Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 1
- golgi 1
- extracellular 1
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX81402 | Canola | cytosol | 65.05 | 84.03 |
| CDY18597 | Canola | cytosol | 64.52 | 83.33 |
| CDY54976 | Canola | cytosol | 64.52 | 83.33 |
| Bra037177.1-P | Field mustard | cytosol | 63.98 | 82.64 |
| CDY65890 | Canola | cytosol | 82.26 | 80.95 |
| Bra031809.1-P | Field mustard | cytosol | 82.8 | 80.21 |
| CDY55093 | Canola | cytosol | 81.18 | 79.47 |
| AT3G50980.1 | Thale cress | cytosol | 41.94 | 60.94 |
| GSMUA_Achr4P11310_001 | Banana | nucleus | 31.18 | 60.42 |
| Solyc01g065820.1.1 | Tomato | nucleus | 19.89 | 47.44 |
| VIT_04s0023g02480.t01 | Wine grape | cytosol | 32.8 | 46.92 |
| PGSC0003DMT400009070 | Potato | cytosol | 38.71 | 45.86 |
| KXG33203 | Sorghum | nucleus | 38.71 | 34.62 |
| Os01t0702500-01 | Rice | cytosol, plastid | 31.72 | 31.38 |
| TraesCS3D01G255500.1 | Wheat | cytosol | 36.02 | 31.16 |
| TraesCS3B01G286600.1 | Wheat | cytosol | 36.02 | 30.88 |
| TraesCS3A01G254600.1 | Wheat | cytosol | 33.87 | 29.58 |
| Zm00001d043730_P001 | Maize | cytosol | 35.48 | 27.97 |
Protein Annotations
| MapMan:35.1 | EntrezGene:836772 | UniProt:A0A178UN24 | ProteinID:AAA32722.1 | ProteinID:AED98208.1 | EMBL:AF428458 |
| ArrayExpress:AT5G66400 | EnsemblPlantsGene:AT5G66400 | RefSeq:AT5G66400 | TAIR:AT5G66400 | RefSeq:AT5G66400-TAIR-G | EnsemblPlants:AT5G66400.1 |
| TAIR:AT5G66400.1 | EMBL:AY093779 | Unigene:At.20221 | ProteinID:BAB10916.1 | EMBL:BT002226 | ProteinID:CAA48178.1 |
| InterPro:Dehydrin | InterPro:Dehydrin_CS | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005507 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0006950 | GO:GO:0008150 |
| GO:GO:0009414 | GO:GO:0009415 | GO:GO:0009628 | GO:GO:0009631 | GO:GO:0009719 | GO:GO:0009737 |
| GO:GO:0009961 | GO:GO:0016151 | RefSeq:NP_201441.1 | ProteinID:OAO95259.1 | UniProt:P30185 | PFAM:PF00257 |
| PO:PO:0000013 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001040 | PO:PO:0001054 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009006 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | ScanProsite:PS00315 | ScanProsite:PS00823 | PANTHER:PTHR33346 |
| Symbol:RAB18 | UniParc:UPI0000000D48 | SEG:seg | : | : | : |
Description
RAB18RAB18 [Source:UniProtKB/TrEMBL;Acc:A0A178UN24]
Coordinates
chr5:-:26518297..26519447
Molecular Weight (calculated)
18465.0 Da
IEP (calculated)
7.950
GRAVY (calculated)
-1.182
Length
186 amino acids
Sequence
(BLAST)
(BLAST)
001: MASYQNRPGG QATDEYGNPI QQQYDEYGNP MGGGGYGTGG GGGATGGQGY GTGGQGYGSG GQGYGTGGQG YGTGTGTEGF GTGGGARHHG QEQLHKESGG
101: GLGGMLHRSG SGSSSSSEDD GQGGRRKKGI TQKIKEKLPG HHDQSGQAQA MGGMGSGYDA GGYGGEHHEK KGMMDKIKEK LPGGGR
101: GLGGMLHRSG SGSSSSSEDD GQGGRRKKGI TQKIKEKLPG HHDQSGQAQA MGGMGSGYDA GGYGGEHHEK KGMMDKIKEK LPGGGR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.