Factsheet for Solyc05g052420.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 3
nucleus 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	secretory
MultiLoc:	mitochondrion
Plant-mPloc:	mitochondrion, nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc03g061590.2.1
Solyc08g062650.2.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G40330.1	Solyc08g062650.2.1	AT1G72770.1	19407142
AT2G40330.1	Solyc08g062650.2.1	AT1G72770.1	19624469
AT2G40330.1	Solyc03g061590.2.1	AT2G20000.1	17944809

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400069734	Potato	mitochondrion, plastid	90.24	35.58
GSMUA_Achr9P04600_001	Banana	cytosol	57.32	32.87
GSMUA_AchrUn_...	Banana	plastid	60.98	31.65
GSMUA_Achr11P...	Banana	cytosol, plastid	59.76	31.01
GSMUA_Achr9P17980_001	Banana	cytosol	56.1	30.87
GSMUA_Achr5P29490_001	Banana	plastid	57.32	29.01
GSMUA_Achr8P21220_001	Banana	cytosol	57.32	27.65
KRH73249	Soybean	plastid	67.07	26.44
Solyc03g095780.1.1	Tomato	plastid	64.63	26.37
TraesCS4A01G114400.1	Wheat	cytosol	54.88	25.14
Zm00001d038436_P001	Maize	plastid	60.98	25.0
KRH14908	Soybean	plastid	65.85	24.77
GSMUA_Achr10P...	Banana	cytosol, plastid	59.76	24.75
Solyc08g065410.1.1	Tomato	cytosol	43.9	24.66
Solyc10g076410.1.1	Tomato	plastid	60.98	24.63
Solyc09g015380.1.1	Tomato	plastid	59.76	24.38
GSMUA_Achr6P32790_001	Banana	cytosol	62.2	24.17
CDY52923	Canola	cytosol	59.76	23.9
Bra017012.1-P	Field mustard	cytosol	59.76	23.9
CDX93191	Canola	cytosol	58.54	23.65
HORVU3Hr1G039010.1	Barley	plastid	58.54	23.3
HORVU3Hr1G088100.1	Barley	plastid	58.54	23.3
TraesCS3A01G348400.1	Wheat	plastid	58.54	23.3
TraesCS3D01G342000.1	Wheat	plastid	58.54	23.3
TraesCS1B01G306800.1	Wheat	mitochondrion	54.88	23.2
TraesCS3B01G380300.1	Wheat	mitochondrion, plastid	58.54	23.19
EES19683	Sorghum	plastid	60.98	23.15
Zm00001d043014_P001	Maize	cytosol	59.76	23.0
Solyc10g085310.1.1	Tomato	plastid	59.76	23.0
CDY24911	Canola	cytosol, mitochondrion	59.76	23.0
TraesCS1D01G293600.1	Wheat	mitochondrion, plastid	56.1	22.89
TraesCS1A01G297600.1	Wheat	mitochondrion	56.1	22.89
HORVU1Hr1G070420.1	Barley	mitochondrion	56.1	22.89
AT2G40330.1	Thale cress	cytosol	59.76	22.79
Bra000184.1-P	Field mustard	cytosol, mitochondrion	58.54	22.64
CDX74796	Canola	cytosol, nucleus, plastid	58.54	22.64
CDY07608	Canola	cytosol, mitochondrion	58.54	22.64
TraesCS2B01G105300.1	Wheat	plastid	59.76	22.58
Solyc06g050500.2.1	Tomato	plastid	75.61	22.55
TraesCS2D01G087500.1	Wheat	plastid	58.54	22.43
Bra004967.1-P	Field mustard	mitochondrion	57.32	22.17
CDY18867	Canola	cytosol, mitochondrion, nucleus, plastid	57.32	22.17
Os05t0473000-01	Rice	cytosol	57.32	21.66
Solyc01g095700.2.1	Tomato	cytosol	47.56	20.97
Solyc06g061180.1.1	Tomato	nucleus	53.66	20.66
Zm00001d047705_P001	Maize	plastid	54.88	20.64
Solyc08g082180.2.1	Tomato	cytosol	47.56	20.63
KRH31193	Soybean	cytosol, golgi, plastid	64.63	20.62
Solyc03g007310.2.1	Tomato	cytosol	46.34	20.54
TraesCS4B01G189800.1	Wheat	cytosol	56.1	20.54
Zm00001d028793_P001	Maize	cytosol, mitochondrion, plastid	54.88	20.45
Solyc12g055990.1.1	Tomato	cytosol	45.12	20.44
EER92405	Sorghum	plastid	54.88	20.27
HORVU4Hr1G055220.1	Barley	cytosol	54.88	20.09
TraesCS4D01G191200.1	Wheat	cytosol	54.88	20.09
Solyc08g076960.1.1	Tomato	extracellular	56.1	19.91
Os03t0297600-01	Rice	cytosol	54.88	19.65
Os01t0827800-00	Rice	plastid	59.76	19.14
OQU87775	Sorghum	endoplasmic reticulum, extracellular	58.54	17.65
Solyc12g095970.1.1	Tomato	cytosol	40.24	17.37
TraesCS2A01G089400.1	Wheat	plastid	58.54	16.78
Zm00001d012475_P001	Maize	cytosol	62.2	16.35
Solyc02g076770.1.1	Tomato	cytosol	37.8	14.22

Protein Annotations

EnsemblPlants:Solyc05g052420.1.1	EnsemblPlantsGene:Solyc05g052420.1	Gene3D:3.30.530.20	InterPro:IPR023393	InterPro:START-like_dom_sf	PANTHER:PTHR31213
PANTHER:PTHR31213:SF48	SEG:seg	SUPFAM:SSF55961	UniParc:UPI0002765D0E	UniProt:K4C1S3	MapMan:11.1.2.1.1.1

Description

No Description!

Coordinates

chr5:+:62649889..62650137

Molecular Weight (calculated)

9031.6 Da

IEP (calculated)

5.651

GRAVY (calculated)

-0.416

Length

82 amino acids

Sequence
(BLAST)

1: MSISIIGGDH RLNNYRSVTT LHRAAADDGG DGGRTVVVES YVVDVPQGNT KEETRVFIDT IVRCNLQWLG QIAENLEKTK SN

Best Arabidopsis Sequence Match ( AT2G40330.1 )
(BLAST)

001: MPTSIQFQRS STAAEAANAT VRNYPHHHQK QVQKVSLTRG MADVPEHVEL SHTHVVGPSQ CFSVVVQDVE APVSTVWSIL SRFEHPQAYK HFVKSCHVVI
101: GDGREVGSVR EVRVVSGLPA AFSLERLEIM DDDRHVISFS VVGGDHRLMN YKSVTTVHES EEDSDGKKRT RVVESYVVDV PAGNDKEETC SFADTIVRCN
201: LQSLAKLAEN TSKFS

Arabidopsis Description

PYL6Abscisic acid receptor PYL6 [Source:UniProtKB/Swiss-Prot;Acc:Q8S8E3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.