Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G286600.1 | Wheat | cytosol | 78.14 | 77.42 |
| TraesCS3A01G254600.1 | Wheat | cytosol | 70.7 | 71.36 |
| Solyc01g065820.1.1 | Tomato | nucleus | 20.47 | 56.41 |
| KXG33203 | Sorghum | nucleus | 53.49 | 55.29 |
| GSMUA_Achr4P11310_001 | Banana | nucleus | 24.19 | 54.17 |
| Zm00001d043730_P001 | Maize | cytosol | 53.02 | 48.31 |
| CDX81402 | Canola | cytosol | 31.16 | 46.53 |
| CDY18597 | Canola | cytosol | 31.16 | 46.53 |
| CDY54976 | Canola | cytosol | 31.16 | 46.53 |
| Bra037177.1-P | Field mustard | cytosol | 31.16 | 46.53 |
| PGSC0003DMT400009070 | Potato | cytosol | 33.95 | 46.5 |
| VIT_04s0023g02480.t01 | Wine grape | cytosol | 26.98 | 44.62 |
| Bra036843.1-P | Field mustard | cytosol | 27.44 | 44.03 |
| AT3G50980.1 | Thale cress | cytosol | 26.05 | 43.75 |
| CDX77969 | Canola | nucleus | 27.44 | 43.38 |
| CDX73764 | Canola | cytosol | 26.98 | 43.28 |
| Os01t0702500-01 | Rice | cytosol, plastid | 37.21 | 42.55 |
| CDY65890 | Canola | cytosol | 33.02 | 37.57 |
| CDY55093 | Canola | cytosol | 32.56 | 36.84 |
| Bra031809.1-P | Field mustard | cytosol | 32.56 | 36.46 |
| AT5G66400.1 | Thale cress | cytosol | 31.16 | 36.02 |
Protein Annotations
| EnsemblPlants:TraesCS3D01G255500.1 | EnsemblPlantsGene:TraesCS3D01G255500 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0009415 | GO:GO:0009628 |
| InterPro:Dehydrin | InterPro:Dehydrin_CS | PANTHER:PTHR33346 | PFAM:PF00257 | ScanProsite:PS00315 | ScanProsite:PS00823 |
| SEG:seg | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr3D:-:357147150..357147922
Molecular Weight (calculated)
22244.6 Da
IEP (calculated)
7.189
GRAVY (calculated)
-0.912
Length
215 amino acids
Sequence
(BLAST)
(BLAST)
001: MADYGGEYGH PYPRVDEYGN PVPPVDQYGN PIPREPGQVP AYSSGGAAPS YGSAGAVTSA DYGAGVTPGY GQRGAVHPHE SVVGGAVSPS GVAHTHEGAL
101: SGSLAPGETT AYAYEGMVSS GTGDQIQPTK EGHTTLGETL RRSSSSSSSS SSEDDGQGGR QRKKKSMKEK IKEKLPGSHK QEEHKAGHAM PPAGTGTHEK
201: KGIMEKIKEK LPGHH
101: SGSLAPGETT AYAYEGMVSS GTGDQIQPTK EGHTTLGETL RRSSSSSSSS SSEDDGQGGR QRKKKSMKEK IKEKLPGSHK QEEHKAGHAM PPAGTGTHEK
201: KGIMEKIKEK LPGHH
001: MESYQNQSGA QQTHQQLDQF GNPFPATTGA YGTAGGAPAV AEGGGLSGML HRSGSSSSSS SEDDGLGGRR RKKKGITEKI KEKLPGHHDS NKTSSLGSTT
101: TAYDTGTVHH EKKGMMEKIK EKLPGGHH
101: TAYDTGTVHH EKKGMMEKIK EKLPGGHH
Arabidopsis Description
XERO1Dehydrin Xero 1 [Source:UniProtKB/Swiss-Prot;Acc:P25863]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.