Subcellular Localization
min:
: max
Winner_takes_all: nucleus, cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 3
- endoplasmic reticulum 3
- vacuole 4
- plasma membrane 4
- golgi 3
- peroxisome 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
cytosol:
29344831
nucleus: 29344831 |
gfp PMID:
29344831
doi
Maize Research Institute, Sichuan Agricultural University, Chengdu, 611130, Sichuan, China., Maize Research Institute, Sichuan Agricultural University, Chengdu, 611130, Sichuan, China. aumdyms@sicau.edu.cn., Shanghai Center for Plant Stress Biology, and CAS Center for Excellence in Molecular Plant Sciences, Chinese Academy of Sciences, Shanghai, 200032, China., Shanghai Center for Plant Stress Biology, and CAS Center for Excellence in Molecular Plant Sciences, Chinese Academy of Sciences, Shanghai, 200032, China. zhaoyang@sibs.ac.cn.
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Zm00001d011202_P002 | Maize | cytosol, peroxisome, plastid | 84.09 | 92.92 |
EES00964 | Sorghum | peroxisome, plasma membrane, vacuole | 92.15 | 92.53 |
Os01t0583100-01 | Rice | cytosol | 69.21 | 84.6 |
HORVU3Hr1G050340.1 | Barley | plasma membrane, vacuole | 80.37 | 81.55 |
TraesCS3D01G212100.1 | Wheat | peroxisome, plasma membrane, vacuole | 80.17 | 81.51 |
TraesCS3B01G240000.1 | Wheat | peroxisome, plasma membrane, vacuole | 80.58 | 81.42 |
TraesCS3A01G209200.1 | Wheat | peroxisome, plasma membrane, vacuole | 80.37 | 81.21 |
PGSC0003DMT400021210 | Potato | cytosol, nucleus, peroxisome | 13.84 | 74.44 |
HORVU7Hr1G029040.1 | Barley | cytosol, peroxisome | 43.59 | 72.01 |
Solyc08g062640.2.1 | Tomato | cytosol | 19.42 | 70.15 |
Zm00001d009747_P001 | Maize | cytosol | 60.54 | 69.27 |
Zm00001d039163_P002 | Maize | cytosol | 60.33 | 68.07 |
GSMUA_Achr7P24000_001 | Banana | cytosol | 52.48 | 64.8 |
GSMUA_Achr8P05700_001 | Banana | cytosol, peroxisome, plasma membrane | 54.34 | 60.32 |
Zm00001d038846_P001 | Maize | cytosol, nucleus | 43.8 | 57.3 |
CDX96761 | Canola | cytosol | 40.5 | 56.0 |
CDX83901 | Canola | cytosol | 40.5 | 56.0 |
Bra016595.1-P | Field mustard | cytosol | 46.28 | 54.63 |
GSMUA_Achr3P26270_001 | Banana | cytosol, peroxisome, plastid | 55.79 | 54.44 |
Zm00001d011132_P001 | Maize | cytosol, nucleus | 16.32 | 53.02 |
CDX72943 | Canola | cytosol, peroxisome, plastid | 47.93 | 48.84 |
Zm00001d011131_P001 | Maize | cytosol | 28.31 | 48.58 |
Bra016034.1-P | Field mustard | cytosol, peroxisome, plastid | 48.55 | 48.55 |
CDX96432 | Canola | cytosol, peroxisome, plastid | 48.55 | 48.55 |
Solyc12g096020.1.1 | Tomato | cytosol, nucleus, plastid | 50.83 | 48.43 |
