Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra036843.1-P | Field mustard | cytosol | 89.55 | 89.55 |
| CDX77969 | Canola | nucleus | 89.55 | 88.24 |
| AT3G50980.1 | Thale cress | cytosol | 70.15 | 73.44 |
| CDX81402 | Canola | cytosol | 61.94 | 57.64 |
| CDY18597 | Canola | cytosol | 61.19 | 56.94 |
| CDY54976 | Canola | cytosol | 61.19 | 56.94 |
| GSMUA_Achr4P11310_001 | Banana | nucleus | 40.3 | 56.25 |
| Solyc01g065820.1.1 | Tomato | nucleus | 28.36 | 48.72 |
| CDY65890 | Canola | cytosol | 64.18 | 45.5 |
| CDY55093 | Canola | cytosol | 63.43 | 44.74 |
| VIT_04s0023g02480.t01 | Wine grape | cytosol | 43.28 | 44.62 |
| PGSC0003DMT400009070 | Potato | cytosol | 50.75 | 43.31 |
| KXG33203 | Sorghum | nucleus | 50.0 | 32.21 |
| Os01t0702500-01 | Rice | cytosol, plastid | 40.3 | 28.72 |
| TraesCS3D01G255500.1 | Wheat | cytosol | 43.28 | 26.98 |
| TraesCS3B01G286600.1 | Wheat | cytosol | 42.54 | 26.27 |
| Zm00001d043730_P001 | Maize | cytosol | 44.03 | 25.0 |
| TraesCS3A01G254600.1 | Wheat | cytosol | 38.06 | 23.94 |
Protein Annotations
| EnsemblPlants:CDX73764 | EnsemblPlantsGene:GSBRNA2T00109382001 | GO:A0A078CC26 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0009415 |
| GO:GO:0009628 | InterPro:Dehydrin | InterPro:Dehydrin_CS | PANTHER:PTHR33346 | PANTHER:PTHR33346:SF9 | PFAM:PF00257 |
| ProteinID:CDX73764 | ProteinID:CDX73764.1 | ScanProsite:PS00315 | ScanProsite:PS00823 | SEG:seg | UniParc:UPI0004EC32AA |
| MapMan:35.2 | : | : | : | : | : |
Description
BnaC08g22390D
Coordinates
chrLK031799:-:2595519..2596811
Molecular Weight (calculated)
13874.2 Da
IEP (calculated)
9.679
GRAVY (calculated)
-0.823
Length
134 amino acids
Sequence
(BLAST)
(BLAST)
001: MESYQNQSGA QLTHPQLDQY GNPVPIGTGA YGGAPVMAGH YTEGGGGLSG MLHRSGSSSS SSSSSEDDGL GGRRRKKGIT AKIKEKLPGH HGSHQTSSAT
101: STIPVYDATG TGAVHHEKKG IMEKIKEKLP GGHH
101: STIPVYDATG TGAVHHEKKG IMEKIKEKLP GGHH
001: MESYQNQSGA QQTHQQLDQF GNPFPATTGA YGTAGGAPAV AEGGGLSGML HRSGSSSSSS SEDDGLGGRR RKKKGITEKI KEKLPGHHDS NKTSSLGSTT
101: TAYDTGTVHH EKKGMMEKIK EKLPGGHH
101: TAYDTGTVHH EKKGMMEKIK EKLPGGHH
Arabidopsis Description
XERO1Dehydrin Xero 1 [Source:UniProtKB/Swiss-Prot;Acc:P25863]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.