Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG33203 | Sorghum | nucleus | 60.17 | 68.27 |
| GSMUA_Achr4P11310_001 | Banana | nucleus | 23.73 | 58.33 |
| Solyc01g065820.1.1 | Tomato | nucleus | 18.22 | 55.13 |
| TraesCS3D01G255500.1 | Wheat | cytosol | 48.31 | 53.02 |
| TraesCS3B01G286600.1 | Wheat | cytosol | 46.19 | 50.23 |
| TraesCS3A01G254600.1 | Wheat | cytosol | 44.49 | 49.3 |
| AT3G50980.1 | Thale cress | cytosol | 26.27 | 48.44 |
| CDY54976 | Canola | cytosol | 28.81 | 47.22 |
| CDY18597 | Canola | cytosol | 28.81 | 47.22 |
| CDX81402 | Canola | cytosol | 28.81 | 47.22 |
| Bra037177.1-P | Field mustard | cytosol | 28.81 | 47.22 |
| PGSC0003DMT400009070 | Potato | cytosol | 30.93 | 46.5 |
| Bra036843.1-P | Field mustard | cytosol | 25.42 | 44.78 |
| CDX77969 | Canola | nucleus | 25.42 | 44.12 |
| CDX73764 | Canola | cytosol | 25.0 | 44.03 |
| VIT_04s0023g02480.t01 | Wine grape | cytosol | 24.15 | 43.85 |
| Os01t0702500-01 | Rice | cytosol, plastid | 34.75 | 43.62 |
| CDY65890 | Canola | cytosol | 30.51 | 38.1 |
| CDY55093 | Canola | cytosol | 29.66 | 36.84 |
| Bra031809.1-P | Field mustard | cytosol | 29.66 | 36.46 |
| AT5G66400.1 | Thale cress | cytosol | 27.97 | 35.48 |
Protein Annotations
| EMBL:EU976440 | EnsemblPlants:Zm00001d043730_P001 | EnsemblPlants:Zm00001d043730_T001 | EnsemblPlantsGene:Zm00001d043730 | EntrezGene:100279027 | GO:GO:0006950 |
| GO:GO:0008150 | GO:GO:0009415 | GO:GO:0009628 | InterPro:Dehydrin | InterPro:Dehydrin_CS | PANTHER:PTHR33346 |
| PFAM:PF00257 | ProteinID:ONM38913.1 | ScanProsite:PS00315 | ScanProsite:PS00823 | SEG:seg | UniParc:UPI000182FA57 |
| UniProt:B6UGS5 | MapMan:35.1 | : | : | : | : |
Description
Dehydrin Xero 1
Coordinates
chr3:-:208597979..208599185
Molecular Weight (calculated)
24811.5 Da
IEP (calculated)
6.460
GRAVY (calculated)
-0.893
Length
236 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEYQGEYGH PYPRVDQYGN PVPPVDQYGN PLPREPASGF GAIAPPYSAG DSAAGHVAAP VEYGADAKYP HDGTGSGGGG GVTAPTGVVA YSSGGVAPAE
101: TALASYEEGM VHLQPTGEEH TFGMASQLQP THGEEHTFGM ASQLQPTGEE HTTLGEKLRR SGSSSSSSED DEQGGRRKKS IKEKIKEKLP GTHKHEEQKA
201: GHVTTTTTGT HAAGTHEKKG FMEKIKEKLP GHHHAH
101: TALASYEEGM VHLQPTGEEH TFGMASQLQP THGEEHTFGM ASQLQPTGEE HTTLGEKLRR SGSSSSSSED DEQGGRRKKS IKEKIKEKLP GTHKHEEQKA
201: GHVTTTTTGT HAAGTHEKKG FMEKIKEKLP GHHHAH
001: MADLKDERGN PIYLTDAHGE PAQLMDEFGN AMHLTGVATT VPHLKESSYT GPHPITAPVT TTNTPHHAQP ISVSHDPLQD HDLRWFGTSS TEENGEGVGR
101: KTNITDETKS KLGVDKPSAA TVTGSGSGSV HEKKGFFKKI KEKLSGHHND L
101: KTNITDETKS KLGVDKPSAA TVTGSGSGSV HEKKGFFKKI KEKLSGHHND L
Arabidopsis Description
Dehydrin family protein [Source:UniProtKB/TrEMBL;Acc:Q9T022]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.