Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra036843.1-P | Field mustard | cytosol | 98.53 | 100.0 |
| CDX73764 | Canola | cytosol | 88.24 | 89.55 |
| AT3G50980.1 | Thale cress | cytosol | 72.79 | 77.34 |
| CDX81402 | Canola | cytosol | 62.5 | 59.03 |
| CDY18597 | Canola | cytosol | 61.76 | 58.33 |
| CDY54976 | Canola | cytosol | 61.76 | 58.33 |
| GSMUA_Achr4P11310_001 | Banana | nucleus | 39.71 | 56.25 |
| Solyc01g065820.1.1 | Tomato | nucleus | 28.68 | 50.0 |
| CDY65890 | Canola | cytosol | 64.71 | 46.56 |
| VIT_04s0023g02480.t01 | Wine grape | cytosol | 44.12 | 46.15 |
| PGSC0003DMT400009070 | Potato | cytosol | 52.94 | 45.86 |
| CDY55093 | Canola | cytosol | 63.97 | 45.79 |
| KXG33203 | Sorghum | nucleus | 51.47 | 33.65 |
| Os01t0702500-01 | Rice | cytosol, plastid | 41.91 | 30.32 |
| TraesCS3D01G255500.1 | Wheat | cytosol | 43.38 | 27.44 |
| TraesCS3B01G286600.1 | Wheat | cytosol | 42.65 | 26.73 |
| Zm00001d043730_P001 | Maize | cytosol | 44.12 | 25.42 |
| TraesCS3A01G254600.1 | Wheat | cytosol | 38.97 | 24.88 |
Protein Annotations
| EnsemblPlants:CDX77969 | EnsemblPlantsGene:GSBRNA2T00129233001 | GO:A0A078CPG4 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0009415 |
| GO:GO:0009628 | InterPro:Dehydrin | InterPro:Dehydrin_CS | PANTHER:PTHR33346 | PANTHER:PTHR33346:SF9 | PFAM:PF00257 |
| ProteinID:CDX77969 | ProteinID:CDX77969.1 | ScanProsite:PS00315 | ScanProsite:PS00823 | SEG:seg | UniParc:UPI0004EEF156 |
| MapMan:35.2 | : | : | : | : | : |
Description
BnaA09g31640D
Coordinates
chrLK031814:+:342811..344082
Molecular Weight (calculated)
14050.3 Da
IEP (calculated)
9.930
GRAVY (calculated)
-0.909
Length
136 amino acids
Sequence
(BLAST)
(BLAST)
001: MESYQNQSGA QQTHPQLDQY GNPVPIGTGA YGGAPVMAGH HTEGGGGLSG MLHRSGSSSS SSSSSEDDGL GGRRKKKKGI TAKIKEKLPG HHGSSHQTSS
101: ATSTIPVYDA TGTGAVHHEK KGIMEKIKEK LPGGHH
101: ATSTIPVYDA TGTGAVHHEK KGIMEKIKEK LPGGHH
001: MESYQNQSGA QQTHQQLDQF GNPFPATTGA YGTAGGAPAV AEGGGLSGML HRSGSSSSSS SEDDGLGGRR RKKKGITEKI KEKLPGHHDS NKTSSLGSTT
101: TAYDTGTVHH EKKGMMEKIK EKLPGGHH
101: TAYDTGTVHH EKKGMMEKIK EKLPGGHH
Arabidopsis Description
XERO1Dehydrin Xero 1 [Source:UniProtKB/Swiss-Prot;Acc:P25863]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.