Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G191200.1 | Wheat | cytosol | 99.11 | 99.11 |
| TraesCS4A01G114400.1 | Wheat | cytosol | 79.02 | 98.88 |
| HORVU4Hr1G055220.1 | Barley | cytosol | 97.77 | 97.77 |
| Os03t0297600-01 | Rice | cytosol | 87.05 | 85.15 |
| Zm00001d028793_P001 | Maize | cytosol, mitochondrion, plastid | 81.7 | 83.18 |
| EER92405 | Sorghum | plastid | 81.25 | 81.98 |
| Zm00001d047705_P001 | Maize | plastid | 78.57 | 80.73 |
| TraesCS2B01G105300.1 | Wheat | plastid | 70.09 | 72.35 |
| TraesCS1B01G306800.1 | Wheat | mitochondrion | 60.71 | 70.1 |
| GSMUA_Achr9P04600_001 | Banana | cytosol | 42.86 | 67.13 |
| GSMUA_Achr9P17980_001 | Banana | cytosol | 44.64 | 67.11 |
| GSMUA_AchrUn_... | Banana | plastid | 47.32 | 67.09 |
| KRH00319 | Soybean | cytosol | 51.79 | 65.54 |
| TraesCS3B01G380300.1 | Wheat | mitochondrion, plastid | 59.82 | 64.73 |
| GSMUA_Achr6P32790_001 | Banana | cytosol | 60.71 | 64.45 |
| KRH49452 | Soybean | plastid | 50.89 | 64.04 |
| Bra028758.1-P | Field mustard | cytosol | 45.54 | 61.82 |
| GSMUA_Achr8P21220_001 | Banana | cytosol | 45.98 | 60.59 |
| VIT_13s0067g01940.t01 | Wine grape | plastid | 56.25 | 59.43 |
| CDY18391 | Canola | plastid | 52.68 | 57.84 |
| CDY54415 | Canola | cytosol | 52.68 | 57.84 |
| Bra017125.1-P | Field mustard | plastid | 52.68 | 57.84 |
| CDX91449 | Canola | plastid | 53.12 | 57.49 |
| KRH76014 | Soybean | cytosol | 55.36 | 57.41 |
| Solyc03g095780.1.1 | Tomato | plastid | 50.89 | 56.72 |
| AT2G38310.1 | Thale cress | plastid | 52.23 | 56.52 |
| CDY54453 | Canola | plastid | 52.23 | 56.25 |
| KRH73249 | Soybean | plastid | 52.23 | 56.25 |
| PGSC0003DMT400053120 | Potato | cytosol, plastid | 50.45 | 56.22 |
| PGSC0003DMT400053102 | Potato | cytosol, plastid | 50.45 | 56.22 |
| PGSC0003DMT400053119 | Potato | cytosol, plastid | 50.45 | 56.22 |
| Solyc05g052420.1.1 | Tomato | cytosol | 20.54 | 56.1 |
| CDY14471 | Canola | plastid | 51.79 | 56.04 |
| CDY07739 | Canola | plastid | 51.79 | 56.04 |
| Bra000052.1-P | Field mustard | plastid | 51.79 | 56.04 |
| VIT_08s0058g00470.t01 | Wine grape | plastid | 56.7 | 55.95 |
| CDX93191 | Canola | cytosol | 50.0 | 55.17 |
| Solyc10g076410.1.1 | Tomato | plastid | 50.0 | 55.17 |
| Solyc10g085310.1.1 | Tomato | plastid | 52.23 | 54.93 |
| CDY52923 | Canola | cytosol | 50.0 | 54.63 |
| Bra017012.1-P | Field mustard | cytosol | 50.0 | 54.63 |
| PGSC0003DMT400041080 | Potato | mitochondrion | 50.45 | 54.59 |
| GSMUA_Achr10P... | Banana | cytosol, plastid | 48.21 | 54.55 |
| Bra005115.1-P | Field mustard | plastid | 36.16 | 54.36 |
| CDY04951 | Canola | cytosol | 47.77 | 54.31 |
| PGSC0003DMT400028658 | Potato | nucleus | 51.34 | 53.99 |
| Solyc09g015380.1.1 | Tomato | plastid | 48.21 | 53.73 |
| PGSC0003DMT400061535 | Potato | plastid | 52.23 | 53.67 |
