Subcellular Localization
min:
: max
Winner_takes_all: golgi, plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| KRH41728 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G40330.1 | KRH41728 | AT2G20000.1 | 17944809 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH73249 | Soybean | plastid | 61.48 | 75.96 |
| KRH14908 | Soybean | plastid | 59.53 | 70.18 |
| KRH00319 | Soybean | cytosol | 47.08 | 68.36 |
| KRH49452 | Soybean | plastid | 46.3 | 66.85 |
| Solyc05g052420.1.1 | Tomato | cytosol | 20.62 | 64.63 |
| Solyc03g095780.1.1 | Tomato | plastid | 49.42 | 63.18 |
| PGSC0003DMT400061535 | Potato | plastid | 53.31 | 62.84 |
| PGSC0003DMT400053102 | Potato | cytosol, plastid | 48.25 | 61.69 |
| PGSC0003DMT400053119 | Potato | cytosol, plastid | 48.25 | 61.69 |
| PGSC0003DMT400053120 | Potato | cytosol, plastid | 48.25 | 61.69 |
| KRH76014 | Soybean | cytosol | 49.81 | 59.26 |
| TraesCS4A01G114400.1 | Wheat | cytosol | 40.86 | 58.66 |
| Zm00001d038436_P001 | Maize | plastid | 45.14 | 58.0 |
| TraesCS1B01G306800.1 | Wheat | mitochondrion | 43.58 | 57.73 |
| GSMUA_Achr9P04600_001 | Banana | cytosol | 31.91 | 57.34 |
| CDX93191 | Canola | cytosol | 44.75 | 56.65 |
| PGSC0003DMT400069734 | Potato | mitochondrion, plastid | 45.53 | 56.25 |
| HORVU1Hr1G070420.1 | Barley | mitochondrion | 43.97 | 56.22 |
| TraesCS1A01G297600.1 | Wheat | mitochondrion | 43.97 | 56.22 |
| TraesCS1D01G293600.1 | Wheat | mitochondrion, plastid | 43.97 | 56.22 |
| Bra017012.1-P | Field mustard | cytosol | 44.75 | 56.1 |
| CDY52923 | Canola | cytosol | 44.75 | 56.1 |
| TraesCS3B01G380300.1 | Wheat | mitochondrion, plastid | 44.75 | 55.56 |
| GSMUA_Achr6P32790_001 | Banana | cytosol | 45.14 | 54.98 |
| AT2G40330.1 | Thale cress | cytosol | 45.91 | 54.88 |
| Zm00001d043014_P001 | Maize | cytosol | 45.14 | 54.46 |
| TraesCS3D01G342000.1 | Wheat | plastid | 43.58 | 54.37 |
| TraesCS3A01G348400.1 | Wheat | plastid | 43.58 | 54.37 |
| HORVU3Hr1G088100.1 | Barley | plastid | 43.58 | 54.37 |
| HORVU3Hr1G039010.1 | Barley | plastid | 43.58 | 54.37 |
| EES19683 | Sorghum | plastid | 45.53 | 54.17 |
| CDX74796 | Canola | cytosol, nucleus, plastid | 44.36 | 53.77 |
| Bra004967.1-P | Field mustard | mitochondrion | 43.97 | 53.3 |
| CDY18867 | Canola | cytosol, mitochondrion, nucleus, plastid | 43.97 | 53.3 |
| TraesCS2D01G087500.1 | Wheat | plastid | 44.36 | 53.27 |
| TraesCS2B01G105300.1 | Wheat | plastid | 44.75 | 53.0 |
| Bra000184.1-P | Field mustard | cytosol, mitochondrion | 43.19 | 52.36 |
| CDY07608 | Canola | cytosol, mitochondrion | 43.19 | 52.36 |
| CDY24911 | Canola | cytosol, mitochondrion | 43.19 | 52.11 |
| Os05t0473000-01 | Rice | cytosol | 43.97 | 52.07 |
| GSMUA_AchrUn_... | Banana | plastid | 31.91 | 51.9 |
| Zm00001d028793_P001 | Maize | cytosol, mitochondrion, plastid | 43.97 | 51.36 |
| Solyc06g050500.2.1 | Tomato | plastid | 54.86 | 51.27 |
| GSMUA_Achr11P... | Banana | cytosol, plastid | 31.52 | 51.27 |
| GSMUA_Achr9P17980_001 | Banana | cytosol | 29.57 | 51.01 |
| Zm00001d047705_P001 | Maize | plastid | 43.19 | 50.92 |
| KRH47929 | Soybean | cytosol | 36.58 | 50.81 |
| EER92405 | Sorghum | plastid | 43.58 | 50.45 |
| TraesCS4D01G191200.1 | Wheat | cytosol | 43.97 | 50.45 |
