Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- nucleus 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr4P11310_001 | Banana | nucleus | 29.33 | 63.54 |
| Zm00001d043730_P001 | Maize | cytosol | 68.27 | 60.17 |
| Solyc01g065820.1.1 | Tomato | nucleus | 21.63 | 57.69 |
| TraesCS3A01G254600.1 | Wheat | cytosol | 56.25 | 54.93 |
| TraesCS3B01G286600.1 | Wheat | cytosol | 57.21 | 54.84 |
| AT3G50980.1 | Thale cress | cytosol | 33.17 | 53.91 |
| TraesCS3D01G255500.1 | Wheat | cytosol | 55.29 | 53.49 |
| Bra036843.1-P | Field mustard | cytosol | 33.17 | 51.49 |
| CDX77969 | Canola | nucleus | 33.65 | 51.47 |
| CDX81402 | Canola | cytosol | 35.58 | 51.39 |
| CDY18597 | Canola | cytosol | 35.58 | 51.39 |
| CDY54976 | Canola | cytosol | 35.58 | 51.39 |
| Bra037177.1-P | Field mustard | cytosol | 35.58 | 51.39 |
| CDX73764 | Canola | cytosol | 32.21 | 50.0 |
| PGSC0003DMT400009070 | Potato | cytosol | 36.06 | 47.77 |
| Os01t0702500-01 | Rice | cytosol, plastid | 41.83 | 46.28 |
| VIT_04s0023g02480.t01 | Wine grape | cytosol | 27.4 | 43.85 |
| CDY65890 | Canola | cytosol | 38.94 | 42.86 |
| CDY55093 | Canola | cytosol | 37.5 | 41.05 |
| Bra031809.1-P | Field mustard | cytosol | 37.5 | 40.62 |
| AT5G66400.1 | Thale cress | cytosol | 34.62 | 38.71 |
Protein Annotations
| EnsemblPlants:KXG33203 | EnsemblPlantsGene:SORBI_3003G270200 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0009415 | GO:GO:0009628 |
| InterPro:Dehydrin | InterPro:Dehydrin_CS | PANTHER:PTHR33346 | PANTHER:PTHR33346:SF5 | PFAM:PF00257 | ProteinID:KXG33203 |
| ProteinID:KXG33203.1 | ScanProsite:PS00315 | ScanProsite:PS00823 | SEG:seg | UniParc:UPI00081ACCA4 | UniProt:A0A1B6Q5L6 |
| MapMan:35.1 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr3:+:60680837..60682275
Molecular Weight (calculated)
21904.3 Da
IEP (calculated)
8.716
GRAVY (calculated)
-1.006
Length
208 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEYQGEYGH PYPRVDQYGN PVPPVDQYGN PVPREPASGL GGTAPAYSST GDSSVAPVEY GARAEYASGG VAAVAPGETA LAYEGMVGGG HLQPTKEEHT
101: FGPGAQLQPT KEEHTATLGE KLRRSGSSSS SSSSSSEDDG QGGRRKKKKK SIKEKIKEKL PGSHKHEEHK AGHVAPATTT TTGTHAAGTH EKKGFMEKIK
201: EKLPGHHH
101: FGPGAQLQPT KEEHTATLGE KLRRSGSSSS SSSSSSEDDG QGGRRKKKKK SIKEKIKEKL PGSHKHEEHK AGHVAPATTT TTGTHAAGTH EKKGFMEKIK
201: EKLPGHHH
001: MADLRDEKGN PIHLTDTQGN PIVDLTDEHG NPMYLTGVVS STPQHKESTT SDIAEHPTST VGETHPAAAP AGAGAATAAT ATGVSAGTGA TTTGQQHHGS
101: LEEHLRRSGS SSSSSSEDDG QGGRRKKSIK EKIKEKFGSG KHKDEQTPAT ATTTGPATTD QPHEKKGILE KIKDKLPGHH NHNHP
101: LEEHLRRSGS SSSSSSEDDG QGGRRKKSIK EKIKEKFGSG KHKDEQTPAT ATTTGPATTD QPHEKKGILE KIKDKLPGHH NHNHP
Arabidopsis Description
LEAProbable dehydrin LEA [Source:UniProtKB/Swiss-Prot;Acc:Q96261]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.