Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX81402 | Canola | cytosol | 74.07 | 97.22 |
| CDY18597 | Canola | cytosol | 73.55 | 96.53 |
| CDY54976 | Canola | cytosol | 73.55 | 96.53 |
| CDY55093 | Canola | cytosol | 93.12 | 92.63 |
| AT5G66400.1 | Thale cress | cytosol | 80.95 | 82.26 |
| CDX77969 | Canola | nucleus | 46.56 | 64.71 |
| CDX73764 | Canola | cytosol | 45.5 | 64.18 |
| GSMUA_Achr4P11310_001 | Banana | nucleus | 31.22 | 61.46 |
| Solyc01g065820.1.1 | Tomato | nucleus | 21.69 | 52.56 |
| PGSC0003DMT400009070 | Potato | cytosol | 42.33 | 50.96 |
| VIT_04s0023g02480.t01 | Wine grape | cytosol | 34.92 | 50.77 |
| KXG33203 | Sorghum | nucleus | 42.86 | 38.94 |
| TraesCS3D01G255500.1 | Wheat | cytosol | 37.57 | 33.02 |
| Os01t0702500-01 | Rice | cytosol, plastid | 32.8 | 32.98 |
| TraesCS3B01G286600.1 | Wheat | cytosol | 37.57 | 32.72 |
| TraesCS3A01G254600.1 | Wheat | cytosol | 35.98 | 31.92 |
| Zm00001d043730_P001 | Maize | cytosol | 38.1 | 30.51 |
Protein Annotations
| EnsemblPlants:CDY65890 | EnsemblPlantsGene:GSBRNA2T00050955001 | GO:A0A078JHB9 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0009415 |
| GO:GO:0009628 | InterPro:Dehydrin | InterPro:Dehydrin_CS | PANTHER:PTHR33346 | PFAM:PF00257 | ProteinID:CDY65890 |
| ProteinID:CDY65890.1 | ScanProsite:PS00315 | ScanProsite:PS00823 | SEG:seg | UniParc:UPI0004EB4994 | UniProt:A0A078JHB9 |
| MapMan:35.2 | : | : | : | : | : |
Description
BnaC02g45160DBnaC02g45160D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JHB9]
Coordinates
chrLK034989:-:10990..11984
Molecular Weight (calculated)
18516.2 Da
IEP (calculated)
8.712
GRAVY (calculated)
-1.021
Length
189 amino acids
Sequence
(BLAST)
(BLAST)
001: MASYQNRPGA QATDEYGNPI QQLDEYGNPI GGGGYGTGGG LGATGGGGYG TGGGYGGGAT GGTYGTGGEG YGAGTGALGA GAGGRHHGQQ QLHKESGGGL
101: GGMLHRSGSG SSSSSEDDGQ GGRRKKKGIT DKIKEKLPGH HDQSSGQSQG MGMGTTTGYD AGGYGGERHE KKGMMEKIKE KLPGGGGHH
101: GGMLHRSGSG SSSSSEDDGQ GGRRKKKGIT DKIKEKLPGH HDQSSGQSQG MGMGTTTGYD AGGYGGERHE KKGMMEKIKE KLPGGGGHH
001: MASYQNRPGG QATDEYGNPI QQQYDEYGNP MGGGGYGTGG GGGATGGQGY GTGGQGYGSG GQGYGTGGQG YGTGTGTEGF GTGGGARHHG QEQLHKESGG
101: GLGGMLHRSG SGSSSSSEDD GQGGRRKKGI TQKIKEKLPG HHDQSGQAQA MGGMGSGYDA GGYGGEHHEK KGMMDKIKEK LPGGGR
101: GLGGMLHRSG SGSSSSSEDD GQGGRRKKGI TQKIKEKLPG HHDQSGQAQA MGGMGSGYDA GGYGGEHHEK KGMMDKIKEK LPGGGR
Arabidopsis Description
RAB18RAB18 [Source:UniProtKB/TrEMBL;Acc:A0A178UN24]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.