Factsheet for Bra013945.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000052.1-P
Bra000184.1-P
Bra000938.1-P
Bra002289.1-P
Bra003077.1-P
Bra004967.1-P
Bra005853.1-P
Bra009113.1-P
Bra010735.1-P
Bra011481.1-P
Bra012113.1-P
Bra012635.1-P
Bra013262.1-P
Bra017012.1-P
Bra017526.1-P
Bra017615.1-P
Bra020096.1-P
Bra021032.1-P
Bra021864.1-P
Bra022418.1-P
Bra022634.1-P
Bra024452.1-P
Bra024995.1-P
Bra026299.1-P
Bra028758.1-P
Bra029093.1-P
Bra033261.1-P
Bra033267.1-P
Bra033573.1-P
Bra035236.1-P
Bra036488.1-P
Bra038206.1-P
Bra038208.1-P
Bra038835.1-P
Bra039782.1-P
Bra039787.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G26080.1	Bra033267.1-P	AT1G01360.1	19407143
AT4G26080.1	Bra033267.1-P	AT1G01360.1	19874541
AT4G26080.1	Bra033261.1-P	AT1G01480.1	19705149
AT4G26080.1	Bra024452.1-P	AT2G18960.1	19874541
AT4G26080.1	Bra038835.1-P	AT2G18960.1	19874541
AT4G26080.1	Bra036488.1-P	AT2G20580.1	19874541
AT4G26080.1	Bra021864.1-P	AT2G33610.1	19033529
AT4G26080.1	Bra000052.1-P	AT2G38310.1	19407142
AT4G26080.1	Bra000052.1-P	AT2G38310.1	19874541
AT4G26080.1	Bra000184.1-P	AT2G40330.1	19874541
AT4G26080.1	Bra004967.1-P	AT2G40330.1	19874541
AT4G26080.1	Bra017012.1-P	AT2G40330.1	19874541
AT4G26080.1	Bra022418.1-P	AT3G19390.1	19874541
AT4G26080.1	Bra038206.1-P	AT3G19390.1	19874541
AT4G26080.1	Bra038208.1-P	AT3G19390.1	19874541
AT4G26080.1	Bra039782.1-P	AT3G53430.1	19874541
AT4G26080.1	Bra039787.1-P	AT3G53430.1	19874541
AT4G26080.1	Bra000938.1-P	AT4G01026.1	19874541
AT4G26080.1	Bra035236.1-P	AT4G11280.1	19705149
AT4G26080.1	Bra012635.1-P	AT4G17870.1	19407142
AT4G26080.1	Bra013262.1-P	AT4G17870.1	19407142
AT4G26080.1	Bra021032.1-P	AT4G17870.1	19407142
AT4G26080.1	Bra012635.1-P	AT4G17870.1	19874541
AT4G26080.1	Bra013262.1-P	AT4G17870.1	19874541
AT4G26080.1	Bra021032.1-P	AT4G17870.1	19874541
AT4G26080.1	Bra026299.1-P	AT4G27920.1	19874541
AT4G26080.1	Bra011481.1-P	AT4G33950.1	16365038
AT4G26080.1	Bra017615.1-P	AT4G33950.1	16365038
AT4G26080.1	Bra011481.1-P	AT4G33950.1	19874541
AT4G26080.1	Bra017615.1-P	AT4G33950.1	19874541
AT4G26080.1	Bra010735.1-P	AT4G38630.1	19874541
AT4G26080.1	Bra033573.1-P	AT4G38630.1	19874541
AT4G26080.1	Bra005853.1-P	AT5G05440.1	19874541
AT4G26080.1	Bra009113.1-P	AT5G05440.1	19874541
AT4G26080.1	Bra028758.1-P	AT5G05440.1	19874541
AT4G26080.1	Bra002289.1-P	AT5G20280.1	19874541
AT4G26080.1	Bra020096.1-P	AT5G20280.1	19874541
AT4G26080.1	Bra017526.1-P	AT5G46790.1	19874541
AT4G26080.1	Bra024995.1-P	AT5G46790.1	19874541
AT4G26080.1	Bra003077.1-P	AT5G53160.2	19874541
AT4G26080.1	Bra022634.1-P	AT5G53160.2	19874541
AT4G26080.1	Bra029093.1-P	AT5G53160.2	19874541
AT4G26080.1	Bra012113.1-P	AT5G66880.1	19874541

