Factsheet for GSMUA_Achr8P21220_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 2
cytosol 3
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	secretory
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr11P...
GSMUA_Achr1P19740_001
GSMUA_Achr3P26270_001
GSMUA_Achr5P29000_001
GSMUA_Achr6P15180_001
GSMUA_Achr7P24000_001
GSMUA_Achr8P05700_001
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G38310.1	GSMUA_Achr3P26270_001	AT1G72770.1	19407142
AT2G38310.1	GSMUA_Achr7P24000_001	AT1G72770.1	19407142
AT2G38310.1	GSMUA_Achr8P05700_001	AT1G72770.1	19407142
AT2G38310.1	GSMUA_Achr3P26270_001	AT1G72770.1	19624469
AT2G38310.1	GSMUA_Achr7P24000_001	AT1G72770.1	19624469
AT2G38310.1	GSMUA_Achr8P05700_001	AT1G72770.1	19624469
AT2G38310.1	GSMUA_Achr11P...	AT3G11410.1	19407142
AT2G38310.1	GSMUA_Achr5P29000_001	AT3G11410.1	19407142
AT2G38310.1	GSMUA_Achr6P15180_001	AT3G11410.1	19407142
AT2G38310.1	GSMUA_AchrUn_...	AT3G11410.1	19407142
AT2G38310.1	GSMUA_Achr11P...	AT5G59220.1	19407142
AT2G38310.1	GSMUA_Achr5P29000_001	AT5G59220.1	19407142
AT2G38310.1	GSMUA_Achr6P15180_001	AT5G59220.1	19407142
AT2G38310.1	GSMUA_AchrUn_...	AT5G59220.1	19407142
AT2G40330.1	GSMUA_Achr3P26270_001	AT1G72770.1	19407142
AT2G40330.1	GSMUA_Achr7P24000_001	AT1G72770.1	19407142
AT2G40330.1	GSMUA_Achr8P05700_001	AT1G72770.1	19407142
AT2G40330.1	GSMUA_Achr3P26270_001	AT1G72770.1	19624469
AT2G40330.1	GSMUA_Achr7P24000_001	AT1G72770.1	19624469
AT2G40330.1	GSMUA_Achr8P05700_001	AT1G72770.1	19624469
AT2G40330.1	GSMUA_Achr1P19740_001	AT2G20000.1	17944809
AT5G05440.1	GSMUA_Achr3P26270_001	AT1G72770.1	19407142
AT5G05440.1	GSMUA_Achr7P24000_001	AT1G72770.1	19407142
AT5G05440.1	GSMUA_Achr8P05700_001	AT1G72770.1	19407142
AT5G05440.1	GSMUA_Achr3P26270_001	AT1G72770.1	19624469
AT5G05440.1	GSMUA_Achr7P24000_001	AT1G72770.1	19624469
AT5G05440.1	GSMUA_Achr8P05700_001	AT1G72770.1	19624469