VIT_04s0008g01420.t01 | Wine grape | cytosol | 54.34 | 47.73 |
KRH61549 | Soybean | cytosol | 53.31 | 47.43 |
KRH52222 | Soybean | cytosol | 53.1 | 47.24 |
PGSC0003DMT400075333 | Potato | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 52.07 | 47.01 |
CDY26234 | Canola | cytosol | 47.93 | 46.77 |
AT1G72770.1 | Thale cress | cytosol | 49.17 | 46.58 |
AT1G17550.1 | Thale cress | cytosol | 48.97 | 46.38 |
Bra025964.1-P | Field mustard | cytosol | 48.35 | 46.06 |
KRH05300 | Soybean | cytosol | 52.48 | 45.52 |
CDY48313 | Canola | cytosol | 46.9 | 45.31 |
KRH15739 | Soybean | cytosol | 52.07 | 45.24 |
VIT_09s0002g01850.t01 | Wine grape | cytosol, peroxisome, plastid | 50.62 | 44.71 |
PGSC0003DMT400006608 | Potato | plastid | 50.21 | 44.59 |
Zm00001d009626_P001 | Maize | nucleus | 32.02 | 41.33 |
Zm00001d005609_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 29.34 | 40.57 |
Zm00001d020100_P001 | Maize | mitochondrion, nucleus, peroxisome, plastid | 28.93 | 39.11 |
Zm00001d011495_P001 | Maize | cytosol | 31.61 | 38.83 |
Solyc08g062650.2.1 | Tomato | extracellular | 36.98 | 38.17 |
Zm00001d044015_P001 | Maize | cytosol | 31.41 | 37.07 |
Zm00001d042886_P001 | Maize | nucleus | 31.2 | 37.01 |
Zm00001d028574_P001 | Maize | nucleus | 29.75 | 36.36 |
Zm00001d012401_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 30.58 | 35.84 |
Zm00001d025055_P001 | Maize | cytosol | 28.72 | 29.96 |
Zm00001d004357_P001 | Maize | nucleus | 26.03 | 23.16 |
Zm00001d007529_P001 | Maize | nucleus | 16.53 | 15.69 |
Zm00001d007528_P001 | Maize | extracellular, vacuole | 6.2 | 11.81 |
Zm00001d007558_P001 | Maize | cytosol | 0.62 | 2.65 |
Zm00001d007530_P001 | Maize | cytosol | 0.83 | 2.3 |
Zm00001d007532_P001 | Maize | cytosol | 0.41 | 2.27 |
Zm00001d007533_P001 | Maize | extracellular | 0.41 | 1.89 |
Zm00001d007554_P001 | Maize | cytosol | 0.62 | 1.24 |
Protein Annotations
KEGG:04658+3.1.3.16 | KEGG:04660+3.1.3.16 | MapMan:11.1.2.1.1.2 | MapMan:18.4.24.2.1 | Gene3D:3.60.40.10 | UniProt:A0A060D3D9 |
GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004721 | GO:GO:0004722 | GO:GO:0005488 | GO:GO:0006464 |
GO:GO:0006470 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 |
GO:GO:0043169 | GO:GO:0046872 | InterPro:IPR001932 | InterPro:IPR036457 | EMBL:KJ728526 | ProteinID:ONM40809.1 |
PFAM:PF00481 | InterPro:PP2C | InterPro:PP2C_BS | InterPro:PPM-type_dom_sf | InterPro:PPM-type_phosphatase_dom | ScanProsite:PS01032 |
PFscan:PS51746 | PANTHER:PTHR13832 | PANTHER:PTHR13832:SF374 | SMART:SM00332 | SUPFAM:SSF81606 | UniParc:UPI0001B723C2 |
