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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • plastid 2
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus, plastid
BaCelLo:nucleus
ChloroP:plastid
iPSORT:plastid
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra017125.1-P Field mustard plastid 99.51 99.51
CDY18391 Canola plastid 99.51 99.51
CDX91449 Canola plastid 93.63 92.27
CDY54453 Canola plastid 92.65 90.87
CDY07739 Canola plastid 91.67 90.34
CDY14471 Canola plastid 91.67 90.34
KRH00319 Soybean cytosol 61.76 71.19
KRH49452 Soybean plastid 60.29 69.1
TraesCS4A01G114400.1 Wheat cytosol 55.39 63.13
Solyc10g085310.1.1 Tomato plastid 65.2 62.44
Solyc09g015380.1.1 Tomato plastid 61.27 62.19
PGSC0003DMT400028658 Potato nucleus 64.71 61.97
Solyc10g076410.1.1 Tomato plastid 59.8 60.1
VIT_13s0067g01940.t01 Wine grape plastid 62.25 59.91
PGSC0003DMT400041080 Potato mitochondrion 60.78 59.9
PGSC0003DMT400075056 Potato plastid 62.25 59.35
KRH76014 Soybean cytosol 62.75 59.26
VIT_08s0058g00470.t01 Wine grape plastid 65.69 59.03
TraesCS1B01G306800.1 Wheat mitochondrion 55.88 58.76
TraesCS1A01G297600.1 Wheat mitochondrion 56.86 57.71
TraesCS1D01G293600.1 Wheat mitochondrion, plastid 56.37 57.21
Zm00001d038436_P001 Maize plastid 55.88 57.0
CDX98844 Canola cytosol 56.86 56.86
CDY04951 Canola cytosol 54.9 56.85
HORVU1Hr1G070420.1 Barley mitochondrion 55.88 56.72
GSMUA_Achr9P04600_001 Banana cytosol 39.71 56.64
CDX70150 Canola cytosol 56.37 56.37
GSMUA_Achr6P32790_001 Banana cytosol 57.84 55.92
TraesCS3A01G348400.1 Wheat plastid 56.37 55.83
TraesCS3D01G342000.1 Wheat plastid 56.37 55.83
HORVU3Hr1G088100.1 Barley plastid 56.37 55.83
HORVU3Hr1G039010.1 Barley plastid 56.37 55.83
TraesCS3B01G380300.1 Wheat mitochondrion, plastid 56.37 55.56
CDX93191 Canola cytosol 54.9 55.17
CDY72318 Canola cytosol 54.9 55.17
CDY52923 Canola cytosol 55.39 55.12
CDX74796 Canola cytosol, nucleus, plastid 56.86 54.72
CDX80959 Canola cytosol 54.41 54.68
CDY68675 Canola cytosol 43.14 54.32
CDY58053 Canola cytosol 43.14 54.32
TraesCS2D01G087500.1 Wheat plastid 56.86 54.21
Os05t0473000-01 Rice cytosol 57.35 53.92
TraesCS2B01G105300.1 Wheat plastid 57.35 53.92
EES19683 Sorghum plastid 56.86 53.7
Zm00001d047705_P001 Maize plastid 56.86 53.21
EER92405 Sorghum plastid 57.84 53.15
TraesCS4D01G191200.1 Wheat cytosol 57.84 52.68
TraesCS4B01G189800.1 Wheat cytosol 57.84 52.68
HORVU4Hr1G055220.1 Barley cytosol 57.35 52.23
CDY18867 Canola cytosol, mitochondrion, nucleus, plastid 53.92 51.89
Zm00001d028793_P001 Maize cytosol, mitochondrion, plastid 55.88 51.82
Os03t0297600-01 Rice cytosol 57.84 51.53
GSMUA_AchrUn_... Banana plastid 39.71 51.27
CDX99450 Canola cytosol 41.67 51.2
CDY58019 Canola cytosol 41.67 51.2
CDX78879 Canola cytosol 41.67 51.2
CDY24911 Canola cytosol, mitochondrion 53.43 51.17
GSMUA_Achr9P17980_001 Banana cytosol 37.25 51.01
