CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 3
plastid 4
extracellular 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH74424	Soybean	cytosol	77.82	93.67
KRH75621	Soybean	cytosol	57.52	71.5
KRH45453	Soybean	cytosol	56.77	71.23
GSMUA_Achr4P19170_001	Banana	cytosol	44.74	61.34
Zm00001d047037_P001	Maize	cytosol	46.62	60.49
TraesCS1A01G191700.1	Wheat	cytosol	46.62	58.77
GSMUA_Achr8P14780_001	Banana	cytosol	45.11	58.25
TraesCS1D01G195300.1	Wheat	cytosol	46.62	58.22
TraesCS1B01G206600.1	Wheat	cytosol, unclear	46.62	58.22
Zm00001d030045_P001	Maize	cytosol	46.24	58.02
OQU92088	Sorghum	cytosol	46.24	58.02
Os10t0573400-01	Rice	plasma membrane	45.86	57.55
KRH00319	Soybean	cytosol	37.59	56.5
KRH49452	Soybean	plastid	36.47	54.49
KRH52194	Soybean	cytosol	37.59	53.48
KRH61500	Soybean	cytosol	37.97	53.44
KRH05492	Soybean	cytosol	36.47	51.6
KRH15519	Soybean	cytosol	39.1	49.52
HORVU1Hr1G050110.1	Barley	plastid	49.25	47.81
KRH73249	Soybean	plastid	36.84	47.12
KRH76014	Soybean	cytosol	37.22	45.83
KRH47929	Soybean	cytosol	30.83	44.32
KRH14908	Soybean	plastid	36.09	44.04
KRH65845	Soybean	cytosol	30.83	42.49
KRH18155	Soybean	cytosol	30.45	42.41
KRH11022	Soybean	cytosol	29.32	42.16
KRH53449	Soybean	cytosol	30.08	41.88
KRH21267	Soybean	cytosol	28.57	41.08
KRH16733	Soybean	cytosol	15.79	40.0
KRH65286	Soybean	cytosol	13.53	39.56
KRH06494	Soybean	cytosol, extracellular, vacuole	27.82	38.74
KRH31193	Soybean	cytosol, golgi, plastid	36.09	37.35

Protein Annotations

EMBL:ACUP02005942	EnsemblPlants:KRH39536	EnsemblPlantsGene:GLYMA_09G204100	EntrezGene:100788576	Gene3D:3.30.530.20	InterPro:IPR023393
InterPro:Polyketide_cyclase/dehydratase	InterPro:START-like_dom_sf	PANTHER:PTHR31213	PANTHER:PTHR31213:SF6	PFAM:PF10604	ProteinID:KRH39536
ProteinID:KRH39536.1	SEG:seg	SUPFAM:SSF55961	UniParc:UPI0002957C54	UniProt:K7LF21	MapMan:11.1.2.1.1.1

Description

hypothetical protein

Coordinates

chr9:+:42833435..42834755

Molecular Weight (calculated)

29106.9 Da

IEP (calculated)

6.452

GRAVY (calculated)

-0.440

Length

266 amino acids

Sequence
(BLAST)

001: MFREEFPRIP PHVPQNLVSK APIASPTHTL SPSPSSLAFS LPAMEKAESS ASTSEPDSDD NHHRHPTNHH LNPPSGLTPL EFASLVPSVA EHHSYLVGPG
101: QCSSLLAQRV HAPPDAVWSF VRRFDKPQTY KHFIKSCAVK EPFHMAVGVT RDVNVISGLP AATSTERLDF LDDVRRVTGF SIIGGEHRLR NYRSVTTVHS
201: FDDDNASADG KIYTVVLESY VVDVPDGNTE EDTRLFADTV VKLNLQKLAS VTEGTNGDGD GKPHSR

Best Arabidopsis Sequence Match ( AT5G46790.1 )
(BLAST)

001: MANSESSSSP VNEEENSQRI STLHHQTMPS DLTQDEFTQL SQSIAEFHTY QLGNGRCSSL LAQRIHAPPE TVWSVVRRFD RPQIYKHFIK SCNVSEDFEM
101: RVGCTRDVNV ISGLPANTSR ERLDLLDDDR RVTGFSITGG EHRLRNYKSV TTVHRFEKEE EEERIWTVVL ESYVVDVPEG NSEEDTRLFA DTVIRLNLQK
201: LASITEAMNR NNNNNNSSQV R

Arabidopsis Description

PYL1Abscisic acid receptor PYL1 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZS8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.