Factsheet for Os01t0702500-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol, nucleus
PProwler:	mitochondrion
YLoc:	cytosol

plastid: 27992503

msms PMID: 27992503 doi

S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng

Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P11310_001	Banana	nucleus	29.26	57.29
Solyc01g065820.1.1	Tomato	nucleus	23.4	56.41
PGSC0003DMT400009070	Potato	cytosol	36.17	43.31
Bra036843.1-P	Field mustard	cytosol	30.32	42.54
CDX81402	Canola	cytosol	32.45	42.36
CDY18597	Canola	cytosol	32.45	42.36
CDY54976	Canola	cytosol	32.45	42.36
AT3G50980.1	Thale cress	cytosol	28.72	42.19
CDX77969	Canola	nucleus	30.32	41.91
KXG33203	Sorghum	nucleus	46.28	41.83
Bra037177.1-P	Field mustard	cytosol	31.91	41.67
CDX73764	Canola	cytosol	28.72	40.3
TraesCS3B01G286600.1	Wheat	cytosol	43.62	37.79
TraesCS3D01G255500.1	Wheat	cytosol	42.55	37.21
TraesCS3A01G254600.1	Wheat	cytosol	41.49	36.62
VIT_04s0023g02480.t01	Wine grape	cytosol	25.0	36.15
Zm00001d043730_P001	Maize	cytosol	43.62	34.75
CDY65890	Canola	cytosol	32.98	32.8
Bra031809.1-P	Field mustard	cytosol	32.98	32.29
CDY55093	Canola	cytosol	32.45	32.11
AT5G66400.1	Thale cress	cytosol	31.38	31.72

Protein Annotations

MapMan:35.1	UniProt:A0A0P0V781	ProteinID:BAS73904.1	InterPro:Dehydrin	InterPro:Dehydrin_CS	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0006950	GO:GO:0008150
GO:GO:0009414	GO:GO:0009415	GO:GO:0009628	GO:GO:0009631	GO:GO:0009719	GO:GO:0009737
EnsemblPlantsGene:Os01g0702500	EnsemblPlants:Os01t0702500-01	PFAM:PF00257	ScanProsite:PS00315	ScanProsite:PS00823	PANTHER:PTHR33346
UniParc:UPI000393B2FB	SEG:seg	:	:	:	:

Description

LATE EMBRYOGENESIS ABUNDANT PROTEIN 24Similar to Dehydrin Rab25. (Os01t0702500-01)

Coordinates

chr1:+:29123535..29124590

Molecular Weight (calculated)

19343.4 Da

IEP (calculated)

9.944

GRAVY (calculated)

-0.862

Length

188 amino acids

Sequence
(BLAST)

001: IQFPISSIAR ITHGSKRVTE LETEEAPHPH ESAVMSGAAA AAVAPGGEAY TRDGGGVVPP AGEKTFAYEG TVSAAGVTGA SGQLQPTTRE EGHTTLGETL
101: RRSGKSSSSS SSSSEDDGQG GRRKKKSIKE KIKEKLPGSH KQEEQKQAGH TAPAAGTGTG TGTHAAGKHE KKGIVEKIKE KLPGHGHH

Best Arabidopsis Sequence Match ( AT5G66400.1 )
(BLAST)

001: MASYQNRPGG QATDEYGNPI QQQYDEYGNP MGGGGYGTGG GGGATGGQGY GTGGQGYGSG GQGYGTGGQG YGTGTGTEGF GTGGGARHHG QEQLHKESGG
101: GLGGMLHRSG SGSSSSSEDD GQGGRRKKGI TQKIKEKLPG HHDQSGQAQA MGGMGSGYDA GGYGGEHHEK KGMMDKIKEK LPGGGR

Arabidopsis Description

RAB18RAB18 [Source:UniProtKB/TrEMBL;Acc:A0A178UN24]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.