Skip to main content
crop-pal logo
Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus, cytosol

Predictor Summary:
  • plastid 1
  • extracellular 3
  • endoplasmic reticulum 3
  • vacuole 4
  • plasma membrane 4
  • golgi 3
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, nucleus
Any Predictor:peroxisome, plastid, secretory
ChloroP:plastid
iPSORT:secretory
MultiLoc:peroxisome
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:plasma membrane
cytosol: 29344831
nucleus: 29344831
gfp PMID: 29344831 doi
YG Wang, FL Fu, HQ Yu, T Hu, YY Zhang, Y Tao, JK Zhu, Y Zhao, WC Li
Maize Research Institute, Sichuan Agricultural University, Chengdu, 611130, Sichuan, China., Maize Research Institute, Sichuan Agricultural University, Chengdu, 611130, Sichuan, China. aumdyms@sicau.edu.cn., Shanghai Center for Plant Stress Biology, and CAS Center for Excellence in Molecular Plant Sciences, Chinese Academy of Sciences, Shanghai, 200032, China., Shanghai Center for Plant Stress Biology, and CAS Center for Excellence in Molecular Plant Sciences, Chinese Academy of Sciences, Shanghai, 200032, China. zhaoyang@sibs.ac.cn.
PPI

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G72770.1 Zm00001d002533_P001 AT1G01360.1 19407142
AT1G72770.1 Zm00001d010445_P001 AT1G01360.1 19407142
AT1G72770.1 Zm00001d016105_P001 AT1G01360.1 19407142
AT1G72770.1 Zm00001d037719_P001 AT1G01360.1 19407142
AT1G72770.1 Zm00001d053396_P001 AT1G01360.1 19407142
AT1G72770.1 Zm00001d002533_P001 AT1G01360.1 19407143
AT1G72770.1 Zm00001d010445_P001 AT1G01360.1 19407143
AT1G72770.1 Zm00001d016105_P001 AT1G01360.1 19407143
AT1G72770.1 Zm00001d037719_P001 AT1G01360.1 19407143
AT1G72770.1 Zm00001d053396_P001 AT1G01360.1 19407143
AT1G72770.1 Zm00001d016294_P001 AT1G73000.1 19407142
AT1G72770.1 Zm00001d016294_P001 AT2G26040.1 19407142
AT1G72770.1 Zm00001d007849_P002 AT2G30880.1 21798944
AT1G72770.1 Zm00001d013589_P006 AT2G30880.1 21798944
AT1G72770.1 Zm00001d018772_P001 AT2G30880.1 21798944
AT1G72770.1 Zm00001d033157_P001 AT2G30880.1 21798944
AT1G72770.1 Zm00001d034954_P001 AT2G30880.1 21798944
AT1G72770.1 Zm00001d053687_P001 AT2G33610.1 19033529
AT1G72770.1 Zm00001d012475_P001 AT2G38310.1 19407142
AT1G72770.1 Zm00001d028793_P001 AT2G38310.1 19407142
AT1G72770.1 Zm00001d038436_P001 AT2G38310.1 19407142
AT1G72770.1 Zm00001d043014_P001 AT2G38310.1 19407142
AT1G72770.1 Zm00001d047705_P001 AT2G38310.1 19407142
AT1G72770.1 Zm00001d012475_P001 AT2G38310.1 19624469
AT1G72770.1 Zm00001d028793_P001 AT2G38310.1 19624469
AT1G72770.1 Zm00001d038436_P001 AT2G38310.1 19624469
AT1G72770.1 Zm00001d043014_P001 AT2G38310.1 19624469
AT1G72770.1 Zm00001d047705_P001 AT2G38310.1 19624469
