Factsheet for Bra022817.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra003171.1-P
Bra007047.1-P
Bra011162.1-P
Bra014355.1-P
Bra024109.1-P
Bra037396.1-P
Bra037983.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G30880.1	Bra014355.1-P	AT1G55190.1	21798944
AT2G30880.1	Bra037983.1-P	AT1G55190.1	21798944
AT2G30880.1	Bra003171.1-P	AT3G54120.1	21798944
AT2G30880.1	Bra007047.1-P	AT3G54120.1	21798944
AT2G30880.1	Bra037396.1-P	AT4G00980.1	21798944
AT2G30880.1	Bra011162.1-P	AT4G30080.1	21798944
AT2G30880.1	Bra024109.1-P	AT4G30080.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d018772_P001	Maize	peroxisome	19.0	54.64
Os12t0505950-00	Rice	cytosol	15.05	52.5
Os05t0128700-00	Rice	cytosol	15.05	52.5
Os05t0153901-00	Rice	cytosol	13.98	48.75
CDY23978	Canola	cytosol	78.49	47.0
Bra021674.1-P	Field mustard	cytosol	84.59	46.92
AT2G30880.1	Thale cress	cytosol, plastid	82.8	45.83
VIT_12s0028g00830.t01	Wine grape	cytosol	66.67	37.2
Solyc05g021100.2.1	Tomato	cytosol, nucleus, plastid	55.56	35.31
KRH73621	Soybean	endoplasmic reticulum	62.01	35.31
KRH14510	Soybean	cytosol	61.65	35.1
HORVU4Hr1G002870.1	Barley	cytosol	50.54	32.05
GSMUA_Achr5P02150_001	Banana	cytosol, plastid	55.56	31.12
Os03t0666200-01	Rice	plasma membrane	52.69	29.4
KXG37877	Sorghum	cytosol	52.33	29.2
Zm00001d007849_P002	Maize	cytosol, plastid	49.1	28.96
Zm00001d013589_P006	Maize	cytosol, plastid	51.61	28.8
TraesCS4A01G294800.1	Wheat	cytosol, plastid	51.61	28.8
TraesCS4D01G017000.2	Wheat	cytosol, plastid	51.61	28.8
GSMUA_Achr9P10020_001	Banana	cytosol	50.54	28.48
TraesCS2D01G255300.2	Wheat	cytosol	48.75	27.98
Os07t0138100-01	Rice	cytosol	48.39	27.89
TraesCS2A01G254800.2	Wheat	cytosol	48.39	27.78
TraesCS2B01G267300.1	Wheat	cytosol	46.95	27.46
TraesCS4B01G018800.2	Wheat	cytosol, plastid	51.61	26.82
KXG34371	Sorghum	mitochondrion	47.67	26.23
Zm00001d034954_P001	Maize	extracellular	51.25	24.96
HORVU2Hr1G060900.13	Barley	plastid	43.01	24.39
Zm00001d033157_P001	Maize	mitochondrion	7.53	13.38

Protein Annotations

EnsemblPlants:Bra022817.1	EnsemblPlants:Bra022817.1-P	EnsemblPlantsGene:Bra022817	ncoils:Coil	PANTHER:PTHR24356	PANTHER:PTHR24356:SF306
SEG:seg	UniParc:UPI00025402A8	UniProt:M4E217	MapMan:35.2	:	:

Description

AT2G30880 (E=5e-066) | pleckstrin homology (PH) domain-containing protein

Coordinates

chrA03:-:7224750..7225950

Molecular Weight (calculated)

30539.2 Da

IEP (calculated)

5.048

GRAVY (calculated)

-0.486

Length

279 amino acids

Sequence
(BLAST)

001: MIKSHLALDI STPPKKDYFL CAETHGAARA NLTVTEVVLQ RFGTVATVVA AANSTALDCS KEIQAAMQVS LRNALSISAM KPIDGPLDDL TIMKLKELEE
101: KTSALSKEKD QLVKERDSAL QEAHMGRSEL GKARERVVIR EGAVVRAEEK ARVAEASGEA KAKEASQGEA TAWTEKQELL AYVNMLQTQL QRQQLETKQV
201: FEEKTESTNG ETSLPMTKET EKDVDKACLS VSRTASMPGE NVVHMSEDGV VNAQAPVGEN EWNDIQAKEA RVSDVKRNI

Best Arabidopsis Sequence Match ( AT2G30880.1 )
(BLAST)

001: MASNGASPRI VDATENSLDK IKRQLASGSG RNLLQGPLFK RSETLRKWNE RWVILDPTTG KMEYKTRRNE PTIKGTILFD ENSTISISPV NFQGLPKYNG
101: CCIYIGTPQK KDYFLCAETP GAAKAWVTTL HATQLVLKAH KEAVESLSGS GSATLGTVAT VVAAANSTAL ECSREIQAAM QISLRNALKI TPNKPIDGPL
201: DDLTIMKETL RVKDEELHNL ARELRSRDSM IKEIADKLSE TAEAAVAAAS AAHTMDEQRK IVCVEFERLT TDSQRQQEAT KLKLKELEEK TFTLSKEKDQ
301: LVKERDAALQ EAHMWRSELG KARERVVILE GAVVRAEEKV RVAEASGEAK SKEASQREAT AWTEKQELLA YVNMLQTQLQ RQQLETKQVC EEKTESTNGE
401: ASLPMTKETE KNVDKACLSI SRTASIPGEN VVHMSEEQVV NAQPPVGENE WNDIQATEAR VSDVREISAE TERDRRNSLD IPVVSPEPNV PRNDPPSESF
501: HHQP

Arabidopsis Description

At2g30880/F7F1.9 [Source:UniProtKB/TrEMBL;Acc:Q8VYJ6]
SUBAcon: [cytosol,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.