Factsheet for GSMUA_Achr6P32790_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr11P...
GSMUA_Achr1P19740_001
GSMUA_Achr3P26270_001
GSMUA_Achr5P29000_001
GSMUA_Achr6P15180_001
GSMUA_Achr7P24000_001
GSMUA_Achr8P05700_001
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G38310.1	GSMUA_Achr3P26270_001	AT1G72770.1	19407142
AT2G38310.1	GSMUA_Achr7P24000_001	AT1G72770.1	19407142
AT2G38310.1	GSMUA_Achr8P05700_001	AT1G72770.1	19407142
AT2G38310.1	GSMUA_Achr3P26270_001	AT1G72770.1	19624469
AT2G38310.1	GSMUA_Achr7P24000_001	AT1G72770.1	19624469
AT2G38310.1	GSMUA_Achr8P05700_001	AT1G72770.1	19624469
AT2G38310.1	GSMUA_Achr11P...	AT3G11410.1	19407142
AT2G38310.1	GSMUA_Achr5P29000_001	AT3G11410.1	19407142
AT2G38310.1	GSMUA_Achr6P15180_001	AT3G11410.1	19407142
AT2G38310.1	GSMUA_AchrUn_...	AT3G11410.1	19407142
AT2G38310.1	GSMUA_Achr11P...	AT5G59220.1	19407142
AT2G38310.1	GSMUA_Achr5P29000_001	AT5G59220.1	19407142
AT2G38310.1	GSMUA_Achr6P15180_001	AT5G59220.1	19407142
AT2G38310.1	GSMUA_AchrUn_...	AT5G59220.1	19407142
AT2G40330.1	GSMUA_Achr3P26270_001	AT1G72770.1	19407142
AT2G40330.1	GSMUA_Achr7P24000_001	AT1G72770.1	19407142
AT2G40330.1	GSMUA_Achr8P05700_001	AT1G72770.1	19407142
AT2G40330.1	GSMUA_Achr3P26270_001	AT1G72770.1	19624469
AT2G40330.1	GSMUA_Achr7P24000_001	AT1G72770.1	19624469
AT2G40330.1	GSMUA_Achr8P05700_001	AT1G72770.1	19624469
AT2G40330.1	GSMUA_Achr1P19740_001	AT2G20000.1	17944809
AT5G05440.1	GSMUA_Achr3P26270_001	AT1G72770.1	19407142
AT5G05440.1	GSMUA_Achr7P24000_001	AT1G72770.1	19407142
AT5G05440.1	GSMUA_Achr8P05700_001	AT1G72770.1	19407142
AT5G05440.1	GSMUA_Achr3P26270_001	AT1G72770.1	19624469
AT5G05440.1	GSMUA_Achr7P24000_001	AT1G72770.1	19624469
AT5G05440.1	GSMUA_Achr8P05700_001	AT1G72770.1	19624469

