Factsheet for GSMUA_Achr4P15170_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr11P...
GSMUA_Achr3P26270_001
GSMUA_Achr5P29000_001
GSMUA_Achr6P15180_001
GSMUA_Achr7P24000_001
GSMUA_Achr8P05700_001
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G45860.1	GSMUA_Achr3P26270_001	AT1G72770.1	19407142
AT5G45860.1	GSMUA_Achr7P24000_001	AT1G72770.1	19407142
AT5G45860.1	GSMUA_Achr8P05700_001	AT1G72770.1	19407142
AT5G45870.1	GSMUA_Achr3P26270_001	AT1G72770.1	19407142
AT5G45870.1	GSMUA_Achr7P24000_001	AT1G72770.1	19407142
AT5G45870.1	GSMUA_Achr8P05700_001	AT1G72770.1	19407142
AT5G45870.1	GSMUA_Achr11P...	AT3G11410.1	19407142
AT5G45870.1	GSMUA_Achr5P29000_001	AT3G11410.1	19407142
AT5G45870.1	GSMUA_Achr6P15180_001	AT3G11410.1	19407142
AT5G45870.1	GSMUA_AchrUn_...	AT3G11410.1	19407142

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P10630_001	Banana	mitochondrion	50.4	78.26
AT5G45870.1	Thale cress	cytosol	38.4	60.38
CDY68675	Canola	cytosol	38.4	59.26
CDY58053	Canola	cytosol	38.4	59.26
AT5G45860.1	Thale cress	cytosol	37.2	57.76
KRH11022	Soybean	cytosol	42.0	56.76
Bra025048.1-P	Field mustard	cytosol	38.0	55.88
KRH21267	Soybean	cytosol	41.2	55.68
GSMUA_Achr6P32790_001	Banana	cytosol	43.2	51.18
AT4G18620.1	Thale cress	cytosol	33.2	50.61
CDY58019	Canola	cytosol	33.6	50.6
CDX78879	Canola	cytosol	33.6	50.6
CDX99450	Canola	cytosol	33.6	50.6
GSMUA_Achr9P04600_001	Banana	cytosol	28.8	50.35
GSMUA_AchrUn_...	Banana	plastid	31.6	50.0
Bra013334.1-P	Field mustard	cytosol	32.8	49.4
GSMUA_Achr10P...	Banana	cytosol	36.0	48.39
GSMUA_Achr5P29490_001	Banana	plastid	31.2	48.15
GSMUA_Achr11P...	Banana	cytosol, plastid	30.4	48.1
GSMUA_Achr7P09320_001	Banana	cytosol	35.6	47.85
GSMUA_AchrUn_...	Banana	cytosol	35.6	47.85
GSMUA_Achr9P17980_001	Banana	cytosol	28.4	47.65
GSMUA_Achr2P19970_001	Banana	cytosol	34.8	46.77
GSMUA_Achr10P...	Banana	cytosol	34.4	46.24
GSMUA_Achr6P00980_001	Banana	cytosol	36.0	46.15
GSMUA_Achr4P08490_001	Banana	cytosol	36.4	45.73
GSMUA_Achr10P...	Banana	cytosol	36.0	45.69
GSMUA_Achr4P19170_001	Banana	cytosol	34.0	43.81
GSMUA_Achr8P14780_001	Banana	cytosol	36.0	43.69
GSMUA_Achr8P21220_001	Banana	cytosol	29.6	43.53
PGSC0003DMT400026521	Potato	cytosol	33.2	43.46
GSMUA_Achr4P15670_001	Banana	cytosol	32.0	42.78
GSMUA_Achr8P19910_001	Banana	mitochondrion	35.2	42.11
Solyc02g076770.1.1	Tomato	cytosol	36.0	41.28
GSMUA_Achr3P03480_001	Banana	cytosol	34.0	41.26
GSMUA_Achr10P...	Banana	cytosol, plastid	31.2	39.39
GSMUA_Achr2P15420_001	Banana	cytosol, mitochondrion, nucleus, plastid	35.6	39.04

Protein Annotations

EnsemblPlants:GSMUA_Achr4P15170_001	EnsemblPlants:GSMUA_Achr4T15170_001	EnsemblPlantsGene:GSMUA_Achr4G15170_001	Gene3D:3.30.530.20	InterPro:IPR023393	InterPro:Polyketide_cyclase/dehydratase
InterPro:START-like_dom_sf	PANTHER:PTHR31213	PANTHER:PTHR31213:SF3	PFAM:PF10604	SEG:seg	SUPFAM:SSF55961
UniParc:UPI000295E154	UniProt:M0SP32	MapMan:11.1.2.1.1.1	:	:	:

Description

bet v I allergen family protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr4G15170_001]

Coordinates

chr4:+:11420681..11425187

Molecular Weight (calculated)

27320.1 Da

IEP (calculated)

6.502

GRAVY (calculated)

-0.284

Length

250 amino acids

Sequence
(BLAST)

001: MISQFLAALV QEINSNLQRL NDRLYHLLHQ RITCSIEHKS FELIHNSISQ RLSEFSVPNL SCSLEPKLAR NSDPHPTCPA TQEVLRRYHS RHKGPGQCGS
101: VNVQYVSAPL PTVWSLVRRF DRPQDYKKFV KDCELSAGDG GVGSVREVTV VSGLPAGTST ERLDTLDDDR HVISFSVVGG DHRLSNYQST TTLHVSGGGT
201: GTVVVESYVV DVPPGNTAED TCVFADTIIR CNLRSLASIS EEMAGSPADG

Best Arabidopsis Sequence Match ( AT2G38310.1 )
(BLAST)

001: MLAVHRPSSA VSDGDSVQIP MMIASFQKRF PSLSRDSTAA RFHTHEVGPN QCCSAVIQEI SAPISTVWSV VRRFDNPQAY KHFLKSCSVI GGDGDNVGSL
101: RQVHVVSGLP AASSTERLDI LDDERHVISF SVVGGDHRLS NYRSVTTLHP SPISGTVVVE SYVVDVPPGN TKEETCDFVD VIVRCNLQSL AKIAENTAAE
201: SKKKMSL

Arabidopsis Description

PYL4Abscisic acid receptor PYL4 [Source:UniProtKB/Swiss-Prot;Acc:O80920]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.