CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH41728

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G40330.1	KRH41728	AT2G20000.1	17944809

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH73249	Soybean	plastid	87.61	91.83
KRH00319	Soybean	cytosol	53.67	66.1
Solyc05g052420.1.1	Tomato	cytosol	24.77	65.85
KRH49452	Soybean	plastid	53.67	65.73
Solyc03g095780.1.1	Tomato	plastid	59.63	64.68
PGSC0003DMT400053102	Potato	cytosol, plastid	58.26	63.18
PGSC0003DMT400053119	Potato	cytosol, plastid	58.26	63.18
PGSC0003DMT400053120	Potato	cytosol, plastid	58.26	63.18
TraesCS4A01G114400.1	Wheat	cytosol	50.46	61.45
Zm00001d038436_P001	Maize	plastid	55.96	61.0
PGSC0003DMT400061535	Potato	plastid	60.55	60.55
KRH31193	Soybean	cytosol, golgi, plastid	70.18	59.53
GSMUA_Achr9P04600_001	Banana	cytosol	38.99	59.44
KRH76014	Soybean	cytosol	58.26	58.8
TraesCS1B01G306800.1	Wheat	mitochondrion	52.29	58.76
EES19683	Sorghum	plastid	57.34	57.87
CDX93191	Canola	cytosol	53.67	57.64
TraesCS1A01G297600.1	Wheat	mitochondrion	52.75	57.21
TraesCS1D01G293600.1	Wheat	mitochondrion, plastid	52.75	57.21
GSMUA_Achr6P32790_001	Banana	cytosol	55.05	56.87
HORVU1Hr1G070420.1	Barley	mitochondrion	52.29	56.72
CDY52923	Canola	cytosol	53.21	56.59
Bra017012.1-P	Field mustard	cytosol	53.21	56.59
PGSC0003DMT400069734	Potato	mitochondrion, plastid	53.67	56.25
TraesCS3B01G380300.1	Wheat	mitochondrion, plastid	53.21	56.04
HORVU3Hr1G039010.1	Barley	plastid	52.75	55.83
TraesCS3A01G348400.1	Wheat	plastid	52.75	55.83
HORVU3Hr1G088100.1	Barley	plastid	52.75	55.83
TraesCS3D01G342000.1	Wheat	plastid	52.75	55.83
AT2G40330.1	Thale cress	cytosol	54.13	54.88
CDX74796	Canola	cytosol, nucleus, plastid	53.21	54.72
GSMUA_AchrUn_...	Banana	plastid	39.45	54.43
Bra004967.1-P	Field mustard	mitochondrion	52.29	53.77
TraesCS2D01G087500.1	Wheat	plastid	52.75	53.74
TraesCS2B01G105300.1	Wheat	plastid	53.21	53.46
Os05t0473000-01	Rice	cytosol	53.21	53.46
GSMUA_Achr11P...	Banana	cytosol, plastid	38.07	52.53
CDY18867	Canola	cytosol, mitochondrion, nucleus, plastid	50.92	52.36
GSMUA_Achr9P17980_001	Banana	cytosol	35.78	52.35
Zm00001d047705_P001	Maize	plastid	52.29	52.29
EER92405	Sorghum	plastid	53.21	52.25
Bra000184.1-P	Field mustard	cytosol, mitochondrion	50.46	51.89
CDY07608	Canola	cytosol, mitochondrion	50.46	51.89
TraesCS4D01G191200.1	Wheat	cytosol	53.21	51.79
TraesCS4B01G189800.1	Wheat	cytosol	53.21	51.79
HORVU4Hr1G055220.1	Barley	cytosol	52.75	51.34
CDY24911	Canola	cytosol, mitochondrion	50.0	51.17
Zm00001d028793_P001	Maize	cytosol, mitochondrion, plastid	51.38	50.91
Zm00001d043014_P001	Maize	cytosol	49.54	50.7
GSMUA_Achr5P29490_001	Banana	plastid	37.61	50.62
Os03t0297600-01	Rice	cytosol	52.75	50.22
GSMUA_Achr8P21220_001	Banana	cytosol	38.53	49.41
KRH52194	Soybean	cytosol	42.2	49.2
Solyc06g050500.2.1	Tomato	plastid	61.47	48.73
KRH61500	Soybean	cytosol	42.2	48.68
KRH47929	Soybean	cytosol	40.83	48.11
KRH05492	Soybean	cytosol	40.83	47.34
KRH53449	Soybean	cytosol	41.28	47.12
KRH11022	Soybean	cytosol	39.91	47.03
KRH18155	Soybean	cytosol	40.83	46.6
KRH65286	Soybean	cytosol	19.27	46.15
KRH45453	Soybean	cytosol	44.5	45.75
KRH65845	Soybean	cytosol	40.37	45.6
KRH21267	Soybean	cytosol	38.53	45.41
KRH75621	Soybean	cytosol	44.5	45.33
GSMUA_Achr10P...	Banana	cytosol, plastid	40.83	44.95
Os01t0827800-00	Rice	plastid	50.92	43.36
KRH74424	Soybean	cytosol	43.58	42.99
KRH15519	Soybean	cytosol	41.28	42.86
KRH16733	Soybean	cytosol	20.18	41.9
KRH06494	Soybean	cytosol, extracellular, vacuole	35.78	40.84
TraesCS2A01G089400.1	Wheat	plastid	52.75	40.21
OQU87775	Sorghum	endoplasmic reticulum, extracellular	47.71	38.24
KRH39536	Soybean	plastid	44.04	36.09
Zm00001d012475_P001	Maize	cytosol	50.46	35.26