| KRH14908 | Soybean | plastid | 51.79 | 53.21 |
| AT5G05440.1 | Thale cress | cytosol | 48.21 | 53.2 |
| Bra009113.1-P | Field mustard | cytosol | 48.21 | 52.94 |
| CDX98844 | Canola | cytosol | 48.21 | 52.94 |
| CDX70150 | Canola | cytosol | 48.21 | 52.94 |
| TraesCS7B01G269600.1 | Wheat | cytosol | 46.43 | 52.79 |
| CDY24911 | Canola | cytosol, mitochondrion | 49.55 | 52.11 |
| AT2G40330.1 | Thale cress | cytosol | 50.0 | 52.09 |
| PGSC0003DMT400069734 | Potato | mitochondrion, plastid | 48.21 | 51.92 |
| PGSC0003DMT400075056 | Potato | plastid | 49.55 | 51.87 |
| Bra000184.1-P | Field mustard | cytosol, mitochondrion | 48.66 | 51.42 |
| CDY07608 | Canola | cytosol, mitochondrion | 48.66 | 51.42 |
| CDX74796 | Canola | cytosol, nucleus, plastid | 48.66 | 51.42 |
| Bra005853.1-P | Field mustard | cytosol | 45.98 | 50.74 |
| CDY72318 | Canola | cytosol | 45.98 | 50.74 |
| CDX80959 | Canola | cytosol | 45.98 | 50.74 |
| Bra004967.1-P | Field mustard | mitochondrion | 47.77 | 50.47 |
| CDY18867 | Canola | cytosol, mitochondrion, nucleus, plastid | 47.32 | 50.0 |
| TraesCS1B01G206600.1 | Wheat | cytosol, unclear | 43.3 | 45.54 |
| KRH31193 | Soybean | cytosol, golgi, plastid | 50.45 | 43.97 |
| Solyc06g050500.2.1 | Tomato | plastid | 53.57 | 43.64 |
| TraesCS1B01G145800.1 | Wheat | cytosol | 38.84 | 42.44 |
| TraesCS7B01G232100.1 | Wheat | cytoskeleton, cytosol, nucleus | 31.7 | 36.41 |
Protein Annotations
| EnsemblPlants:TraesCS4B01G189800.1 | EnsemblPlantsGene:TraesCS4B01G189800 | Gene3D:3.30.530.20 | InterPro:IPR023393 | InterPro:Polyketide_cyclase/dehydratase | InterPro:START-like_dom_sf |
| PANTHER:PTHR31213 | PANTHER:PTHR31213:SF3 | PFAM:PF10604 | SEG:seg | SUPFAM:SSF55961 | TIGR:cd07821 |
| MapMan:11.1.2.1.1.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr4B:+:412590620..412591294
Molecular Weight (calculated)
23623.1 Da
IEP (calculated)
7.052
GRAVY (calculated)
0.028
Length
224 amino acids
Sequence
(BLAST)
(BLAST)
001: MPCIPVSSPS IQHHNHNHHH RVLAGVGVGM GCGAEAVVAA AGTAGMRCRE HDCEVPAEVA RHHEHAEPGS GQCCSAVVQH VAAPAAAVWS VVRRFDQPQA
101: YKRFVRSCAL VAGDGGVGTL REVHVVSGLP AASSRERLEI LDDESHVLSF RVVGGEHRLK NYLSVTTVHP SPAAPSSATV VVESYVVDVP AGNTIEDTRV
201: FIDTIVKCNL QSLAKTAEKL AAVS
101: YKRFVRSCAL VAGDGGVGTL REVHVVSGLP AASSRERLEI LDDESHVLSF RVVGGEHRLK NYLSVTTVHP SPAAPSSATV VVESYVVDVP AGNTIEDTRV
201: FIDTIVKCNL QSLAKTAEKL AAVS
001: MMDGVEGGTA MYGGLETVQY VRTHHQHLCR ENQCTSALVK HIKAPLHLVW SLVRRFDQPQ KYKPFVSRCT VIGDPEIGSL REVNVKSGLP ATTSTERLEL
101: LDDEEHILGI KIIGGDHRLK NYSSILTVHP EIIEGRAGTM VIESFVVDVP QGNTKDETCY FVEALIRCNL KSLADVSERL ASQDITQ
101: LDDEEHILGI KIIGGDHRLK NYSSILTVHP EIIEGRAGTM VIESFVVDVP QGNTKDETCY FVEALIRCNL KSLADVSERL ASQDITQ
Arabidopsis Description
PYL9RCAR1 [Source:UniProtKB/TrEMBL;Acc:A0A178W4H4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.