Factsheet for Zm00001d013589_P006

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, mitochondrion, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d000358_P001
Zm00001d010603_P002
Zm00001d011680_P002
Zm00001d014013_P002
Zm00001d014507_P002
Zm00001d017284_P001
Zm00001d025871_P001
Zm00001d032683_P001
Zm00001d037747_P001
Zm00001d039213_P001
Zm00001d039455_P002
Zm00001d042846_P001
Zm00001d043018_P001
Zm00001d043705_P005
Zm00001d051172_P001
Zm00001d052322_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G30880.1	Zm00001d037747_P001	AT1G55190.1	21798944
AT2G30880.1	Zm00001d039455_P002	AT1G55190.1	21798944
AT2G30880.1	Zm00001d039213_P001	AT3G54120.1	21798944
AT2G30880.1	Zm00001d042846_P001	AT3G54120.1	21798944
AT2G30880.1	Zm00001d011680_P002	AT4G00980.1	21798944
AT2G30880.1	Zm00001d043705_P005	AT4G00980.1	21798944
AT2G30880.1	Zm00001d000358_P001	AT4G30080.1	21798944
AT2G30880.1	Zm00001d014013_P002	AT4G30080.1	21798944
AT2G30880.1	Zm00001d014507_P002	AT4G30080.1	21798944
AT2G30880.1	Zm00001d017284_P001	AT4G30080.1	21798944
AT2G30880.1	Zm00001d025871_P001	AT4G30080.1	21798944
AT2G30880.1	Zm00001d032683_P001	AT4G30080.1	21798944
AT2G30880.1	Zm00001d051172_P001	AT4G30080.1	21798944
AT2G30880.1	Zm00001d010603_P002	AT5G01640.1	21798944
AT2G30880.1	Zm00001d043018_P001	AT5G01640.1	21798944
AT2G30880.1	Zm00001d052322_P001	AT5G01640.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG37877	Sorghum	cytosol	96.0	96.0
Os03t0666200-01	Rice	plasma membrane	90.2	90.2
TraesCS4D01G017000.2	Wheat	cytosol, plastid	89.6	89.6
TraesCS4A01G294800.1	Wheat	cytosol, plastid	89.4	89.4
HORVU4Hr1G002870.1	Barley	cytosol	78.0	88.64
TraesCS4B01G018800.2	Wheat	cytosol, plastid	89.4	83.24
Zm00001d034954_P001	Maize	extracellular	94.2	82.2
GSMUA_Achr5P02150_001	Banana	cytosol, plastid	72.8	73.09
Os05t0128700-00	Rice	cytosol	11.6	72.5
Os12t0505950-00	Rice	cytosol	11.6	72.5
Os05t0153901-00	Rice	cytosol	11.2	70.0
GSMUA_Achr9P10020_001	Banana	cytosol	68.4	69.09
VIT_12s0028g00830.t01	Wine grape	cytosol	67.6	67.6
KRH73621	Soybean	endoplasmic reticulum	64.4	65.71
KRH14510	Soybean	cytosol	64.0	65.31
Zm00001d007849_P002	Maize	cytosol, plastid	60.4	63.85
AT2G30880.1	Thale cress	cytosol, plastid	61.8	61.31
Solyc05g021100.2.1	Tomato	cytosol, nucleus, plastid	53.4	60.82
CDX97786	Canola	cytosol, plastid	60.8	60.68
Bra021674.1-P	Field mustard	cytosol	60.6	60.24
CDY29635	Canola	cytosol, plastid	60.6	60.24
Zm00001d018772_P001	Maize	peroxisome	11.0	56.7
Bra022817.1-P	Field mustard	cytosol	28.8	51.61
CDY23978	Canola	cytosol	41.6	44.64
Zm00001d033157_P001	Maize	mitochondrion	7.8	24.84

Protein Annotations

EnsemblPlants:Zm00001d013589_P006	EnsemblPlants:Zm00001d013589_T006	EnsemblPlantsGene:Zm00001d013589	Gene3D:2.30.29.30	InterPro:IPR001849	InterPro:IPR011993
InterPro:PH-like_dom_sf	InterPro:PH_domain	ncoils:Coil	PANTHER:PTHR24356	PANTHER:PTHR24356:SF215	PFAM:PF00169
PFscan:PS50003	ProteinID:AQK63903.1	SEG:seg	SMART:SM00233	SUPFAM:SSF50729	UniParc:UPI000220E091
UniProt:A0A1D6GKP6	MapMan:27.4.3.3	:	:	:	:

Description

PH domain containing protein

Coordinates

chr5:+:14974946..14979586

Molecular Weight (calculated)

54481.4 Da

IEP (calculated)

4.971

GRAVY (calculated)

-0.455

Length

500 amino acids

Sequence
(BLAST)

001: MATNGSSVRV RDTESSLEKV KRQLSSGSGR YLLQGPLLKR SETLRKWNER WVILDPTSGK MEYKLRRNET VIKGTILFDA SSTITLSPVN FQGMPKYDGC
101: CFYIGTPQKK EYFLCAETPG AAKAWVSTLH ATQLVLRAHK EAVNSLAGNG SPATLGTVAT AVANANATAM EATKEIEAAL KVSMRAALGL GTNNSNDGQL
201: DDLTIMKETL RVKDEELQHL AKDIRSRDAT INEIADKLTE TAEAAEAAAS AALTMDEQRR LLCLEIERLK QALERQVEQS MLKLRQSEEK VISLSKEKEQ
301: LMKERDAAFQ EAHMWRVELG KAREQAVIQE ATIARTEEKA RVSEADAAAR IKEAAEKLRT VEKEKEELLA LVGVLQSQVQ REQSSTKQVC GERSESCSGA
401: DSPPPLTKHV DASDDDVDKA CVSDSRSVLV SSDSTEVQLA VDGVDIRPVG DAEWGGFQQS DALIADVREV SPEADGGSLD IPVVNPPPIS DHVQGGATHP

Best Arabidopsis Sequence Match ( AT2G30880.1 )
(BLAST)

001: MASNGASPRI VDATENSLDK IKRQLASGSG RNLLQGPLFK RSETLRKWNE RWVILDPTTG KMEYKTRRNE PTIKGTILFD ENSTISISPV NFQGLPKYNG
101: CCIYIGTPQK KDYFLCAETP GAAKAWVTTL HATQLVLKAH KEAVESLSGS GSATLGTVAT VVAAANSTAL ECSREIQAAM QISLRNALKI TPNKPIDGPL
201: DDLTIMKETL RVKDEELHNL ARELRSRDSM IKEIADKLSE TAEAAVAAAS AAHTMDEQRK IVCVEFERLT TDSQRQQEAT KLKLKELEEK TFTLSKEKDQ
301: LVKERDAALQ EAHMWRSELG KARERVVILE GAVVRAEEKV RVAEASGEAK SKEASQREAT AWTEKQELLA YVNMLQTQLQ RQQLETKQVC EEKTESTNGE
401: ASLPMTKETE KNVDKACLSI SRTASIPGEN VVHMSEEQVV NAQPPVGENE WNDIQATEAR VSDVREISAE TERDRRNSLD IPVVSPEPNV PRNDPPSESF
501: HHQP

Arabidopsis Description

At2g30880/F7F1.9 [Source:UniProtKB/TrEMBL;Acc:Q8VYJ6]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.