Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G306800.1 | Wheat | mitochondrion | 94.53 | 97.94 |
| HORVU1Hr1G070420.1 | Barley | mitochondrion | 97.51 | 97.51 |
| TraesCS1D01G293600.1 | Wheat | mitochondrion, plastid | 97.51 | 97.51 |
| Zm00001d038436_P001 | Maize | plastid | 84.08 | 84.5 |
| Os05t0473000-01 | Rice | cytosol | 87.56 | 81.11 |
| EES19683 | Sorghum | plastid | 86.57 | 80.56 |
| TraesCS3A01G348400.1 | Wheat | plastid | 80.1 | 78.16 |
| TraesCS4A01G114400.1 | Wheat | cytosol | 61.19 | 68.72 |
| Zm00001d043014_P001 | Maize | cytosol | 69.65 | 65.73 |
| Bra028758.1-P | Field mustard | cytosol | 53.23 | 64.85 |
| KRH00319 | Soybean | cytosol | 55.22 | 62.71 |
| KRH49452 | Soybean | plastid | 54.73 | 61.8 |
| GSMUA_Achr11P... | Banana | cytosol, plastid | 47.76 | 60.76 |
| GSMUA_Achr5P29490_001 | Banana | plastid | 46.77 | 58.02 |
| CDY54415 | Canola | cytosol | 57.71 | 56.86 |
| Bra017125.1-P | Field mustard | plastid | 57.71 | 56.86 |
| CDY18391 | Canola | plastid | 57.71 | 56.86 |
| KRH73249 | Soybean | plastid | 58.71 | 56.73 |
| Solyc05g052420.1.1 | Tomato | cytosol | 22.89 | 56.1 |
| Solyc03g095780.1.1 | Tomato | plastid | 55.72 | 55.72 |
| Bra005115.1-P | Field mustard | plastid | 41.29 | 55.7 |
| CDY07739 | Canola | plastid | 57.21 | 55.56 |
| CDX91449 | Canola | plastid | 57.21 | 55.56 |
| Bra000052.1-P | Field mustard | plastid | 57.21 | 55.56 |
| AT2G38310.1 | Thale cress | plastid | 57.21 | 55.56 |
| Solyc10g085310.1.1 | Tomato | plastid | 58.71 | 55.4 |
| CDY04951 | Canola | cytosol | 54.23 | 55.33 |
| CDY54453 | Canola | plastid | 57.21 | 55.29 |
| PGSC0003DMT400053120 | Potato | cytosol, plastid | 55.22 | 55.22 |
| PGSC0003DMT400053119 | Potato | cytosol, plastid | 55.22 | 55.22 |
| PGSC0003DMT400053102 | Potato | cytosol, plastid | 55.22 | 55.22 |
| CDY14471 | Canola | plastid | 56.72 | 55.07 |
| AT5G05440.1 | Thale cress | cytosol | 55.22 | 54.68 |
| PGSC0003DMT400028658 | Potato | nucleus | 57.71 | 54.46 |
| CDX98844 | Canola | cytosol | 55.22 | 54.41 |
| CDX93191 | Canola | cytosol | 54.73 | 54.19 |
| KRH76014 | Soybean | cytosol | 58.21 | 54.17 |
| Bra009113.1-P | Field mustard | cytosol | 54.73 | 53.92 |
| CDX70150 | Canola | cytosol | 54.73 | 53.92 |
| CDY52923 | Canola | cytosol | 54.73 | 53.66 |
| Bra017012.1-P | Field mustard | cytosol | 54.73 | 53.66 |
| PGSC0003DMT400061535 | Potato | plastid | 57.71 | 53.21 |
| Solyc10g076410.1.1 | Tomato | plastid | 53.73 | 53.2 |
| VIT_13s0067g01940.t01 | Wine grape | plastid | 55.72 | 52.83 |
| KRH14908 | Soybean | plastid | 57.21 | 52.75 |
| Solyc09g015380.1.1 | Tomato | plastid | 52.74 | 52.74 |
| CDX80959 | Canola | cytosol | 52.74 | 52.22 |
| VIT_08s0058g00470.t01 | Wine grape | plastid | 58.71 | 51.98 |
| CDX74796 | Canola | cytosol, nucleus, plastid | 54.73 | 51.89 |
