Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- vacuole 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX77969 | Canola | nucleus | 100.0 | 98.53 |
| CDX73764 | Canola | cytosol | 89.55 | 89.55 |
| AT3G50980.1 | Thale cress | cytosol | 73.13 | 76.56 |
| Bra037177.1-P | Field mustard | cytosol | 62.69 | 58.33 |
| GSMUA_Achr4P11310_001 | Banana | nucleus | 40.3 | 56.25 |
| Solyc01g065820.1.1 | Tomato | nucleus | 29.1 | 50.0 |
| VIT_04s0023g02480.t01 | Wine grape | cytosol | 44.78 | 46.15 |
| PGSC0003DMT400009070 | Potato | cytosol | 53.73 | 45.86 |
| Bra031809.1-P | Field mustard | cytosol | 65.67 | 45.83 |
| KXG33203 | Sorghum | nucleus | 51.49 | 33.17 |
| Os01t0702500-01 | Rice | cytosol, plastid | 42.54 | 30.32 |
| TraesCS3D01G255500.1 | Wheat | cytosol | 44.03 | 27.44 |
| TraesCS3B01G286600.1 | Wheat | cytosol | 43.28 | 26.73 |
| Zm00001d043730_P001 | Maize | cytosol | 44.78 | 25.42 |
| TraesCS3A01G254600.1 | Wheat | cytosol | 39.55 | 24.88 |
Protein Annotations
| EnsemblPlants:Bra036843.1 | EnsemblPlants:Bra036843.1-P | EnsemblPlantsGene:Bra036843 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005829 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0009415 | GO:GO:0009628 |
| InterPro:Dehydrin | InterPro:Dehydrin_CS | PANTHER:PTHR33346 | PANTHER:PTHR33346:SF9 | PFAM:PF00257 | ScanProsite:PS00315 |
| ScanProsite:PS00823 | SEG:seg | UniParc:UPI0002542C5B | UniProt:M4F6Y3 | MapMan:35.2 | : |
Description
AT3G50980 (E=3e-011) XERO1 | XERO1 (DEHYDRIN XERO 1)
Coordinates
chrA09:+:25448305..25449316
Molecular Weight (calculated)
13835.1 Da
IEP (calculated)
9.733
GRAVY (calculated)
-0.887
Length
134 amino acids
Sequence
(BLAST)
(BLAST)
001: MESYQNQSGA QQTHPQLDQY GNPVPIGTGA YGGAPVMAGH HTEGGGGLSG MLHRSGSSSS SSSSSEDDGL GGRRKKKGIT AKIKEKLPGH HGSHQTSSAT
101: STIPVYDATG TGAVHHEKKG IMEKIKEKLP GGHH
101: STIPVYDATG TGAVHHEKKG IMEKIKEKLP GGHH
001: MESYQNQSGA QQTHQQLDQF GNPFPATTGA YGTAGGAPAV AEGGGLSGML HRSGSSSSSS SEDDGLGGRR RKKKGITEKI KEKLPGHHDS NKTSSLGSTT
101: TAYDTGTVHH EKKGMMEKIK EKLPGGHH
101: TAYDTGTVHH EKKGMMEKIK EKLPGGHH
Arabidopsis Description
XERO1Dehydrin Xero 1 [Source:UniProtKB/Swiss-Prot;Acc:P25863]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.