Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400021210 | Potato | cytosol, nucleus, peroxisome | 16.58 | 72.22 |
| Solyc08g062640.2.1 | Tomato | cytosol | 22.96 | 67.16 |
| HORVU7Hr1G029040.1 | Barley | cytosol, peroxisome | 48.72 | 65.19 |
| Os01t0583100-01 | Rice | cytosol | 60.71 | 60.1 |
| GSMUA_Achr8P05700_001 | Banana | cytosol, peroxisome, plasma membrane | 64.8 | 58.26 |
| CDX96761 | Canola | cytosol | 50.26 | 56.29 |
| Zm00001d011202_P002 | Maize | cytosol, peroxisome, plastid | 62.24 | 55.71 |
| CDX83901 | Canola | cytosol | 49.49 | 55.43 |
| TraesCS1D01G449700.1 | Wheat | cytosol | 57.65 | 55.12 |
| TraesCS1A01G441200.1 | Wheat | cytosol | 57.91 | 55.1 |
| Zm00001d009747_P001 | Maize | cytosol | 58.93 | 54.61 |
| Bra016595.1-P | Field mustard | cytosol | 56.38 | 53.9 |
| Zm00001d039163_P002 | Maize | cytosol | 58.67 | 53.61 |
| HORVU1Hr1G094840.9 | Barley | extracellular, mitochondrion | 57.14 | 53.59 |
| KXG22681 | Sorghum | cytosol | 58.42 | 53.5 |
| TraesCS3D01G212100.1 | Wheat | peroxisome, plasma membrane, vacuole | 64.8 | 53.36 |
| EES00964 | Sorghum | peroxisome, plasma membrane, vacuole | 65.56 | 53.32 |
| HORVU3Hr1G050340.1 | Barley | plasma membrane, vacuole | 64.8 | 53.25 |
| TraesCS3B01G240000.1 | Wheat | peroxisome, plasma membrane, vacuole | 64.8 | 53.03 |
| GSMUA_Achr3P32040_001 | Banana | cytosol, peroxisome, plastid | 27.3 | 52.97 |
| TraesCS3A01G209200.1 | Wheat | peroxisome, plasma membrane, vacuole | 64.54 | 52.82 |
| Os05t0592800-02 | Rice | endoplasmic reticulum, vacuole | 59.69 | 52.58 |
| Zm00001d044301_P001 | Maize | cytosol, nucleus | 64.8 | 52.48 |
| TraesCS1B01G475700.1 | Wheat | cytosol | 58.16 | 51.24 |
| GSMUA_Achr3P26270_001 | Banana | cytosol, peroxisome, plastid | 63.01 | 49.8 |
| GSMUA_Achr2P19990_001 | Banana | cytosol | 28.57 | 47.46 |
| CDX72943 | Canola | cytosol, peroxisome, plastid | 56.89 | 46.95 |
| VIT_09s0002g01850.t01 | Wine grape | cytosol, peroxisome, plastid | 65.05 | 46.53 |
| VIT_04s0008g01420.t01 | Wine grape | cytosol | 65.31 | 46.46 |
| PGSC0003DMT400006608 | Potato | plastid | 64.54 | 46.42 |
| GSMUA_Achr11P... | Banana | cytosol | 29.85 | 46.25 |
| CDY26234 | Canola | cytosol | 58.16 | 45.97 |
| GSMUA_AchrUn_... | Banana | cytosol | 33.16 | 45.94 |
| CDX96432 | Canola | cytosol, peroxisome, plastid | 56.63 | 45.87 |
| Bra016034.1-P | Field mustard | cytosol, peroxisome, plastid | 56.63 | 45.87 |
| PGSC0003DMT400075333 | Potato | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 61.99 | 45.34 |
| Solyc12g096020.1.1 | Tomato | cytosol, nucleus, plastid | 58.42 | 45.08 |
| AT1G17550.1 | Thale cress | cytosol | 58.67 | 45.01 |
| CDY48313 | Canola | cytosol | 57.4 | 44.91 |
| KRH61549 | Soybean | cytosol | 62.24 | 44.85 |
| KRH52222 | Soybean | cytosol | 62.24 | 44.85 |
| Bra025964.1-P | Field mustard | cytosol | 57.91 | 44.69 |
| KRH05300 | Soybean | cytosol | 63.52 | 44.62 |
| AT1G72770.1 | Thale cress | cytosol | 57.65 | 44.23 |
| KRH15739 | Soybean | cytosol | 62.76 | 44.17 |
| GSMUA_Achr2P09370_001 | Banana | cytosol | 36.48 | 44.14 |
| GSMUA_Achr8P14370_001 | Banana | cytosol | 32.65 | 43.54 |
| GSMUA_Achr8P04220_001 | Banana | cytosol, nucleus, peroxisome | 35.97 | 41.72 |
| GSMUA_Achr5P29000_001 | Banana | cytosol | 38.52 | 39.53 |
| GSMUA_Achr11P... | Banana | cytosol | 39.54 | 39.24 |
| GSMUA_Achr10P... | Banana | plastid | 35.71 | 37.84 |