EnsemblPlantsGene:Zm00001d044301 | EnsemblPlants:Zm00001d044301_P001 | EnsemblPlants:Zm00001d044301_T001 | SEG:seg | : | : |
Description
protein phosphatase homolog13Protein phosphatase 2C ABI2
Coordinates
chr3:+:224583950..224589477
Molecular Weight (calculated)
50699.3 Da
IEP (calculated)
4.485
GRAVY (calculated)
0.116
Length
484 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDVVAVVAS LSAPPAPAFS PAAAGLTLIA AAVADPIAAV VVGAMEGVSV PVTVPPVRTA SAVDDDALAP GEEGGDASLA GSPCSVVSDC SSVASADFEG
101: VGLCFFGAAA GAEGGPMVLE DSTASAATVE AEARVAAGGR SVFAVDCVPL WGYTSICGRR PEMEDAVAIV PRFFDLPLWL LTGNAMVDGL DPMTFRLPAH
201: FFGVYDGHGG AQVANYCRER LHVALLEQLS RIEETACAAN LGDMEFKKQW EKVFVDSYAR VDDEVGGNTM RGGGEEAGTS DAAMTLVPEP VAPETVGSTA
301: VVAVICSSHI IVSNCGDSRA VLCRGKQPVP LSVDHKPNRE DEYARIEAEG GKVIQWNGYR VFGVLAMSRS IGDRYLKPWI IPVPEVTIVP RAKDDECLIL
401: ASDGLWDVMS NEEVCEIARK RILLWHKKNS TSSSSAPRVG DSADSAAQAA AECLSKLALQ KGSKDNITVV VVDLKAQRKF KSKT
101: VGLCFFGAAA GAEGGPMVLE DSTASAATVE AEARVAAGGR SVFAVDCVPL WGYTSICGRR PEMEDAVAIV PRFFDLPLWL LTGNAMVDGL DPMTFRLPAH
201: FFGVYDGHGG AQVANYCRER LHVALLEQLS RIEETACAAN LGDMEFKKQW EKVFVDSYAR VDDEVGGNTM RGGGEEAGTS DAAMTLVPEP VAPETVGSTA
301: VVAVICSSHI IVSNCGDSRA VLCRGKQPVP LSVDHKPNRE DEYARIEAEG GKVIQWNGYR VFGVLAMSRS IGDRYLKPWI IPVPEVTIVP RAKDDECLIL
401: ASDGLWDVMS NEEVCEIARK RILLWHKKNS TSSSSAPRVG DSADSAAQAA AECLSKLALQ KGSKDNITVV VVDLKAQRKF KSKT
001: MEEISPAVAL TLGLANTMCD SGISSTFDIS ELENVTDAAD MLCNQKRQRY SNGVVDCIMG SVSEEKTLSE VRSLSSDFSV TVQESEEDEP LVSDATIISE
101: GLIVVDARSE ISLPDTVETD NGRVLATAII LNETTIEQVP TAEVLIASLN HDVNMEVATS EVVIRLPEEN PNVARGSRSV YELECIPLWG TISICGGRSE
201: MEDAVRALPH FLKIPIKMLM GDHEGMSPSL PYLTSHFFGV YDGHGGAQVA DYCHDRIHSA LAEEIERIKE ELCRRNTGEG RQVQWEKVFV DCYLKVDDEV
301: KGKINRPVVG SSDRMVLEAV SPETVGSTAV VALVCSSHII VSNCGDSRAV LLRGKDSMPL SVDHKPDRED EYARIEKAGG KVIQWQGARV SGVLAMSRSI
401: GDQYLEPFVI PDPEVTFMPR AREDECLILA SDGLWDVMSN QEACDFARRR ILAWHKKNGA LPLAERGVGE DQACQAAAEY LSKLAIQMGS KDNISIIVID
501: LKAQRKFKTR S
101: GLIVVDARSE ISLPDTVETD NGRVLATAII LNETTIEQVP TAEVLIASLN HDVNMEVATS EVVIRLPEEN PNVARGSRSV YELECIPLWG TISICGGRSE
201: MEDAVRALPH FLKIPIKMLM GDHEGMSPSL PYLTSHFFGV YDGHGGAQVA DYCHDRIHSA LAEEIERIKE ELCRRNTGEG RQVQWEKVFV DCYLKVDDEV
301: KGKINRPVVG SSDRMVLEAV SPETVGSTAV VALVCSSHII VSNCGDSRAV LLRGKDSMPL SVDHKPDRED EYARIEKAGG KVIQWQGARV SGVLAMSRSI
401: GDQYLEPFVI PDPEVTFMPR AREDECLILA SDGLWDVMSN QEACDFARRR ILAWHKKNGA LPLAERGVGE DQACQAAAEY LSKLAIQMGS KDNISIIVID
501: LKAQRKFKTR S
Arabidopsis Description
HAB2Protein phosphatase 2C 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNP9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.