| TraesCS4B01G189800.1 | Wheat | cytosol | 43.97 | 50.45 |
| GSMUA_Achr5P29490_001 | Banana | plastid | 31.52 | 50.0 |
| HORVU4Hr1G055220.1 | Barley | cytosol | 43.58 | 50.0 |
| Os03t0297600-01 | Rice | cytosol | 44.36 | 49.78 |
| KRH52194 | Soybean | cytosol | 35.41 | 48.66 |
| KRH18155 | Soybean | cytosol | 35.8 | 48.17 |
| KRH61500 | Soybean | cytosol | 35.41 | 48.15 |
| KRH05492 | Soybean | cytosol | 35.02 | 47.87 |
| GSMUA_Achr8P21220_001 | Banana | cytosol | 31.52 | 47.65 |
| KRH65845 | Soybean | cytosol | 35.41 | 47.15 |
| KRH53449 | Soybean | cytosol | 35.02 | 47.12 |
| KRH11022 | Soybean | cytosol | 33.46 | 46.49 |
| KRH45453 | Soybean | cytosol | 38.13 | 46.23 |
| KRH65286 | Soybean | cytosol | 16.34 | 46.15 |
| KRH21267 | Soybean | cytosol | 33.07 | 45.95 |
| KRH75621 | Soybean | cytosol | 38.13 | 45.79 |
| KRH15519 | Soybean | cytosol | 35.8 | 43.81 |
| KRH74424 | Soybean | cytosol | 36.97 | 42.99 |
| GSMUA_Achr10P... | Banana | cytosol, plastid | 33.07 | 42.93 |
| KRH16733 | Soybean | cytosol | 17.51 | 42.86 |
| Os01t0827800-00 | Rice | plastid | 42.41 | 42.58 |
| OQU87775 | Sorghum | endoplasmic reticulum, extracellular | 44.36 | 41.91 |
| KRH06494 | Soybean | cytosol, extracellular, vacuole | 31.13 | 41.88 |
| TraesCS2A01G089400.1 | Wheat | plastid | 45.91 | 41.26 |
| Zm00001d012475_P001 | Maize | cytosol | 45.14 | 37.18 |
| KRH39536 | Soybean | plastid | 37.35 | 36.09 |
Protein Annotations
| EntrezGene:100808416 | MapMan:11.1.2.1.1.1 | Gene3D:3.30.530.20 | EMBL:ACUP02007128 | ncoils:Coil | EnsemblPlantsGene:GLYMA_11G233300 |
| GO:GO:0003674 | GO:GO:0004864 | GO:GO:0008150 | GO:GO:0030234 | GO:GO:0043086 | InterPro:IPR023393 |
| UniProt:K7LRS4 | EnsemblPlants:KRH31193 | ProteinID:KRH31193 | ProteinID:KRH31193.1 | PFAM:PF10604 | PANTHER:PTHR31213 |
| PANTHER:PTHR31213:SF3 | InterPro:Polyketide_cyclase/dehydratase | SUPFAM:SSF55961 | InterPro:START-like_dom_sf | UniParc:UPI000296E9B5 | SEG:seg |
Description
hypothetical protein
Coordinates
chr11:-:32849168..32850385
Molecular Weight (calculated)
28352.9 Da
IEP (calculated)
7.607
GRAVY (calculated)
-0.070
Length
257 amino acids
Sequence
(BLAST)
(BLAST)
001: MLLLQHQQTH IYIAPEIFFY YKFKLIIIMP SSLHFDRFNP ITHAATTVAI ANGVNCPKQP QAPPSSTAAR RLVVPSLSSG RGIAAPDTVA LHHAHVVDPN
101: QCCSIVTQHI NAPVSAVWAV VRRFDNPQGY KNFVRSCHVI TGDGIRVGAV REVRVVSGLP AETSTERLEI LDDERHVISF SMVGGDHRLR NYQSVTTLHA
201: NGNGTLVIES YVVDVPQGNT KEETCVFVDT IVRCNLQSLA QIAENRTNNC EHTAQHC
101: QCCSIVTQHI NAPVSAVWAV VRRFDNPQGY KNFVRSCHVI TGDGIRVGAV REVRVVSGLP AETSTERLEI LDDERHVISF SMVGGDHRLR NYQSVTTLHA
201: NGNGTLVIES YVVDVPQGNT KEETCVFVDT IVRCNLQSLA QIAENRTNNC EHTAQHC
001: MPTSIQFQRS STAAEAANAT VRNYPHHHQK QVQKVSLTRG MADVPEHVEL SHTHVVGPSQ CFSVVVQDVE APVSTVWSIL SRFEHPQAYK HFVKSCHVVI
101: GDGREVGSVR EVRVVSGLPA AFSLERLEIM DDDRHVISFS VVGGDHRLMN YKSVTTVHES EEDSDGKKRT RVVESYVVDV PAGNDKEETC SFADTIVRCN
201: LQSLAKLAEN TSKFS
101: GDGREVGSVR EVRVVSGLPA AFSLERLEIM DDDRHVISFS VVGGDHRLMN YKSVTTVHES EEDSDGKKRT RVVESYVVDV PAGNDKEETC SFADTIVRCN
201: LQSLAKLAEN TSKFS
Arabidopsis Description
PYL6Abscisic acid receptor PYL6 [Source:UniProtKB/Swiss-Prot;Acc:Q8S8E3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.