Factsheet for Bra000938.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra016034.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G01026.1	Bra016034.1-P	AT1G72770.1	19407142

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX74368	Canola	cytosol	98.45	98.45
Bra033267.1-P	Field mustard	cytosol	77.72	80.65
AT4G01026.1	Thale cress	cytosol	87.56	80.09
VIT_02s0025g01340.t01	Wine grape	cytosol	71.5	74.59
Bra003077.1-P	Field mustard	cytosol	68.91	72.28
PGSC0003DMT400012888	Potato	cytosol	65.8	71.75
GSMUA_Achr10P...	Banana	cytosol	68.39	70.97
Solyc12g055990.1.1	Tomato	cytosol	66.32	70.72
PGSC0003DMT400031686	Potato	cytosol	68.91	70.37
Solyc08g082180.2.1	Tomato	cytosol	68.91	70.37
Bra003463.1-P	Field mustard	cytosol	67.88	70.05
GSMUA_Achr2P19970_001	Banana	cytosol	67.36	69.89
GSMUA_AchrUn_...	Banana	cytosol	66.84	69.35
Bra022634.1-P	Field mustard	cytosol	67.36	69.15
HORVU0Hr1G032390.2	Barley	cytosol, extracellular	30.57	68.6
GSMUA_Achr10P...	Banana	cytosol	65.8	68.28
Bra029093.1-P	Field mustard	cytosol	64.77	67.93
GSMUA_Achr3P03480_001	Banana	cytosol	68.39	64.08
Os02t0255500-01	Rice	cytosol	66.84	63.24
Zm00001d037719_P001	Maize	cytosol	64.25	62.94
TraesCS1B01G145800.1	Wheat	cytosol	66.84	62.93
TraesCS1D01G126900.1	Wheat	cytosol	66.84	62.93
TraesCS1A01G126800.1	Wheat	cytosol	66.84	62.93
Bra026299.1-P	Field mustard	cytosol	59.59	62.5
EES17886	Sorghum	cytosol	63.73	62.44
Zm00001d010445_P001	Maize	cytosol	63.21	61.93
Zm00001d016105_P001	Maize	cytosol	66.84	60.85
EES04864	Sorghum	cytosol	66.32	60.66
Os05t0213500-01	Rice	cytosol, nucleus	65.28	60.29
GSMUA_Achr8P19910_001	Banana	mitochondrion	64.77	59.81
Zm00001d053396_P001	Maize	cytosol	65.28	58.06
GSMUA_Achr2P15420_001	Banana	cytosol, mitochondrion, nucleus, plastid	67.36	57.02
Zm00001d002533_P001	Maize	cytosol	36.27	55.56
Os02t0255300-00	Rice	cytosol, plastid	50.78	54.44
TraesCS7B01G232100.1	Wheat	cytoskeleton, cytosol, nucleus	52.33	51.79
Os06t0528300-00	Rice	cytosol	54.92	51.46
Os06t0527800-01	Rice	cytosol	53.89	50.49
HORVU7Hr1G079270.1	Barley	cytosol	50.78	49.75
TraesCS7D01G328000.1	Wheat	cytosol	50.26	49.24
TraesCS7A01G350800.1	Wheat	cytosol	49.22	48.22
Bra028758.1-P	Field mustard	cytosol	40.41	47.27
Os06t0526400-00	Rice	cytosol	47.67	46.94
HORVU1Hr1G030390.2	Barley	extracellular, mitochondrion, plasma membrane	66.84	44.33
Bra025048.1-P	Field mustard	cytosol	37.82	42.94
Bra012635.1-P	Field mustard	cytosol	41.45	41.88
Bra017125.1-P	Field mustard	plastid	43.52	41.18
HORVU3Hr1G054230.1	Barley	mitochondrion	33.68	40.88
Bra000052.1-P	Field mustard	plastid	43.52	40.58
Bra013262.1-P	Field mustard	cytosol	39.9	40.31
Bra013334.1-P	Field mustard	cytosol	34.2	39.76
Bra017012.1-P	Field mustard	cytosol	41.45	39.02
Bra007772.1-P	Field mustard	cytosol	37.82	38.83
Bra009113.1-P	Field mustard	cytosol	40.93	38.73
Bra005115.1-P	Field mustard	plastid	29.53	38.26
Bra005853.1-P	Field mustard	cytosol	39.9	37.93
Bra000184.1-P	Field mustard	cytosol, mitochondrion	40.93	37.26
Bra024995.1-P	Field mustard	nucleus	40.41	37.14
Bra004967.1-P	Field mustard	mitochondrion	39.38	35.85
Bra021032.1-P	Field mustard	cytosol	29.02	35.67
Bra017526.1-P	Field mustard	nucleus	33.16	34.97
Bra008064.1-P	Field mustard	plastid	35.75	33.66
Os06t0526466-00	Rice	cytosol, mitochondrion	20.21	28.26

Protein Annotations

MapMan:11.1.2.1.1.1	Gene3D:3.30.530.20	EnsemblPlantsGene:Bra000938	EnsemblPlants:Bra000938.1	EnsemblPlants:Bra000938.1-P	GO:GO:0003674
GO:GO:0004864	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006464
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0019538	GO:GO:0030234	GO:GO:0032515
GO:GO:0043086	InterPro:IPR023393	UniProt:M4C9Q9	PFAM:PF10604	PANTHER:PTHR31213	PANTHER:PTHR31213:SF4
InterPro:Polyketide_cyclase/dehydratase	SUPFAM:SSF55961	InterPro:START-like_dom_sf	UniParc:UPI00025406F3	:	:

Description

AT4G01026 (E=3e-093) | unknown protein

Coordinates

chrA03:+:14039251..14039984

Molecular Weight (calculated)

21767.1 Da

IEP (calculated)

6.708

GRAVY (calculated)

-0.268

Length

193 amino acids

Sequence
(BLAST)

001: MEEIIVNDSE MYGALVTAQY ARLHHRHHCR ENQCTSVLVK YIKAPVHLVW SLVRRFDEPQ KYKPFVSRCT VQGHPEIGSL REVNVKSGLP ATTSTERLEQ
101: LDDNERILGI NIIGGDHRLK NYSSILTVHP EMIEGRAGTM VIESFVVDVP QGNTKDETCY FVESLIKCNL KSLACVSERL AAQDITNPTA PTF

Best Arabidopsis Sequence Match ( AT4G01026.1 )
(BLAST)

001: MEMIGGDDTD TEMYGALVTA QSLRLRHLHH CRENQCTSVL VKYIQAPVHL VWSLVRRFDQ PQKYKPFISR CTVNGDPEIG CLREVNVKSG LPATTSTERL
101: EQLDDEEHIL GINIIGGDHR LKNYSSILTV HPEMIDGRSG TMVMESFVVD VPQGNTKDDT CYFVESLIKC NLKSLACVSE RLAAQDITNS IATFCNASNG
201: YREKNHTETN L

Arabidopsis Description

PYL7RCAR2 [Source:UniProtKB/TrEMBL;Acc:A0A178UTD1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.