Factsheet for Solyc03g095780.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc03g061590.2.1
Solyc08g062650.2.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G40330.1	Solyc08g062650.2.1	AT1G72770.1	19407142
AT2G40330.1	Solyc08g062650.2.1	AT1G72770.1	19624469
AT2G40330.1	Solyc03g061590.2.1	AT2G20000.1	17944809

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400053102	Potato	cytosol, plastid	95.02	95.02
PGSC0003DMT400053119	Potato	cytosol, plastid	95.02	95.02
PGSC0003DMT400053120	Potato	cytosol, plastid	95.02	95.02
Solyc09g015380.1.1	Tomato	plastid	65.17	65.17
Solyc10g085310.1.1	Tomato	plastid	68.66	64.79
Solyc05g052420.1.1	Tomato	cytosol	26.37	64.63
Solyc10g076410.1.1	Tomato	plastid	63.68	63.05
KRH73249	Soybean	plastid	64.68	62.5
TraesCS4A01G114400.1	Wheat	cytosol	54.23	60.89
KRH14908	Soybean	plastid	64.68	59.63
GSMUA_Achr9P04600_001	Banana	cytosol	41.29	58.04
GSMUA_Achr6P32790_001	Banana	cytosol	60.2	57.35
Solyc06g050500.2.1	Tomato	plastid	78.11	57.09
TraesCS1B01G306800.1	Wheat	mitochondrion	54.73	56.7
CDX93191	Canola	cytosol	57.21	56.65
Zm00001d038436_P001	Maize	plastid	56.22	56.5
Solyc08g065410.1.1	Tomato	cytosol	40.8	56.16
Bra017012.1-P	Field mustard	cytosol	57.21	56.1
CDY52923	Canola	cytosol	57.21	56.1
TraesCS1D01G293600.1	Wheat	mitochondrion, plastid	55.72	55.72
TraesCS1A01G297600.1	Wheat	mitochondrion	55.72	55.72
Bra004967.1-P	Field mustard	mitochondrion	57.71	54.72
CDX74796	Canola	cytosol, nucleus, plastid	57.71	54.72
AT2G40330.1	Thale cress	cytosol	58.21	54.42
HORVU3Hr1G088100.1	Barley	plastid	55.72	54.37
HORVU3Hr1G039010.1	Barley	plastid	55.72	54.37
HORVU1Hr1G070420.1	Barley	mitochondrion	54.23	54.23
TraesCS3B01G380300.1	Wheat	mitochondrion, plastid	55.72	54.11
TraesCS3A01G348400.1	Wheat	plastid	55.22	53.88
TraesCS3D01G342000.1	Wheat	plastid	55.22	53.88
TraesCS2D01G087500.1	Wheat	plastid	56.72	53.27
EES19683	Sorghum	plastid	57.21	53.24
GSMUA_Achr9P17980_001	Banana	cytosol	39.3	53.02
TraesCS2B01G105300.1	Wheat	plastid	57.21	53.0
CDY18867	Canola	cytosol, mitochondrion, nucleus, plastid	55.72	52.83
Os05t0473000-01	Rice	cytosol	56.72	52.53
Bra000184.1-P	Field mustard	cytosol, mitochondrion	55.22	52.36
CDY07608	Canola	cytosol, mitochondrion	55.22	52.36
GSMUA_AchrUn_...	Banana	plastid	40.8	51.9
Zm00001d047705_P001	Maize	plastid	55.72	51.38
GSMUA_Achr11P...	Banana	cytosol, plastid	40.3	51.27
CDY24911	Canola	cytosol, mitochondrion	54.23	51.17
TraesCS4D01G191200.1	Wheat	cytosol	56.72	50.89
TraesCS4B01G189800.1	Wheat	cytosol	56.72	50.89
Zm00001d043014_P001	Maize	cytosol	53.73	50.7
Zm00001d028793_P001	Maize	cytosol, mitochondrion, plastid	55.22	50.45
EER92405	Sorghum	plastid	55.72	50.45
HORVU4Hr1G055220.1	Barley	cytosol	56.22	50.45
GSMUA_Achr5P29490_001	Banana	plastid	40.3	50.0
Solyc03g007310.2.1	Tomato	cytosol	45.77	49.73
Solyc12g055990.1.1	Tomato	cytosol	44.78	49.72
KRH31193	Soybean	cytosol, golgi, plastid	63.18	49.42
Os03t0297600-01	Rice	cytosol	56.22	49.34
Solyc01g095700.2.1	Tomato	cytosol	45.27	48.92
Solyc08g082180.2.1	Tomato	cytosol	45.77	48.68
GSMUA_Achr8P21220_001	Banana	cytosol	40.3	47.65
Solyc12g095970.1.1	Tomato	cytosol	44.78	47.37
Os01t0827800-00	Rice	plastid	56.22	44.14
GSMUA_Achr10P...	Banana	cytosol, plastid	42.29	42.93
Solyc06g061180.1.1	Tomato	nucleus	44.78	42.25
Solyc08g076960.1.1	Tomato	extracellular	46.77	40.69
TraesCS2A01G089400.1	Wheat	plastid	57.21	40.21
Solyc02g076770.1.1	Tomato	cytosol	42.79	39.45
OQU87775	Sorghum	endoplasmic reticulum, extracellular	51.24	37.87
Zm00001d012475_P001	Maize	cytosol	54.73	35.26

Protein Annotations

EnsemblPlants:Solyc03g095780.1.1	EnsemblPlantsGene:Solyc03g095780.1	Gene3D:3.30.530.20	InterPro:IPR023393	InterPro:Polyketide_cyclase/dehydratase	InterPro:START-like_dom_sf
PANTHER:PTHR31213	PANTHER:PTHR31213:SF48	PFAM:PF10604	SUPFAM:SSF55961	UniParc:UPI0002767A16	UniProt:K4BJ00
MapMan:11.1.2.1.1.1	:	:	:	:	:

Description

No Description!

Coordinates

chr3:+:57036617..57037222

Molecular Weight (calculated)

22045.2 Da

IEP (calculated)

6.893

GRAVY (calculated)

-0.120

Length

201 amino acids

Sequence
(BLAST)

001: MPCSVQLQRI NPTTTTTLAG NFHKPPQPTC IIPVQFSVPN NHLHYHTHAV SPNQCCSAVV QTISAPIHAV WSLVRRFDNP QAYKHFLKSC HVIVGDGNVG
101: TLREVQVISG LPAASSTERL EILDDKEHVI SFSVVGGDHR LNNYRSVTTL HPADDENGTV VVESYVVDIP TGNTKEETCV FVDTIVRCNL QSLAQIATAN
201: R

Best Arabidopsis Sequence Match ( AT2G38310.1 )
(BLAST)

001: MLAVHRPSSA VSDGDSVQIP MMIASFQKRF PSLSRDSTAA RFHTHEVGPN QCCSAVIQEI SAPISTVWSV VRRFDNPQAY KHFLKSCSVI GGDGDNVGSL
101: RQVHVVSGLP AASSTERLDI LDDERHVISF SVVGGDHRLS NYRSVTTLHP SPISGTVVVE SYVVDVPPGN TKEETCDFVD VIVRCNLQSL AKIAENTAAE
201: SKKKMSL

Arabidopsis Description

PYL4Abscisic acid receptor PYL4 [Source:UniProtKB/Swiss-Prot;Acc:O80920]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.