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P04600_001	Banana	cytosol	54.5	80.42
TraesCS4A01G114400.1	Wheat	cytosol	61.61	72.63
KRH00319	Soybean	cytosol	58.29	69.49
GSMUA_AchrUn_...	Banana	plastid	51.66	68.99
GSMUA_Achr9P17980_001	Banana	cytosol	48.34	68.46
KRH49452	Soybean	plastid	56.4	66.85
Bra028758.1-P	Field mustard	cytosol	51.66	66.06
GSMUA_Achr8P21220_001	Banana	cytosol	50.71	62.94
Solyc05g052420.1.1	Tomato	cytosol	24.17	62.2
TraesCS2D01G087500.1	Wheat	plastid	63.03	62.15
GSMUA_Achr11P...	Banana	cytosol, plastid	45.97	61.39
TraesCS2B01G105300.1	Wheat	plastid	63.03	61.29
Os03t0297600-01	Rice	cytosol	66.35	61.14
GSMUA_Achr5P29490_001	Banana	plastid	46.92	61.11
TraesCS4B01G189800.1	Wheat	cytosol	64.45	60.71
Zm00001d047705_P001	Maize	plastid	62.56	60.55
HORVU4Hr1G055220.1	Barley	cytosol	63.98	60.27
TraesCS4D01G191200.1	Wheat	cytosol	63.98	60.27
Solyc03g095780.1.1	Tomato	plastid	57.35	60.2
GSMUA_Achr10P...	Banana	cytosol, plastid	55.92	59.6
Zm00001d028793_P001	Maize	cytosol, mitochondrion, plastid	62.09	59.55
EER92405	Sorghum	plastid	62.56	59.46
PGSC0003DMT400053120	Potato	cytosol, plastid	55.92	58.71
PGSC0003DMT400053119	Potato	cytosol, plastid	55.92	58.71
PGSC0003DMT400053102	Potato	cytosol, plastid	55.92	58.71
Solyc10g085310.1.1	Tomato	plastid	59.24	58.69
PGSC0003DMT400028658	Potato	nucleus	59.24	58.69
KRH73249	Soybean	plastid	57.82	58.65
VIT_13s0067g01940.t01	Wine grape	plastid	58.77	58.49
KRH76014	Soybean	cytosol	59.72	58.33
CDY54415	Canola	cytosol	55.92	57.84
CDY18391	Canola	plastid	55.92	57.84
Bra017125.1-P	Field mustard	plastid	55.92	57.84
Bra000052.1-P	Field mustard	plastid	56.4	57.49
AT2G38310.1	Thale cress	plastid	56.4	57.49
CDY07739	Canola	plastid	56.4	57.49
Solyc09g015380.1.1	Tomato	plastid	54.5	57.21
GSMUA_Achr4P10630_001	Banana	mitochondrion	43.6	57.14
PGSC0003DMT400041080	Potato	mitochondrion	55.92	57.0
CDY14471	Canola	plastid	55.45	56.52
CDX91449	Canola	plastid	55.45	56.52
PGSC0003DMT400061535	Potato	plastid	58.29	56.42
VIT_08s0058g00470.t01	Wine grape	plastid	60.66	56.39
Solyc10g076410.1.1	Tomato	plastid	54.03	56.16
CDY04951	Canola	cytosol	52.13	55.84
CDY54453	Canola	plastid	54.98	55.77
AT5G05440.1	Thale cress	cytosol	53.55	55.66
CDX98844	Canola	cytosol	53.55	55.39
PGSC0003DMT400075056	Potato	plastid	55.92	55.14
KRH14908	Soybean	plastid	56.87	55.05
CDX70150	Canola	cytosol	53.08	54.9
Bra009113.1-P	Field mustard	cytosol	53.08	54.9
CDX93191	Canola	cytosol	52.13	54.19
PGSC0003DMT400069734	Potato	mitochondrion, plastid	53.08	53.85
CDY72318	Canola	cytosol	51.66	53.69
Bra005853.1-P	Field mustard	cytosol	51.66	53.69
CDX80959	Canola	cytosol	51.66	53.69
Bra005115.1-P	Field mustard	plastid	37.91	53.69
Bra017012.1-P	Field mustard	cytosol	52.13	53.66
CDY52923	Canola	cytosol	52.13	53.66
CDX74796	Canola	cytosol, nucleus, plastid	52.13	51.89
AT2G40330.1	Thale cress	cytosol	52.61	51.63
Bra004967.1-P	Field mustard	mitochondrion	51.18	50.94
GSMUA_Achr7P09320_001	Banana	cytosol	44.55	50.54
GSMUA_Achr2P19970_001	Banana	cytosol	44.55	50.54
CDY24911	Canola	cytosol, mitochondrion	50.71	50.23
GSMUA_AchrUn_...	Banana	cytosol	44.08	50.0
Bra000184.1-P	Field mustard	cytosol, mitochondrion	50.24	50.0
CDY07608	Canola	cytosol, mitochondrion	50.24	50.0
CDY18867	Canola	cytosol, mitochondrion, nucleus, plastid	50.24	50.0
GSMUA_Achr10P...	Banana	cytosol	43.6	49.46
GSMUA_Achr10P...	Banana	cytosol	43.6	49.46
GSMUA_Achr4P19170_001	Banana	cytosol	45.02	48.97
GSMUA_Achr6P00980_001	Banana	cytosol	45.02	48.72
GSMUA_Achr10P...	Banana	cytosol	44.08	47.21
GSMUA_Achr4P08490_001	Banana	cytosol	44.08	46.73
TraesCS2A01G089400.1	Wheat	plastid	62.56	46.15
GSMUA_Achr8P14780_001	Banana	cytosol	45.02	46.12
Solyc06g050500.2.1	Tomato	plastid	59.24	45.45
KRH31193	Soybean	cytosol, golgi, plastid	54.98	45.14
GSMUA_Achr3P03480_001	Banana	cytosol	43.6	44.66
GSMUA_Achr8P19910_001	Banana	mitochondrion	43.13	43.54
GSMUA_Achr4P15670_001	Banana	cytosol	38.39	43.32
GSMUA_Achr4P15170_001	Banana	cytosol	51.18	43.2
GSMUA_Achr2P15420_001	Banana	cytosol, mitochondrion, nucleus, plastid	42.18	39.04

Protein Annotations

EnsemblPlants:GSMUA_Achr6P32790_001	EnsemblPlants:GSMUA_Achr6T32790_001	EnsemblPlantsGene:GSMUA_Achr6G32790_001	Gene3D:3.30.530.20	InterPro:IPR023393	InterPro:Polyketide_cyclase/dehydratase
InterPro:START-like_dom_sf	PANTHER:PTHR31213	PANTHER:PTHR31213:SF3	PFAM:PF10604	SEG:seg	SUPFAM:SSF55961
UniParc:UPI000294C9CB	UniProt:M0TC73	MapMan:11.1.2.1.1.1	:	:	:

Description

cyclase/dehydrase family protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr6G32790_001]

Coordinates

chr6:+:32025257..32026042

Molecular Weight (calculated)

22641.6 Da

IEP (calculated)

5.881

GRAVY (calculated)

-0.160

Length

211 amino acids

Sequence
(BLAST)

001: MPCLPGTRTC IEHQEEETEW ERCTAHEVPE AVASYHEHAV GLNQCCSAVV QAVKAPVAAV WSVVRRFDQP QAYKQFVRRC DVVVGDGDVG TLREVSVVSG
101: LPAATSTERL EILDDERHVL SFRVVGGEHR LANYRSVTTL HQDGGSGGGG GRTVVVESYV VDVPPGNTTE ETRVFVDTIV RCNLQSLART AQGLSSSAAA
201: TAAAGGQRII K

Best Arabidopsis Sequence Match ( AT5G05440.1 )
(BLAST)

001: MRSPVQLQHG SDATNGFHTL QPHDQTDGPI KRVCLTRGMH VPEHVAMHHT HDVGPDQCCS SVVQMIHAPP ESVWALVRRF DNPKVYKNFI RQCRIVQGDG
101: LHVGDLREVM VVSGLPAVSS TERLEILDEE RHVISFSVVG GDHRLKNYRS VTTLHASDDE GTVVVESYIV DVPPGNTEEE TLSFVDTIVR CNLQSLARST
201: NRQ

Arabidopsis Description

PYL5Abscisic acid receptor PYL5 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLB1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.