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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY18597 Canola cytosol 99.31 99.31
CDY54976 Canola cytosol 99.31 99.31
Bra037177.1-P Field mustard cytosol 98.61 98.61
CDY65890 Canola cytosol 97.22 74.07
CDY55093 Canola cytosol 94.44 71.58
AT5G66400.1 Thale cress cytosol 84.03 65.05
CDX77969 Canola nucleus 59.03 62.5
GSMUA_Achr4P11310_001 Banana nucleus 41.67 62.5
CDX73764 Canola cytosol 57.64 61.94
Solyc01g065820.1.1 Tomato nucleus 28.47 52.56
PGSC0003DMT400009070 Potato cytosol 53.47 49.04
VIT_04s0023g02480.t01 Wine grape cytosol 41.67 46.15
KXG33203 Sorghum nucleus 51.39 35.58
Os01t0702500-01 Rice cytosol, plastid 42.36 32.45
TraesCS3D01G255500.1 Wheat cytosol 46.53 31.16
TraesCS3B01G286600.1 Wheat cytosol 46.53 30.88
TraesCS3A01G254600.1 Wheat cytosol 43.75 29.58
Zm00001d043730_P001 Maize cytosol 47.22 28.81
Protein Annotations
EnsemblPlants:CDX81402EnsemblPlantsGene:GSBRNA2T00134984001GO:A0A078CXB7GO:GO:0006950GO:GO:0008150GO:GO:0009415
GO:GO:0009628InterPro:DehydrinInterPro:Dehydrin_CSPANTHER:PTHR33346PANTHER:PTHR33346:SF9PFAM:PF00257
ProteinID:CDX81402ProteinID:CDX81402.1ScanProsite:PS00315ScanProsite:PS00823SEG:segUniParc:UPI0004EF3CE1
MapMan:35.2:::::
Description
BnaC09g08130D
Coordinates
chrLK031824:-:1549704..1550725
Molecular Weight (calculated)
15027.3 Da
IEP (calculated)
8.850
GRAVY (calculated)
-1.347
Length
144 amino acids
Sequence
(BLAST)
001: MASYQNRPGA QATDEYGNPI QQLDEYGNPI GRGATGGGGG RHHGQEQLHK ESGGGGLGGM LHRSGSGSSS SSEDDGQGGR RKKKGITDKI KEKLPGHHDQ
101: SGQSQGMGMG TTTGYDEGGY GGERHEKKGM MEKIKEKLPG GGHH
Best Arabidopsis Sequence Match ( AT5G66400.1 )
(BLAST)
001: MASYQNRPGG QATDEYGNPI QQQYDEYGNP MGGGGYGTGG GGGATGGQGY GTGGQGYGSG GQGYGTGGQG YGTGTGTEGF GTGGGARHHG QEQLHKESGG
101: GLGGMLHRSG SGSSSSSEDD GQGGRRKKGI TQKIKEKLPG HHDQSGQAQA MGGMGSGYDA GGYGGEHHEK KGMMDKIKEK LPGGGR
Arabidopsis Description
RAB18RAB18 [Source:UniProtKB/TrEMBL;Acc:A0A178UN24]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.