AT1G72770.1 Zm00001d012475_P001 AT2G40330.1 19407142
AT1G72770.1 Zm00001d028793_P001 AT2G40330.1 19407142
AT1G72770.1 Zm00001d038436_P001 AT2G40330.1 19407142
AT1G72770.1 Zm00001d043014_P001 AT2G40330.1 19407142
AT1G72770.1 Zm00001d047705_P001 AT2G40330.1 19407142
AT1G72770.1 Zm00001d012475_P001 AT2G40330.1 19624469
AT1G72770.1 Zm00001d028793_P001 AT2G40330.1 19624469
AT1G72770.1 Zm00001d038436_P001 AT2G40330.1 19624469
AT1G72770.1 Zm00001d043014_P001 AT2G40330.1 19624469
AT1G72770.1 Zm00001d047705_P001 AT2G40330.1 19624469
AT1G72770.1 Zm00001d012475_P001 AT2G40330.1 21847091
AT1G72770.1 Zm00001d028793_P001 AT2G40330.1 21847091
AT1G72770.1 Zm00001d038436_P001 AT2G40330.1 21847091
AT1G72770.1 Zm00001d043014_P001 AT2G40330.1 21847091
AT1G72770.1 Zm00001d047705_P001 AT2G40330.1 21847091
AT1G72770.1 Zm00001d002533_P001 AT4G01026.1 19407142
AT1G72770.1 Zm00001d010445_P001 AT4G01026.1 19407142
AT1G72770.1 Zm00001d016105_P001 AT4G01026.1 19407142
AT1G72770.1 Zm00001d037719_P001 AT4G01026.1 19407142
AT1G72770.1 Zm00001d053396_P001 AT4G01026.1 19407142
AT1G72770.1 Zm00001d030045_P001 AT4G17870.1 19407142
AT1G72770.1 Zm00001d047037_P001 AT4G17870.1 19407142
AT1G72770.1 Zm00001d030045_P001 AT4G17870.1 19624469
AT1G72770.1 Zm00001d047037_P001 AT4G17870.1 19624469
AT1G72770.1 Zm00001d030045_P001 AT4G17870.1 21847091
AT1G72770.1 Zm00001d047037_P001 AT4G17870.1 21847091
AT1G72770.1 Zm00001d002533_P001 AT4G27920.1 19407142
AT1G72770.1 Zm00001d010445_P001 AT4G27920.1 19407142
AT1G72770.1 Zm00001d016105_P001 AT4G27920.1 19407142
AT1G72770.1 Zm00001d037719_P001 AT4G27920.1 19407142
AT1G72770.1 Zm00001d053396_P001 AT4G27920.1 19407142
AT1G72770.1 Zm00001d012475_P001 AT5G05440.1 19407142
AT1G72770.1 Zm00001d028793_P001 AT5G05440.1 19407142
AT1G72770.1 Zm00001d038436_P001 AT5G05440.1 19407142
AT1G72770.1 Zm00001d043014_P001 AT5G05440.1 19407142
AT1G72770.1 Zm00001d047705_P001 AT5G05440.1 19407142
AT1G72770.1 Zm00001d012475_P001 AT5G05440.1 19624469
AT1G72770.1 Zm00001d028793_P001 AT5G05440.1 19624469
AT1G72770.1 Zm00001d038436_P001 AT5G05440.1 19624469
AT1G72770.1 Zm00001d043014_P001 AT5G05440.1 19624469
AT1G72770.1 Zm00001d047705_P001 AT5G05440.1 19624469
AT1G72770.1 Zm00001d012475_P001 AT5G05440.1 21847091
AT1G72770.1 Zm00001d028793_P001 AT5G05440.1 21847091
AT1G72770.1 Zm00001d038436_P001 AT5G05440.1 21847091
AT1G72770.1 Zm00001d043014_P001 AT5G05440.1 21847091
AT1G72770.1 Zm00001d047705_P001 AT5G05440.1 21847091
AT1G72770.1 Zm00001d030045_P001 AT5G46790.1 19407142
AT1G72770.1 Zm00001d047037_P001 AT5G46790.1 19407142
AT1G72770.1 Zm00001d043730_P001 AT5G66400.1 19033529
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d011202_P002 Maize cytosol, peroxisome, plastid 84.09 92.92
