) | protein phosphatase 2C, putative / PP2C, putative

Coordinates

chrA10:+:8692935..8694778

Molecular Weight (calculated)

45666.1 Da

IEP (calculated)

6.276

GRAVY (calculated)

-0.337

Length

412 amino acids

Sequence
(BLAST)

001: MAEICYENES VITKTTSTVV TRTAATTTTK RRERSSSQAA RRRRMEIRRY KFVSGEQDPV FVDGELQRRG RRESTVIYEL AKTETAKEVV VLCESLSSTV
101: MALPDPDAYP KYGVASVCGR RREMEDAVAV HPFFYRQQTE FSSFGYHFCG VYDGHGCSHV AMRCRERLHE LVREELEADD ADWEKSMSRS FTRMDLEAVA
201: LNEGGTANCR CELQRPECDA VGSTAVVSIL TPEKIVVANC GDSRAVLCRN GKAIPLSSDH KPDRPDELDR IQAAGGRVIY WDGPRVLGVL AMSRAIGDNY
301: LKPYVISKPE VTVTDRVKQD EFLILASDGL WDVVSNETAC NVVRMCLKRK VNSQLTSSPE NDVAGAGNVV VVGGDVSNKA CDEASILLTR LALARQSSDN
401: VSVVVVDLRR DT

Best Arabidopsis Sequence Match ( AT5G59220.1 )
(BLAST)

001: MAEICYENET MMIETTATVV KKATTTTRRR ERSSSQAARR RRMEIRRFKF VSGEQEPVFV DGDLQRRRRR ESTVAASTST VFYETAKEVV VLCESLSSTV
101: VALPDPEAYP KYGVASVCGR RREMEDAVAV HPFFSRHQTE YSSTGFHYCG VYDGHGCSHV AMKCRERLHE LVREEFEADA DWEKSMARSF TRMDMEVVAL
201: NADGAAKCRC ELQRPDCDAV GSTAVVSVLT PEKIIVANCG DSRAVLCRNG KAIALSSDHK PDRPDELDRI QAAGGRVIYW DGPRVLGVLA MSRAIGDNYL
301: KPYVISRPEV TVTDRANGDD FLILASDGLW DVVSNETACS VVRMCLRGKV NGQVSSSPER EMTGVGAGNV VVGGGDLPDK ACEEASLLLT RLALARQSSD
401: NVSVVVVDLR RDT

Arabidopsis Description

SAG113Probable protein phosphatase 2C 78 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIF5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.