CDY07608 Canola cytosol, mitochondrion 52.94 50.94
Zm00001d043014_P001 Maize cytosol 52.45 50.23
CDX90440 Canola cytosol 46.57 49.74
CDY01498 Canola cytosol 46.57 49.74
CDY70860 Canola cytosol 45.1 49.46
GSMUA_Achr5P29490_001 Banana plastid 39.22 49.38
GSMUA_Achr11P... Banana cytosol, plastid 37.25 48.1
CDY69797 Canola cytosol 44.61 47.64
CDY11503 Canola cytosol 43.63 47.34
CDX76731 Canola cytosol 43.63 47.34
GSMUA_Achr8P21220_001 Banana cytosol 39.22 47.06
CDY15183 Canola cytosol 43.14 47.06
CDX90028 Canola cytosol 43.14 46.81
CDY04688 Canola cytosol 42.65 46.77
CDY49462 Canola cytosol 41.67 46.2
CDY61488 Canola cytosol 41.67 46.2
CDX89219 Canola cytosol 41.18 45.41
CDY64350 Canola cytosol 40.69 45.36
CDX96197 Canola cytosol 41.67 45.21
CDY38728 Canola cytosol 40.69 45.11
CDY25052 Canola cytosol 41.18 44.92
CDY58505 Canola nucleus 46.08 44.76
CDY53905 Canola cytosol 40.69 44.38
CDY70517 Canola cytosol 40.2 44.32
CDY27022 Canola cytosol 40.69 44.15
Os01t0827800-00 Rice plastid 55.39 44.14
CDX77691 Canola nucleus 46.08 43.72
CDX74368 Canola cytosol 41.18 43.52
GSMUA_Achr10P... Banana cytosol, plastid 42.16 43.43
CDX76554 Canola cytosol 32.84 43.23
CDY08877 Canola cytosol 32.35 42.58
CDX91871 Canola cytosol 40.2 42.49
TraesCS2A01G089400.1 Wheat plastid 56.86 40.56
CDX82120 Canola plastid 40.69 40.49
CDY48030 Canola plastid 40.69 40.49
CDY22516 Canola plastid 40.69 40.49
CDY03194 Canola nucleus 37.75 40.31
CDY68316 Canola nucleus 37.75 40.31
CDY07165 Canola cytosol 11.76 40.0
OQU87775 Sorghum endoplasmic reticulum, extracellular 50.0 37.5
Zm00001d012475_P001 Maize cytosol 51.96 33.97
Protein Annotations
EnsemblPlants:CDY54415EnsemblPlantsGene:GSBRNA2T00014080001Gene3D:3.30.530.20InterPro:IPR023393InterPro:Polyketide_cyclase/dehydrataseInterPro:START-like_dom_sf
PANTHER:PTHR31213PANTHER:PTHR31213:SF48PFAM:PF10604ProteinID:CDY54415ProteinID:CDY54415.1SEG:seg
SUPFAM:SSF55961UniParc:UPI0004EB2FDBUniProt:A0A078ITE5MapMan:11.1.2.1.1.1::
Description
BnaC04g56560DBnaC04g56560D protein [Source:UniProtKB/TrEMBL;Acc:A0A078ITE5]
Coordinates
chrLK033318:+:8609..9520
Molecular Weight (calculated)
21936.9 Da
IEP (calculated)
6.500
GRAVY (calculated)
-0.079
Length
204 amino acids
Sequence
(BLAST)
001: MLAVHRPSSA VSDGDTVQIP TMVQKRFPSL SCDATAARFH THEVGPNQCC SAVIQEISAP ISTVWSVVRR FDNPQAYKHF LKSCSVIDGD GGNVGSLRQV
101: HVVSGLPAAS STERLDILDD ERHVISFSVV GGDHRLSNYR SVTTLHSSPV SGTVVVESYV VDVPPGNTKE ETCDFVDVIV RCNLQSLAKI AEISAAEGNK
201: KTSM
Best Arabidopsis Sequence Match ( AT1G01360.1 )
(BLAST)
001: MMDGVEGGTA MYGGLETVQY VRTHHQHLCR ENQCTSALVK HIKAPLHLVW SLVRRFDQPQ KYKPFVSRCT VIGDPEIGSL REVNVKSGLP ATTSTERLEL
101: LDDEEHILGI KIIGGDHRLK NYSSILTVHP EIIEGRAGTM VIESFVVDVP QGNTKDETCY FVEALIRCNL KSLADVSERL ASQDITQ
Arabidopsis Description
PYL9RCAR1 [Source:UniProtKB/TrEMBL;Acc:A0A178W4H4]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.