EES00964 Sorghum peroxisome, plasma membrane, vacuole 92.15 92.53
Os01t0583100-01 Rice cytosol 69.21 84.6
HORVU3Hr1G050340.1 Barley plasma membrane, vacuole 80.37 81.55
TraesCS3D01G212100.1 Wheat peroxisome, plasma membrane, vacuole 80.17 81.51
TraesCS3B01G240000.1 Wheat peroxisome, plasma membrane, vacuole 80.58 81.42
TraesCS3A01G209200.1 Wheat peroxisome, plasma membrane, vacuole 80.37 81.21
PGSC0003DMT400021210 Potato cytosol, nucleus, peroxisome 13.84 74.44
HORVU7Hr1G029040.1 Barley cytosol, peroxisome 43.59 72.01
Solyc08g062640.2.1 Tomato cytosol 19.42 70.15
Zm00001d009747_P001 Maize cytosol 60.54 69.27
Zm00001d039163_P002 Maize cytosol 60.33 68.07
GSMUA_Achr7P24000_001 Banana cytosol 52.48 64.8
GSMUA_Achr8P05700_001 Banana cytosol, peroxisome, plasma membrane 54.34 60.32
Zm00001d038846_P001 Maize cytosol, nucleus 43.8 57.3
CDX96761 Canola cytosol 40.5 56.0
CDX83901 Canola cytosol 40.5 56.0
Bra016595.1-P Field mustard cytosol 46.28 54.63
GSMUA_Achr3P26270_001 Banana cytosol, peroxisome, plastid 55.79 54.44
Zm00001d011132_P001 Maize cytosol, nucleus 16.32 53.02
CDX72943 Canola cytosol, peroxisome, plastid 47.93 48.84
Zm00001d011131_P001 Maize cytosol 28.31 48.58
Bra016034.1-P Field mustard cytosol, peroxisome, plastid 48.55 48.55
CDX96432 Canola cytosol, peroxisome, plastid 48.55 48.55
Solyc12g096020.1.1 Tomato cytosol, nucleus, plastid 50.83 48.43
VIT_04s0008g01420.t01 Wine grape cytosol 54.34 47.73
KRH61549 Soybean cytosol 53.31 47.43
KRH52222 Soybean cytosol 53.1 47.24
PGSC0003DMT400075333 Potato cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole 52.07 47.01
CDY26234 Canola cytosol 47.93 46.77
AT1G72770.1 Thale cress cytosol 49.17 46.58
AT1G17550.1 Thale cress cytosol 48.97 46.38
Bra025964.1-P Field mustard cytosol 48.35 46.06
KRH05300 Soybean cytosol 52.48 45.52
CDY48313 Canola cytosol 46.9 45.31
KRH15739 Soybean cytosol 52.07 45.24
VIT_09s0002g01850.t01 Wine grape cytosol, peroxisome, plastid 50.62 44.71
PGSC0003DMT400006608 Potato plastid 50.21 44.59
Zm00001d009626_P001 Maize nucleus 32.02 41.33
Zm00001d005609_P001 Maize cytosol, mitochondrion, nucleus, plastid 29.34 40.57
Zm00001d020100_P001 Maize mitochondrion, nucleus, peroxisome, plastid 28.93 39.11
Zm00001d011495_P001 Maize cytosol 31.61 38.83
Solyc08g062650.2.1 Tomato extracellular 36.98 38.17
Zm00001d044015_P001 Maize cytosol 31.41 37.07
Zm00001d042886_P001 Maize nucleus 31.2 37.01
Zm00001d028574_P001 Maize nucleus 29.75 36.36
Zm00001d012401_P001 Maize cytosol, mitochondrion, nucleus, plastid 30.58 35.84
Zm00001d025055_P001 Maize cytosol 28.72 29.96
Zm00001d004357_P001 Maize nucleus 26.03 23.16