Protein Annotations

EntrezGene:100804400	MapMan:11.1.2.1.1.1	Gene3D:3.30.530.20	EMBL:ACUP02008541	EnsemblPlantsGene:GLYMA_14G056300	GO:GO:0003674
GO:GO:0003824	GO:GO:0004601	GO:GO:0005488	GO:GO:0006950	GO:GO:0006979	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0020037	GO:GO:0055114	GO:GO:0098869	InterPro:Haem_peroxidase
InterPro:Haem_peroxidase_pln/fun/bac	InterPro:IPR002016	InterPro:IPR023393	UniProt:K7M543	EnsemblPlants:KRH14908	ProteinID:KRH14908
ProteinID:KRH14908.1	PFAM:PF00141	PFAM:PF10604	PANTHER:PTHR31213	PANTHER:PTHR31213:SF3	InterPro:Polyketide_cyclase/dehydratase
SUPFAM:SSF48113	SUPFAM:SSF55961	InterPro:START-like_dom_sf	UniParc:UPI000233B546	SEG:seg	:

Description

hypothetical protein

Coordinates

chr14:+:4486582..4487905

Molecular Weight (calculated)

23183.7 Da

IEP (calculated)

7.557

GRAVY (calculated)

-0.007

Length

218 amino acids

Sequence
(BLAST)

001: MTCPLQLHRF SPATDTSTAI ANGVNCPKPA QTAPSTRRLL AKVGLSVTEM VARHHAHAVG PNQCCSFVIQ AIDAPVSAVW PVVRRFDNPQ AYKHFVKSCH
101: VVAAGGAGGD GGIHVGALRE VRVVSGLPAV SSTERLEILD DERHVMSFSV VGGDHRLRNY RSVTTLHGDG SNGGTVVIES YVVDIPAGNT KEETCVFVDT
201: IVRCNLQSLA QMAENMGS

Best Arabidopsis Sequence Match ( AT5G05440.1 )
(BLAST)

001: MRSPVQLQHG SDATNGFHTL QPHDQTDGPI KRVCLTRGMH VPEHVAMHHT HDVGPDQCCS SVVQMIHAPP ESVWALVRRF DNPKVYKNFI RQCRIVQGDG
101: LHVGDLREVM VVSGLPAVSS TERLEILDEE RHVISFSVVG GDHRLKNYRS VTTLHASDDE GTVVVESYIV DVPPGNTEEE TLSFVDTIVR CNLQSLARST
201: NRQ

Arabidopsis Description

PYL5Abscisic acid receptor PYL5 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLB1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.