Factsheet for Bra017125.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 5
cytosol 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY18391	Canola	plastid	100.0	100.0
CDY54415	Canola	cytosol	99.51	99.51
Bra005115.1-P	Field mustard	plastid	66.67	91.28
Bra000052.1-P	Field mustard	plastid	92.16	90.82
KRH00319	Soybean	cytosol	61.76	71.19
KRH49452	Soybean	plastid	60.29	69.1
Bra028758.1-P	Field mustard	cytosol	53.43	66.06
TraesCS4A01G114400.1	Wheat	cytosol	55.39	63.13
Solyc10g085310.1.1	Tomato	plastid	65.2	62.44
Solyc09g015380.1.1	Tomato	plastid	61.27	62.19
PGSC0003DMT400028658	Potato	nucleus	64.71	61.97
Solyc10g076410.1.1	Tomato	plastid	59.8	60.1
VIT_13s0067g01940.t01	Wine grape	plastid	62.25	59.91
PGSC0003DMT400041080	Potato	mitochondrion	60.78	59.9
PGSC0003DMT400075056	Potato	plastid	62.25	59.35
KRH76014	Soybean	cytosol	62.75	59.26
VIT_08s0058g00470.t01	Wine grape	plastid	65.69	59.03
TraesCS1B01G306800.1	Wheat	mitochondrion	55.88	58.76
TraesCS1A01G297600.1	Wheat	mitochondrion	56.86	57.71
TraesCS1D01G293600.1	Wheat	mitochondrion, plastid	56.37	57.21
Zm00001d038436_P001	Maize	plastid	55.88	57.0
HORVU1Hr1G070420.1	Barley	mitochondrion	55.88	56.72
GSMUA_Achr9P04600_001	Banana	cytosol	39.71	56.64
Bra009113.1-P	Field mustard	cytosol	56.37	56.37
GSMUA_Achr6P32790_001	Banana	cytosol	57.84	55.92
TraesCS3A01G348400.1	Wheat	plastid	56.37	55.83
HORVU3Hr1G088100.1	Barley	plastid	56.37	55.83
TraesCS3D01G342000.1	Wheat	plastid	56.37	55.83
HORVU3Hr1G039010.1	Barley	plastid	56.37	55.83
TraesCS3B01G380300.1	Wheat	mitochondrion, plastid	56.37	55.56
Bra005853.1-P	Field mustard	cytosol	54.9	55.17
Bra017012.1-P	Field mustard	cytosol	55.39	55.12
TraesCS2D01G087500.1	Wheat	plastid	56.86	54.21
TraesCS2B01G105300.1	Wheat	plastid	57.35	53.92
Os05t0473000-01	Rice	cytosol	57.35	53.92
Bra004967.1-P	Field mustard	mitochondrion	55.88	53.77
EES19683	Sorghum	plastid	56.86	53.7
Zm00001d047705_P001	Maize	plastid	56.86	53.21
EER92405	Sorghum	plastid	57.84	53.15
Bra025048.1-P	Field mustard	cytosol	44.12	52.94
TraesCS4D01G191200.1	Wheat	cytosol	57.84	52.68
TraesCS4B01G189800.1	Wheat	cytosol	57.84	52.68
HORVU4Hr1G055220.1	Barley	cytosol	57.35	52.23
Zm00001d028793_P001	Maize	cytosol, mitochondrion, plastid	55.88	51.82
Os03t0297600-01	Rice	cytosol	57.84	51.53
GSMUA_AchrUn_...	Banana	plastid	39.71	51.27
GSMUA_Achr9P17980_001	Banana	cytosol	37.25	51.01
Bra000184.1-P	Field mustard	cytosol, mitochondrion	52.94	50.94
Zm00001d043014_P001	Maize	cytosol	52.45	50.23
Bra013334.1-P	Field mustard	cytosol	40.69	50.0
Bra012635.1-P	Field mustard	cytosol	46.57	49.74
GSMUA_Achr5P29490_001	Banana	plastid	39.22	49.38
GSMUA_Achr11P...	Banana	cytosol, plastid	37.25	48.1
Bra007772.1-P	Field mustard	cytosol	43.63	47.34
Bra033267.1-P	Field mustard	cytosol	43.14	47.31
Bra013262.1-P	Field mustard	cytosol	44.12	47.12
GSMUA_Achr8P21220_001	Banana	cytosol	39.22	47.06
Bra003077.1-P	Field mustard	cytosol	41.67	46.2
Bra029093.1-P	Field mustard	cytosol	41.18	45.65
Bra026299.1-P	Field mustard	cytosol	41.18	45.65
Bra003463.1-P	Field mustard	cytosol	40.69	44.38
Bra024995.1-P	Field mustard	nucleus	45.59	44.29
Bra022634.1-P	Field mustard	cytosol	40.69	44.15
Os01t0827800-00	Rice	plastid	55.39	44.14
Bra000938.1-P	Field mustard	cytosol	41.18	43.52
GSMUA_Achr10P...	Banana	cytosol, plastid	42.16	43.43
Bra021032.1-P	Field mustard	cytosol	33.33	43.31
TraesCS2A01G089400.1	Wheat	plastid	56.86	40.56
Bra017526.1-P	Field mustard	nucleus	36.27	40.44
Bra008064.1-P	Field mustard	plastid	40.2	40.0
OQU87775	Sorghum	endoplasmic reticulum, extracellular	50.0	37.5
Zm00001d012475_P001	Maize	cytosol	51.96	33.97

Protein Annotations

EnsemblPlants:Bra017125.1	EnsemblPlants:Bra017125.1-P	EnsemblPlantsGene:Bra017125	Gene3D:3.30.530.20	InterPro:IPR023393	InterPro:Polyketide_cyclase/dehydratase
InterPro:START-like_dom_sf	PANTHER:PTHR31213	PANTHER:PTHR31213:SF48	PFAM:PF10604	SEG:seg	SUPFAM:SSF55961
UniParc:UPI000254480F	UniProt:M4DKU4	MapMan:11.1.2.1.1.1	:	:	:

Description

AT2G38310 (E=2e-096) | unknown protein

Coordinates

chrA04:+:16483050..16483664

Molecular Weight (calculated)

21990.0 Da

IEP (calculated)

6.710

GRAVY (calculated)

-0.113

Length

204 amino acids

Sequence
(BLAST)

001: MLAVHRPSSA VSDGDTVQIP TMVQKRFPSL SRDATAARFH THEVGPNQCC SAVIQEISAP ISTVWSVVRR FDNPQAYKHF LKSCSVIDGD GGNVGSLRQV
101: HVVSGLPAAS STERLDILDD ERHVISFSVV GGDHRLSNYR SVTTLHSSPV SGTVVVESYV VDVPPGNTKE ETCDFVDVIV RCNLQSLAKI AEISAAEGNK
201: KTSM

Best Arabidopsis Sequence Match ( AT2G38310.1 )
(BLAST)

001: MLAVHRPSSA VSDGDSVQIP MMIASFQKRF PSLSRDSTAA RFHTHEVGPN QCCSAVIQEI SAPISTVWSV VRRFDNPQAY KHFLKSCSVI GGDGDNVGSL
101: RQVHVVSGLP AASSTERLDI LDDERHVISF SVVGGDHRLS NYRSVTTLHP SPISGTVVVE SYVVDVPPGN TKEETCDFVD VIVRCNLQSL AKIAENTAAE
201: SKKKMSL

Arabidopsis Description

PYL4Abscisic acid receptor PYL4 [Source:UniProtKB/Swiss-Prot;Acc:O80920]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.