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P17980_001	Banana	cytosol	70.0	79.87
GSMUA_AchrUn_...	Banana	plastid	71.76	77.22
GSMUA_Achr9P04600_001	Banana	cytosol	62.94	74.83
GSMUA_Achr11P...	Banana	cytosol, plastid	62.35	67.09
GSMUA_Achr5P29490_001	Banana	plastid	62.35	65.43
GSMUA_Achr10P...	Banana	cytosol, plastid	68.24	58.59
Solyc05g052420.1.1	Tomato	cytosol	27.65	57.32
TraesCS4A01G114400.1	Wheat	cytosol	54.12	51.4
GSMUA_Achr6P32790_001	Banana	cytosol	62.94	50.71
TraesCS2D01G087500.1	Wheat	plastid	60.59	48.13
Zm00001d028793_P001	Maize	cytosol, mitochondrion, plastid	61.18	47.27
TraesCS2B01G105300.1	Wheat	plastid	60.0	47.0
Zm00001d047705_P001	Maize	plastid	60.0	46.79
Bra028758.1-P	Field mustard	cytosol	45.29	46.67
HORVU4Hr1G055220.1	Barley	cytosol	61.18	46.43
TraesCS4B01G189800.1	Wheat	cytosol	60.59	45.98
EER92405	Sorghum	plastid	60.0	45.95
KRH00319	Soybean	cytosol	47.65	45.76
TraesCS4D01G191200.1	Wheat	cytosol	60.0	45.54
Os03t0297600-01	Rice	cytosol	60.59	44.98
KRH49452	Soybean	plastid	45.29	43.26
KRH76014	Soybean	cytosol	54.12	42.59
KRH73249	Soybean	plastid	51.18	41.83
CDX98844	Canola	cytosol	49.41	41.18
CDY04951	Canola	cytosol	47.65	41.12
VIT_13s0067g01940.t01	Wine grape	plastid	51.18	41.04
AT5G05440.1	Thale cress	cytosol	48.82	40.89
CDX80959	Canola	cytosol	48.82	40.89
Bra009113.1-P	Field mustard	cytosol	48.82	40.69
CDX70150	Canola	cytosol	48.82	40.69
Solyc10g085310.1.1	Tomato	plastid	50.59	40.38
PGSC0003DMT400028658	Potato	nucleus	50.59	40.38
Solyc03g095780.1.1	Tomato	plastid	47.65	40.3
VIT_08s0058g00470.t01	Wine grape	plastid	53.53	40.09
CDY72318	Canola	cytosol	47.65	39.9
Bra005853.1-P	Field mustard	cytosol	47.65	39.9
Solyc10g076410.1.1	Tomato	plastid	47.65	39.9
CDY07739	Canola	plastid	48.24	39.61
PGSC0003DMT400041080	Potato	mitochondrion	48.24	39.61
Bra000052.1-P	Field mustard	plastid	48.24	39.61
PGSC0003DMT400053120	Potato	cytosol, plastid	46.47	39.3
PGSC0003DMT400053119	Potato	cytosol, plastid	46.47	39.3
PGSC0003DMT400053102	Potato	cytosol, plastid	46.47	39.3
CDY18391	Canola	plastid	47.06	39.22
CDY54415	Canola	cytosol	47.06	39.22
Bra017125.1-P	Field mustard	plastid	47.06	39.22
AT2G38310.1	Thale cress	plastid	47.06	38.65
CDY14471	Canola	plastid	47.06	38.65
KRH14908	Soybean	plastid	49.41	38.53
GSMUA_Achr4P10630_001	Banana	mitochondrion	36.47	38.51
CDX91449	Canola	plastid	46.47	38.16
CDY54453	Canola	plastid	46.47	37.98
Solyc09g015380.1.1	Tomato	plastid	44.71	37.81
CDX93191	Canola	cytosol	44.71	37.44
PGSC0003DMT400061535	Potato	plastid	47.65	37.16
Bra017012.1-P	Field mustard	cytosol	44.71	37.07
CDY52923	Canola	cytosol	44.71	37.07
GSMUA_Achr4P19170_001	Banana	cytosol	41.76	36.6
PGSC0003DMT400069734	Potato	mitochondrion, plastid	44.71	36.54
TraesCS2A01G089400.1	Wheat	plastid	60.59	36.01
PGSC0003DMT400075056	Potato	plastid	44.71	35.51
GSMUA_Achr8P14780_001	Banana	cytosol	42.94	35.44
CDX74796	Canola	cytosol, nucleus, plastid	44.12	35.38
Bra000184.1-P	Field mustard	cytosol, mitochondrion	43.53	34.91
CDY07608	Canola	cytosol, mitochondrion	43.53	34.91
AT2G40330.1	Thale cress	cytosol	44.12	34.88
CDY24911	Canola	cytosol, mitochondrion	43.53	34.74
Bra004967.1-P	Field mustard	mitochondrion	42.94	34.43
CDY18867	Canola	cytosol, mitochondrion, nucleus, plastid	42.94	34.43
GSMUA_Achr7P09320_001	Banana	cytosol	37.65	34.41
GSMUA_Achr6P00980_001	Banana	cytosol	38.82	33.85
GSMUA_Achr10P...	Banana	cytosol	38.82	33.5
GSMUA_Achr10P...	Banana	cytosol	36.47	33.33
GSMUA_Achr10P...	Banana	cytosol	35.88	32.8
GSMUA_AchrUn_...	Banana	cytosol	35.88	32.8
GSMUA_Achr2P19970_001	Banana	cytosol	34.71	31.72
KRH31193	Soybean	cytosol, golgi, plastid	47.65	31.52
Bra005115.1-P	Field mustard	plastid	27.06	30.87
Solyc06g050500.2.1	Tomato	plastid	49.41	30.55
GSMUA_Achr4P08490_001	Banana	cytosol	35.29	30.15
GSMUA_Achr4P15170_001	Banana	cytosol	43.53	29.6
GSMUA_Achr3P03480_001	Banana	cytosol	35.29	29.13
GSMUA_Achr8P19910_001	Banana	mitochondrion	35.29	28.71
GSMUA_Achr4P15670_001	Banana	cytosol	30.0	27.27
GSMUA_Achr2P15420_001	Banana	cytosol, mitochondrion, nucleus, plastid	34.12	25.44

Protein Annotations

EnsemblPlants:GSMUA_Achr8P21220_001	EnsemblPlants:GSMUA_Achr8T21220_001	EnsemblPlantsGene:GSMUA_Achr8G21220_001	Gene3D:3.30.530.20	InterPro:IPR023393	InterPro:Polyketide_cyclase/dehydratase
InterPro:START-like_dom_sf	PANTHER:PTHR31213	PANTHER:PTHR31213:SF3	PFAM:PF10604	SEG:seg	SUPFAM:SSF55961
UniParc:UPI0002955093	UniProt:M0TSC5	MapMan:11.1.2.1.1.1	:	:	:

Description

Putative Predicted protein [Source:GMGC_GENE;Acc:GSMUA_Achr8G21220_001]

Coordinates

chr8:+:26195997..26196644

Molecular Weight (calculated)

18134.5 Da

IEP (calculated)

7.619

GRAVY (calculated)

-0.171

Length

170 amino acids

Sequence
(BLAST)

001: MPYNSPPEPS VQVQRVTGGG GGVMGARERC TAHELPEATA KHHEHAVGAR QCCSAVVKRV AAPVAAVWAV RLEILDDEHH VLSFRVVGGE HRLANYRSVT
101: TLHPDTAGAA EGTVVVESYV VDVPPGNTRD DTRLFVDTIV RCNLQSLART AEALNRRGGA TAVAVRMANP

Best Arabidopsis Sequence Match ( AT5G05440.1 )
(BLAST)

001: MRSPVQLQHG SDATNGFHTL QPHDQTDGPI KRVCLTRGMH VPEHVAMHHT HDVGPDQCCS SVVQMIHAPP ESVWALVRRF DNPKVYKNFI RQCRIVQGDG
101: LHVGDLREVM VVSGLPAVSS TERLEILDEE RHVISFSVVG GDHRLKNYRS VTTLHASDDE GTVVVESYIV DVPPGNTEEE TLSFVDTIVR CNLQSLARST
201: NRQ

Arabidopsis Description

PYL5Abscisic acid receptor PYL5 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLB1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.