| GSMUA_Achr6P15180_001 | Banana | cytosol | 35.71 | 37.84 |
| Solyc08g062650.2.1 | Tomato | extracellular | 41.07 | 34.33 |
| GSMUA_Achr11P... | Banana | cytosol | 34.18 | 33.09 |
| GSMUA_Achr2P19980_001 | Banana | vacuole | 4.34 | 31.48 |
| GSMUA_Achr2P08890_001 | Banana | mitochondrion | 25.51 | 9.27 |
Protein Annotations
| KEGG:04658+3.1.3.16 | KEGG:04660+3.1.3.16 | MapMan:11.1.2.1.1.2 | MapMan:18.4.24.2.1 | Gene3D:3.60.40.10 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004721 | GO:GO:0004722 | GO:GO:0005488 | GO:GO:0006464 | GO:GO:0006470 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0043169 |
| GO:GO:0046872 | EnsemblPlantsGene:GSMUA_Achr7G24000_001 | EnsemblPlants:GSMUA_Achr7P24000_001 | EnsemblPlants:GSMUA_Achr7T24000_001 | InterPro:IPR001932 | InterPro:IPR036457 |
| UniProt:M0TK86 | PFAM:PF00481 | InterPro:PP2C | InterPro:PP2C_BS | InterPro:PPM-type_dom_sf | InterPro:PPM-type_phosphatase_dom |
| ScanProsite:PS01032 | PFscan:PS51746 | PANTHER:PTHR13832 | PANTHER:PTHR13832:SF374 | SMART:SM00331 | SMART:SM00332 |
| SUPFAM:SSF81606 | UniParc:UPI000295692B | SEG:seg | : | : | : |
Description
Probable protein phosphatase 2C 6 [Source:GMGC_GENE;Acc:GSMUA_Achr7G24000_001]
Coordinates
chr7:-:26035997..26041577
Molecular Weight (calculated)
43554.9 Da
IEP (calculated)
5.632
GRAVY (calculated)
-0.205
Length
392 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEMPPAVAL SFRTANSTCD NSMEIACLKL ITETAGLLPN PMDAASTGLS PELEQSEVLA TQEDQQSQAS SSSSKRSVFL VDYLPFWGQV SICGRRPEME
101: DAVVAVPYFY EIPLWLLIGN QDIDGLDSSL IRLPAHFFGV YDGHGGSQVA DYCRERIHHV LIEQLRNCAR DLRSNTCDDW KKQWERAFIN CFQQVDDEVG
201: GKTVGSTAVV AVICSSHIII ANCGDSRAVL CRGKQPVPLS VDHKPNREDE YARIEAQGGK VIHWNGYRVF GVLAMSRSIG DHYLKPWIIP VPEVTIVPRC
301: REDECLILAS DGLWDVMSNE EVCDIARRRI LLWHKKNGIV SSPVNHRGEE ADPAAQAAAD FLSKLAIQKG SKDNITVIVV DLKAQRKFKT KS
101: DAVVAVPYFY EIPLWLLIGN QDIDGLDSSL IRLPAHFFGV YDGHGGSQVA DYCRERIHHV LIEQLRNCAR DLRSNTCDDW KKQWERAFIN CFQQVDDEVG
201: GKTVGSTAVV AVICSSHIII ANCGDSRAVL CRGKQPVPLS VDHKPNREDE YARIEAQGGK VIHWNGYRVF GVLAMSRSIG DHYLKPWIIP VPEVTIVPRC
301: REDECLILAS DGLWDVMSNE EVCDIARRRI LLWHKKNGIV SSPVNHRGEE ADPAAQAAAD FLSKLAIQKG SKDNITVIVV DLKAQRKFKT KS
001: MEEISPAVAL TLGLANTMCD SGISSTFDIS ELENVTDAAD MLCNQKRQRY SNGVVDCIMG SVSEEKTLSE VRSLSSDFSV TVQESEEDEP LVSDATIISE
101: GLIVVDARSE ISLPDTVETD NGRVLATAII LNETTIEQVP TAEVLIASLN HDVNMEVATS EVVIRLPEEN PNVARGSRSV YELECIPLWG TISICGGRSE
201: MEDAVRALPH FLKIPIKMLM GDHEGMSPSL PYLTSHFFGV YDGHGGAQVA DYCHDRIHSA LAEEIERIKE ELCRRNTGEG RQVQWEKVFV DCYLKVDDEV
301: KGKINRPVVG SSDRMVLEAV SPETVGSTAV VALVCSSHII VSNCGDSRAV LLRGKDSMPL SVDHKPDRED EYARIEKAGG KVIQWQGARV SGVLAMSRSI
401: GDQYLEPFVI PDPEVTFMPR AREDECLILA SDGLWDVMSN QEACDFARRR ILAWHKKNGA LPLAERGVGE DQACQAAAEY LSKLAIQMGS KDNISIIVID
501: LKAQRKFKTR S
101: GLIVVDARSE ISLPDTVETD NGRVLATAII LNETTIEQVP TAEVLIASLN HDVNMEVATS EVVIRLPEEN PNVARGSRSV YELECIPLWG TISICGGRSE
201: MEDAVRALPH FLKIPIKMLM GDHEGMSPSL PYLTSHFFGV YDGHGGAQVA DYCHDRIHSA LAEEIERIKE ELCRRNTGEG RQVQWEKVFV DCYLKVDDEV
301: KGKINRPVVG SSDRMVLEAV SPETVGSTAV VALVCSSHII VSNCGDSRAV LLRGKDSMPL SVDHKPDRED EYARIEKAGG KVIQWQGARV SGVLAMSRSI
401: GDQYLEPFVI PDPEVTFMPR AREDECLILA SDGLWDVMSN QEACDFARRR ILAWHKKNGA LPLAERGVGE DQACQAAAEY LSKLAIQMGS KDNISIIVID
501: LKAQRKFKTR S
Arabidopsis Description
HAB2Protein phosphatase 2C 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNP9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.