Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- vacuole 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc02g084840.2.1 | Tomato | cytosol | 98.73 | 98.73 |
| GSMUA_Achr4P11310_001 | Banana | nucleus | 35.03 | 57.29 |
| AT3G50980.1 | Thale cress | cytosol | 45.86 | 56.25 |
| Bra036843.1-P | Field mustard | cytosol | 45.86 | 53.73 |
| CDX81402 | Canola | cytosol | 49.04 | 53.47 |
| CDY18597 | Canola | cytosol | 49.04 | 53.47 |
| CDY54976 | Canola | cytosol | 49.04 | 53.47 |
| CDX77969 | Canola | nucleus | 45.86 | 52.94 |
| Bra037177.1-P | Field mustard | cytosol | 48.41 | 52.78 |
| CDX73764 | Canola | cytosol | 43.31 | 50.75 |
| VIT_04s0023g02480.t01 | Wine grape | cytosol | 40.76 | 49.23 |
| CDY55093 | Canola | cytosol | 52.23 | 43.16 |
| Bra031809.1-P | Field mustard | cytosol | 52.23 | 42.71 |
| CDY65890 | Canola | cytosol | 50.96 | 42.33 |
| AT5G66400.1 | Thale cress | cytosol | 45.86 | 38.71 |
| Os01t0702500-01 | Rice | cytosol, plastid | 43.31 | 36.17 |
| KXG33203 | Sorghum | nucleus | 47.77 | 36.06 |
| TraesCS3B01G286600.1 | Wheat | cytosol | 47.77 | 34.56 |
| TraesCS3D01G255500.1 | Wheat | cytosol | 46.5 | 33.95 |
| TraesCS3A01G254600.1 | Wheat | cytosol | 42.68 | 31.46 |
| Zm00001d043730_P001 | Maize | cytosol | 46.5 | 30.93 |
Protein Annotations
| EMBL:X83597 | EnsemblPlants:PGSC0003DMT400009070 | EnsemblPlantsGene:PGSC0003DMG400003531 | EntrezGene:102597686 | GO:GO:0006950 | GO:GO:0008150 |
| GO:GO:0009415 | GO:GO:0009628 | InterPro:Dehydrin | InterPro:Dehydrin_CS | PANTHER:PTHR33346 | PANTHER:PTHR33346:SF9 |
| PFAM:PF00257 | PGSC:PGSC0003DMG400003531 | ProteinID:CAA58576 | ProteinID:CAA58576.1 | RefSeq:XP_015160032.1 | ScanProsite:PS00315 |
| ScanProsite:PS00823 | SEG:seg | UniParc:UPI0002952E18 | UniProt:M0ZVK5 | MapMan:35.2 | : |
Description
Dhn1 protein [Source:PGSC_GENE;Acc:PGSC0003DMG400003531]
Coordinates
chr2:-:40090041..40090994
Molecular Weight (calculated)
16660.1 Da
IEP (calculated)
8.071
GRAVY (calculated)
-1.214
Length
157 amino acids
Sequence
(BLAST)
(BLAST)
001: MAHYENQYSA GQALQTDEYG NPVRQTDEYG NPIQQTGGTM GEYGTTGTGY GTQAGHTTGV LGGEQRQHGT LGGMLHRSGS SSSSSSSEDD GHGGRRKKKG
101: IKDKVKEKLP GGHRDDLAHS TATTTTTGYG MEGTHEKKGI MEKIKEKLPG HHGPGHH
101: IKDKVKEKLP GGHRDDLAHS TATTTTTGYG MEGTHEKKGI MEKIKEKLPG HHGPGHH
001: MESYQNQSGA QQTHQQLDQF GNPFPATTGA YGTAGGAPAV AEGGGLSGML HRSGSSSSSS SEDDGLGGRR RKKKGITEKI KEKLPGHHDS NKTSSLGSTT
101: TAYDTGTVHH EKKGMMEKIK EKLPGGHH
101: TAYDTGTVHH EKKGMMEKIK EKLPGGHH
Arabidopsis Description
XERO1Dehydrin Xero 1 [Source:UniProtKB/Swiss-Prot;Acc:P25863]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.