Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G254600.1 | Wheat | cytosol | 86.64 | 88.26 |
| TraesCS3D01G255500.1 | Wheat | cytosol | 77.42 | 78.14 |
| Solyc01g065820.1.1 | Tomato | nucleus | 20.74 | 57.69 |
| KXG33203 | Sorghum | nucleus | 54.84 | 57.21 |
| GSMUA_Achr4P11310_001 | Banana | nucleus | 23.96 | 54.17 |
| PGSC0003DMT400009070 | Potato | cytosol | 34.56 | 47.77 |
| CDY54976 | Canola | cytosol | 30.88 | 46.53 |
| CDY18597 | Canola | cytosol | 30.88 | 46.53 |
| CDX81402 | Canola | cytosol | 30.88 | 46.53 |
| Bra037177.1-P | Field mustard | cytosol | 30.88 | 46.53 |
| Zm00001d043730_P001 | Maize | cytosol | 50.23 | 46.19 |
| VIT_04s0023g02480.t01 | Wine grape | cytosol | 26.73 | 44.62 |
| AT3G50980.1 | Thale cress | cytosol | 25.81 | 43.75 |
| Os01t0702500-01 | Rice | cytosol, plastid | 37.79 | 43.62 |
| Bra036843.1-P | Field mustard | cytosol | 26.73 | 43.28 |
| CDX77969 | Canola | nucleus | 26.73 | 42.65 |
| CDX73764 | Canola | cytosol | 26.27 | 42.54 |
| CDY65890 | Canola | cytosol | 32.72 | 37.57 |
| CDY55093 | Canola | cytosol | 32.26 | 36.84 |
| Bra031809.1-P | Field mustard | cytosol | 32.26 | 36.46 |
| AT5G66400.1 | Thale cress | cytosol | 30.88 | 36.02 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G286600.1 | EnsemblPlantsGene:TraesCS3B01G286600 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0009415 | GO:GO:0009628 |
| InterPro:Dehydrin | InterPro:Dehydrin_CS | PANTHER:PTHR33346 | PFAM:PF00257 | ScanProsite:PS00315 | ScanProsite:PS00823 |
| SEG:seg | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr3B:-:458398889..458399630
Molecular Weight (calculated)
22298.7 Da
IEP (calculated)
7.496
GRAVY (calculated)
-0.856
Length
217 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEYGGGYGH PYPRVDEYGN PVPPVDQYGN PIPREPGQVP AYSSGGASPS YGSAGAVTSA DYGAGVTPGY GLSGAVHPHE SVVGGAVSPS GAAHTHEGAL
101: SGGLAPGETT AYAYEGMVGR GISTGDQIQP TKEGHTTLGE TLRRSSSSSS SSSSEDDGQG GRQRKKKSMK EKIKEKLPGN HKQEEHKAGH TVPAAGTGTH
201: EKKGIMEKIK EKLPGHH
101: SGGLAPGETT AYAYEGMVGR GISTGDQIQP TKEGHTTLGE TLRRSSSSSS SSSSEDDGQG GRQRKKKSMK EKIKEKLPGN HKQEEHKAGH TVPAAGTGTH
201: EKKGIMEKIK EKLPGHH
001: MESYQNQSGA QQTHQQLDQF GNPFPATTGA YGTAGGAPAV AEGGGLSGML HRSGSSSSSS SEDDGLGGRR RKKKGITEKI KEKLPGHHDS NKTSSLGSTT
101: TAYDTGTVHH EKKGMMEKIK EKLPGGHH
101: TAYDTGTVHH EKKGMMEKIK EKLPGGHH
Arabidopsis Description
XERO1Dehydrin Xero 1 [Source:UniProtKB/Swiss-Prot;Acc:P25863]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.