Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra031809.1-P | Field mustard | cytosol | 98.95 | 97.92 |
| CDX81402 | Canola | cytosol | 71.58 | 94.44 |
| CDY18597 | Canola | cytosol | 71.05 | 93.75 |
| CDY54976 | Canola | cytosol | 71.05 | 93.75 |
| CDY65890 | Canola | cytosol | 92.63 | 93.12 |
| AT5G66400.1 | Thale cress | cytosol | 79.47 | 81.18 |
| CDX77969 | Canola | nucleus | 45.79 | 63.97 |
| CDX73764 | Canola | cytosol | 44.74 | 63.43 |
| GSMUA_Achr4P11310_001 | Banana | nucleus | 31.05 | 61.46 |
| Solyc01g065820.1.1 | Tomato | nucleus | 21.58 | 52.56 |
| PGSC0003DMT400009070 | Potato | cytosol | 43.16 | 52.23 |
| VIT_04s0023g02480.t01 | Wine grape | cytosol | 34.21 | 50.0 |
| KXG33203 | Sorghum | nucleus | 41.05 | 37.5 |
| TraesCS3D01G255500.1 | Wheat | cytosol | 36.84 | 32.56 |
| Os01t0702500-01 | Rice | cytosol, plastid | 32.11 | 32.45 |
| TraesCS3B01G286600.1 | Wheat | cytosol | 36.84 | 32.26 |
| TraesCS3A01G254600.1 | Wheat | cytosol | 35.26 | 31.46 |
| Zm00001d043730_P001 | Maize | cytosol | 36.84 | 29.66 |
Protein Annotations
| EnsemblPlants:CDY55093 | EnsemblPlantsGene:GSBRNA2T00016397001 | GO:A0A078J0A5 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0009415 |
| GO:GO:0009628 | InterPro:Dehydrin | InterPro:Dehydrin_CS | PANTHER:PTHR33346 | PFAM:PF00257 | ProteinID:CDY55093 |
| ProteinID:CDY55093.1 | ScanProsite:PS00315 | ScanProsite:PS00823 | SEG:seg | UniParc:UPI0004EDEA26 | UniProt:A0A078J0A5 |
| MapMan:35.2 | : | : | : | : | : |
Description
BnaA02g34800DBnaA02g34800D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J0A5]
Coordinates
chrLK033375:-:27905..28867
Molecular Weight (calculated)
18625.2 Da
IEP (calculated)
7.990
GRAVY (calculated)
-1.023
Length
190 amino acids
Sequence
(BLAST)
(BLAST)
001: MASYQNRPGA QATDEYGNPI QQLDEYGNPI GGGGYGTAGG GLGATGGGGY GTAGGGYGGG ATGGTYGTGG EGYGTGTGAL GAGAGGRHHG QQQLHEESGG
101: GRGLGGMLHR SGSGSSSSSE DDGQGGRRKK KGITDKIKEK LPGHHDQSSG QSQGMGMGTT TGYDAGGERH EKKGMMEKIK EKLPGGGGHH
101: GRGLGGMLHR SGSGSSSSSE DDGQGGRRKK KGITDKIKEK LPGHHDQSSG QSQGMGMGTT TGYDAGGERH EKKGMMEKIK EKLPGGGGHH
001: MASYQNRPGG QATDEYGNPI QQQYDEYGNP MGGGGYGTGG GGGATGGQGY GTGGQGYGSG GQGYGTGGQG YGTGTGTEGF GTGGGARHHG QEQLHKESGG
101: GLGGMLHRSG SGSSSSSEDD GQGGRRKKGI TQKIKEKLPG HHDQSGQAQA MGGMGSGYDA GGYGGEHHEK KGMMDKIKEK LPGGGR
101: GLGGMLHRSG SGSSSSSEDD GQGGRRKKGI TQKIKEKLPG HHDQSGQAQA MGGMGSGYDA GGYGGEHHEK KGMMDKIKEK LPGGGR
Arabidopsis Description
RAB18RAB18 [Source:UniProtKB/TrEMBL;Acc:A0A178UN24]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.