Zm00001d007529_P001 Maize nucleus 16.53 15.69
Zm00001d007528_P001 Maize extracellular, vacuole 6.2 11.81
Zm00001d007558_P001 Maize cytosol 0.62 2.65
Zm00001d007530_P001 Maize cytosol 0.83 2.3
Zm00001d007532_P001 Maize cytosol 0.41 2.27
Zm00001d007533_P001 Maize extracellular 0.41 1.89
Zm00001d007554_P001 Maize cytosol 0.62 1.24
Protein Annotations
KEGG:04658+3.1.3.16KEGG:04660+3.1.3.16MapMan:11.1.2.1.1.2MapMan:18.4.24.2.1Gene3D:3.60.40.10UniProt:A0A060D3D9
GO:GO:0003674GO:GO:0003824GO:GO:0004721GO:GO:0004722GO:GO:0005488GO:GO:0006464
GO:GO:0006470GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016787GO:GO:0019538
GO:GO:0043169GO:GO:0046872InterPro:IPR001932InterPro:IPR036457EMBL:KJ728526ProteinID:ONM40809.1
PFAM:PF00481InterPro:PP2CInterPro:PP2C_BSInterPro:PPM-type_dom_sfInterPro:PPM-type_phosphatase_domScanProsite:PS01032
PFscan:PS51746PANTHER:PTHR13832PANTHER:PTHR13832:SF374SMART:SM00332SUPFAM:SSF81606UniParc:UPI0001B723C2
EnsemblPlantsGene:Zm00001d044301EnsemblPlants:Zm00001d044301_P001EnsemblPlants:Zm00001d044301_T001SEG:seg::
Description
protein phosphatase homolog13Protein phosphatase 2C ABI2
Coordinates
chr3:+:224583950..224589477
Molecular Weight (calculated)
50699.3 Da
IEP (calculated)
4.485
GRAVY (calculated)
0.116
Length
484 amino acids
Sequence
(BLAST)
001: MEDVVAVVAS LSAPPAPAFS PAAAGLTLIA AAVADPIAAV VVGAMEGVSV PVTVPPVRTA SAVDDDALAP GEEGGDASLA GSPCSVVSDC SSVASADFEG
101: VGLCFFGAAA GAEGGPMVLE DSTASAATVE AEARVAAGGR SVFAVDCVPL WGYTSICGRR PEMEDAVAIV PRFFDLPLWL LTGNAMVDGL DPMTFRLPAH
201: FFGVYDGHGG AQVANYCRER LHVALLEQLS RIEETACAAN LGDMEFKKQW EKVFVDSYAR VDDEVGGNTM RGGGEEAGTS DAAMTLVPEP VAPETVGSTA
301: VVAVICSSHI IVSNCGDSRA VLCRGKQPVP LSVDHKPNRE DEYARIEAEG GKVIQWNGYR VFGVLAMSRS IGDRYLKPWI IPVPEVTIVP RAKDDECLIL
401: ASDGLWDVMS NEEVCEIARK RILLWHKKNS TSSSSAPRVG DSADSAAQAA AECLSKLALQ KGSKDNITVV VVDLKAQRKF KSKT
Best Arabidopsis Sequence Match ( AT1G17550.1 )
(BLAST)
001: MEEISPAVAL TLGLANTMCD SGISSTFDIS ELENVTDAAD MLCNQKRQRY SNGVVDCIMG SVSEEKTLSE VRSLSSDFSV TVQESEEDEP LVSDATIISE
101: GLIVVDARSE ISLPDTVETD NGRVLATAII LNETTIEQVP TAEVLIASLN HDVNMEVATS EVVIRLPEEN PNVARGSRSV YELECIPLWG TISICGGRSE
201: MEDAVRALPH FLKIPIKMLM GDHEGMSPSL PYLTSHFFGV YDGHGGAQVA DYCHDRIHSA LAEEIERIKE ELCRRNTGEG RQVQWEKVFV DCYLKVDDEV
301: KGKINRPVVG SSDRMVLEAV SPETVGSTAV VALVCSSHII VSNCGDSRAV LLRGKDSMPL SVDHKPDRED EYARIEKAGG KVIQWQGARV SGVLAMSRSI
401: GDQYLEPFVI PDPEVTFMPR AREDECLILA SDGLWDVMSN QEACDFARRR ILAWHKKNGA LPLAERGVGE DQACQAAAEY LSKLAIQMGS KDNISIIVID
501: LKAQRKFKTR S
Arabidopsis Description
HAB2Protein phosphatase 2C 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNP9]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.