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX89368	Canola	cytosol	99.53	99.3
CDX94382	Canola	cytosol	97.88	99.05
Bra019121.1-P	Field mustard	cytosol	88.71	91.28
Bra010441.1-P	Field mustard	cytosol	88.24	88.86
AT4G26080.1	Thale cress	cytosol, nucleus, plastid	87.06	85.25
Bra002766.1-P	Field mustard	cytosol	73.88	74.41
Bra016595.1-P	Field mustard	cytosol	47.29	49.02
Bra016034.1-P	Field mustard	cytosol, peroxisome, plastid	49.18	43.18
Bra002038.1-P	Field mustard	nucleus	36.71	41.05
KRH19237	Soybean	cytosol, nucleus, peroxisome	51.53	40.86
KRH37441	Soybean	cytosol	49.65	40.42
KRH12454	Soybean	cytosol	50.12	40.42
Bra025964.1-P	Field mustard	cytosol	48.24	40.35
KRH02667	Soybean	cytosol, nucleus, peroxisome	51.06	40.33
Bra018398.1-P	Field mustard	cytosol	34.35	39.89
PGSC0003DMT400046382	Potato	cytosol	49.41	38.6
Bra034845.1-P	Field mustard	nucleus	36.0	38.35
Solyc07g040990.2.1	Tomato	cytosol	47.29	37.5
Bra002594.1-P	Field mustard	plastid	35.76	36.89
Bra015579.1-P	Field mustard	nucleus	35.29	35.21
Bra031574.1-P	Field mustard	nucleus	34.82	33.95
Bra029160.1-P	Field mustard	cytosol	33.18	33.73
Bra030455.1-P	Field mustard	cytosol	11.76	31.45
Bra040446.1-P	Field mustard	plasma membrane, vacuole	23.29	9.35

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:11.1.2.1.1.2	MapMan:18.4.24.2.1	Gene3D:3.60.40.10	EnsemblPlantsGene:Bra013945
EnsemblPlants:Bra013945.1	EnsemblPlants:Bra013945.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0004721	GO:GO:0004722
GO:GO:0005488	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016787	GO:GO:0019538	GO:GO:0043169	GO:GO:0046872	InterPro:IPR001932	InterPro:IPR036457
UniProt:M4DBT5	PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom
ScanProsite:PS01032	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF373	SMART:SM00332	SUPFAM:SSF81606
UniParc:UPI0002546BEA	SEG:seg	:	:	:	:

Description

AT4G26080 (E=2e-182) ABI1 | ABI1 (ABA INSENSITIVE 1); calcium ion binding / protein serine/threonine phosphatase

Coordinates

chrA01:-:8637623..8639208

Molecular Weight (calculated)

46617.3 Da

IEP (calculated)

6.856

GRAVY (calculated)

-0.413

Length

425 amino acids

Sequence
(BLAST)

001: MEEVSPAVAM PFMPFPEQQM ELAGIMLGKG YCNGQYSSQD SENGSCSVSG SRKVLTSRIN SPNLNMKKEP SSSSSSSSSS SSSEIVVAGE EINGSDERSK
101: KMISRTESRS LFEFKSVPLY GVTSICGRRP EMEDAVSTIP RFLQSPTNSM LDGRFNPQTT AHFFGVYDGH GGSQVANYCR ERMHLALAEE IAKEKPMLCD
201: GDTWQEKWKK ALFNSFLRVD SEVESVAPET VGSTSVVAVV FPTHIFVANC GDSRAVLCRG KTALPLSTDH KPDREDEAAR IEAAGGKVIR WNGARVFGVL
301: AMSRSIGDRY LKPSIIPDPE VTAVRRVKED DCLILASDGV WDIMTDEEAC EMARKRILLW HKKNAVAGDA SLHTDERRGE GKDPAAMSAA EYLSKLALQR
401: GSKDNITVVV VDLKPQRKFK SKPLN

Best Arabidopsis Sequence Match ( AT4G26080.1 )
(BLAST)

001: MEEVSPAIAG PFRPFSETQM DFTGIRLGKG YCNNQYSNQD SENGDLMVSL PETSSCSVSG SHGSESRKVL ISRINSPNLN MKESAAADIV VVDISAGDEI
101: NGSDITSEKK MISRTESRSL FEFKSVPLYG FTSICGRRPE MEDAVSTIPR FLQSSSGSML DGRFDPQSAA HFFGVYDGHG GSQVANYCRE RMHLALAEEI
201: AKEKPMLCDG DTWLEKWKKA LFNSFLRVDS EIESVAPETV GSTSVVAVVF PSHIFVANCG DSRAVLCRGK TALPLSVDHK PDREDEAARI EAAGGKVIQW
301: NGARVFGVLA MSRSIGDRYL KPSIIPDPEV TAVKRVKEDD CLILASDGVW DVMTDEEACE MARKRILLWH KKNAVAGDAS LLADERRKEG KDPAAMSAAE
401: YLSKLAIQRG SKDNISVVVV DLKPRRKLKS KPLN

Arabidopsis Description

ABI1Protein phosphatase 2C 56 [Source:UniProtKB/Swiss-Prot;Acc:P49597]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.