Factsheet for Bra021674.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra003171.1-P
Bra007047.1-P
Bra011162.1-P
Bra014355.1-P
Bra024109.1-P
Bra037396.1-P
Bra037983.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G30880.1	Bra014355.1-P	AT1G55190.1	21798944
AT2G30880.1	Bra037983.1-P	AT1G55190.1	21798944
AT2G30880.1	Bra003171.1-P	AT3G54120.1	21798944
AT2G30880.1	Bra007047.1-P	AT3G54120.1	21798944
AT2G30880.1	Bra037396.1-P	AT4G00980.1	21798944
AT2G30880.1	Bra011162.1-P	AT4G30080.1	21798944
AT2G30880.1	Bra024109.1-P	AT4G30080.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY29635	Canola	cytosol, plastid	99.6	99.6
AT2G30880.1	Thale cress	cytosol, plastid	88.27	88.1
Bra022817.1-P	Field mustard	cytosol	46.92	84.59
VIT_12s0028g00830.t01	Wine grape	cytosol	71.17	71.6
KRH73621	Soybean	endoplasmic reticulum	69.38	71.22
KRH14510	Soybean	cytosol	68.99	70.82
Solyc05g021100.2.1	Tomato	cytosol, nucleus, plastid	58.25	66.74
GSMUA_Achr5P02150_001	Banana	cytosol, plastid	63.22	63.86
Os03t0666200-01	Rice	plasma membrane	62.03	62.4
KXG37877	Sorghum	cytosol	62.03	62.4
TraesCS4A01G294800.1	Wheat	cytosol, plastid	61.23	61.6
TraesCS4D01G017000.2	Wheat	cytosol, plastid	61.03	61.4
Zm00001d013589_P006	Maize	cytosol, plastid	60.24	60.6
HORVU4Hr1G002870.1	Barley	cytosol	51.89	59.32
GSMUA_Achr9P10020_001	Banana	cytosol	57.85	58.79
TraesCS4B01G018800.2	Wheat	cytosol, plastid	61.03	57.17
Zm00001d007849_P002	Maize	cytosol, plastid	53.68	57.08
Zm00001d018772_P001	Maize	peroxisome	10.93	56.7
Os07t0138100-01	Rice	cytosol	54.47	56.61
TraesCS2D01G255300.2	Wheat	cytosol	54.27	56.17
TraesCS2A01G254800.2	Wheat	cytosol	54.08	55.97
TraesCS2B01G267300.1	Wheat	cytosol	52.88	55.77
Zm00001d034954_P001	Maize	extracellular	61.63	54.1
Os12t0505950-00	Rice	cytosol	8.55	53.75
Os05t0128700-00	Rice	cytosol	8.55	53.75
KXG34371	Sorghum	mitochondrion	53.88	53.45
HORVU2Hr1G060900.13	Barley	plastid	50.5	51.63
Os05t0153901-00	Rice	cytosol	7.95	50.0
Zm00001d033157_P001	Maize	mitochondrion	4.97	15.92

Protein Annotations

EnsemblPlants:Bra021674.1	EnsemblPlants:Bra021674.1-P	EnsemblPlantsGene:Bra021674	Gene3D:2.30.29.30	InterPro:IPR001849	InterPro:IPR011993
InterPro:PH-like_dom_sf	InterPro:PH_domain	ncoils:Coil	PANTHER:PTHR24356	PANTHER:PTHR24356:SF306	PFAM:PF00169
PFscan:PS50003	SEG:seg	SMART:SM00233	SUPFAM:SSF50729	UniParc:UPI00025447ED	UniProt:M4DYS8
MapMan:27.4.3.3	:	:	:	:	:

Description

AT2G30880 (E=8e-213) | pleckstrin homology (PH) domain-containing protein

Coordinates

chrA04:-:13802948..13805409

Molecular Weight (calculated)

55670.6 Da

IEP (calculated)

5.060

GRAVY (calculated)

-0.612

Length

503 amino acids

Sequence
(BLAST)

001: MASNGASPRP VDATDNSLER IKRQLATGSG RNLLQGPLYK RSETLRKWNE RWVILDPTTG KMEYKTRRNE PAIKGTILFD DNSTITVSPV NFQGLPKYNG
101: CCIYISTPQK KDYFLCAETP GAARAWVTTL HATQLVLKAH KEAVDSLSGS GSSTLGTVAT VVAAANSTAL ECSKEIQAAM QVSLRNALKI TANKPIDGPL
201: DDLTIMKETL RVKDEELQNL ARELRSRDSM IKEIADKLSE TAEAAVAAAS AAHTMDEQRK IVCVELERLS KDSERQQEAA ISKLKEMEEK TSTLSREKDQ
301: LVKERDSALK EAHLWRSELG KARERVVILE GAVVRAEEKA RVAEANGEAK AKEASQREAA AWAEKQELLA YVNMLQTQLQ RQQLETEQVF EEKTESTNGE
401: TSLPMTKETE KDVDKACLSV SKTASMPGEN VVRMSEDQVV NAHAQAPVGE NEWNDIQATE ARVSDVREIS AETERDSLDI TVVTPESDVP RNDLPPESFH
501: HQP

Best Arabidopsis Sequence Match ( AT2G30880.1 )
(BLAST)

001: MASNGASPRI VDATENSLDK IKRQLASGSG RNLLQGPLFK RSETLRKWNE RWVILDPTTG KMEYKTRRNE PTIKGTILFD ENSTISISPV NFQGLPKYNG
101: CCIYIGTPQK KDYFLCAETP GAAKAWVTTL HATQLVLKAH KEAVESLSGS GSATLGTVAT VVAAANSTAL ECSREIQAAM QISLRNALKI TPNKPIDGPL
201: DDLTIMKETL RVKDEELHNL ARELRSRDSM IKEIADKLSE TAEAAVAAAS AAHTMDEQRK IVCVEFERLT TDSQRQQEAT KLKLKELEEK TFTLSKEKDQ
301: LVKERDAALQ EAHMWRSELG KARERVVILE GAVVRAEEKV RVAEASGEAK SKEASQREAT AWTEKQELLA YVNMLQTQLQ RQQLETKQVC EEKTESTNGE
401: ASLPMTKETE KNVDKACLSI SRTASIPGEN VVHMSEEQVV NAQPPVGENE WNDIQATEAR VSDVREISAE TERDRRNSLD IPVVSPEPNV PRNDPPSESF
501: HHQP

Arabidopsis Description

At2g30880/F7F1.9 [Source:UniProtKB/TrEMBL;Acc:Q8VYJ6]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.