| Bra005853.1-P | Field mustard | cytosol | 52.24 | 51.72 |
| CDY72318 | Canola | cytosol | 52.24 | 51.72 |
| PGSC0003DMT400041080 | Potato | mitochondrion | 53.23 | 51.69 |
| CDY18867 | Canola | cytosol, mitochondrion, nucleus, plastid | 54.23 | 51.42 |
| AT2G40330.1 | Thale cress | cytosol | 54.73 | 51.16 |
| PGSC0003DMT400069734 | Potato | mitochondrion, plastid | 52.74 | 50.96 |
| Bra004967.1-P | Field mustard | mitochondrion | 53.73 | 50.94 |
| PGSC0003DMT400075056 | Potato | plastid | 54.23 | 50.93 |
| CDY24911 | Canola | cytosol, mitochondrion | 53.73 | 50.7 |
| CDY07608 | Canola | cytosol, mitochondrion | 53.23 | 50.47 |
| Bra000184.1-P | Field mustard | cytosol, mitochondrion | 53.23 | 50.47 |
| TraesCS3A01G154400.1 | Wheat | cytosol | 49.25 | 50.25 |
| TraesCS7A01G358200.1 | Wheat | cytosol | 48.76 | 50.0 |
| OQU87775 | Sorghum | endoplasmic reticulum, extracellular | 66.67 | 49.26 |
| TraesCS2A01G089400.1 | Wheat | plastid | 66.17 | 46.5 |
| TraesCS1A01G191700.1 | Wheat | cytosol | 48.76 | 46.45 |
| Zm00001d012475_P001 | Maize | cytosol | 69.15 | 44.55 |
| KRH31193 | Soybean | cytosol, golgi, plastid | 56.22 | 43.97 |
| Solyc06g050500.2.1 | Tomato | plastid | 59.7 | 43.64 |
| TraesCS1A01G126800.1 | Wheat | cytosol | 42.79 | 41.95 |
| TraesCS7A01G350800.1 | Wheat | cytosol | 34.83 | 35.53 |
Protein Annotations
| EnsemblPlants:TraesCS1A01G297600.1 | EnsemblPlantsGene:TraesCS1A01G297600 | Gene3D:3.30.530.20 | InterPro:IPR023393 | InterPro:Polyketide_cyclase/dehydratase | InterPro:START-like_dom_sf |
| PANTHER:PTHR31213 | PANTHER:PTHR31213:SF21 | PFAM:PF10604 | SEG:seg | SUPFAM:SSF55961 | TIGR:cd07821 |
| MapMan:11.1.2.1.1.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr1A:-:492652278..492652883
Molecular Weight (calculated)
21165.0 Da
IEP (calculated)
8.766
GRAVY (calculated)
-0.070
Length
201 amino acids
Sequence
(BLAST)
(BLAST)
001: MPYTASRPSA PQRARVAAGG GGWKAAAHAA SCGAVPGEVA RHHEHAAGAG QCCSAVVQAI EAPVGAVWAV VRRFDRPQAY KHFIRSCRVV DGDGGAVGSV
101: REVRVVSGLP ATSSRERLEI LDDERRVLSF RVVGGEHRLS NYRSVTTVHE AASAGAVVVE SYVVDVPPGN TADETRTFVD TIVRCNLQSL ARTAQQLALA
201: A
101: REVRVVSGLP ATSSRERLEI LDDERRVLSF RVVGGEHRLS NYRSVTTVHE AASAGAVVVE SYVVDVPPGN TADETRTFVD TIVRCNLQSL ARTAQQLALA
201: A
001: MRSPVQLQHG SDATNGFHTL QPHDQTDGPI KRVCLTRGMH VPEHVAMHHT HDVGPDQCCS SVVQMIHAPP ESVWALVRRF DNPKVYKNFI RQCRIVQGDG
101: LHVGDLREVM VVSGLPAVSS TERLEILDEE RHVISFSVVG GDHRLKNYRS VTTLHASDDE GTVVVESYIV DVPPGNTEEE TLSFVDTIVR CNLQSLARST
201: NRQ
101: LHVGDLREVM VVSGLPAVSS TERLEILDEE RHVISFSVVG GDHRLKNYRS VTTLHASDDE GTVVVESYIV DVPPGNTEEE TLSFVDTIVR CNLQSLARST
201: NRQ
Arabidopsis Description
PYL5Abscisic acid receptor PYL5 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLB1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.