Factsheet for Os07t0138100-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0196500-01
Os01t0706000-01
Os01t0827400-01
Os01t0851300-01
Os02t0628600-01
Os04t0367400-02
Os04t0519700-01
Os05t0200280-01
Os05t0474400-01
Os06t0685700-01
Os10t0479900-01
Os11t0107600-01
Os12t0107600-00

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G30880.1	Os01t0196500-01	AT1G55190.1	21798944
AT2G30880.1	Os05t0200280-01	AT1G55190.1	21798944
AT2G30880.1	Os01t0851300-01	AT3G54120.1	21798944
AT2G30880.1	Os04t0367400-02	AT3G54120.1	21798944
AT2G30880.1	Os01t0706000-01	AT4G00980.1	21798944
AT2G30880.1	Os02t0628600-01	AT4G30080.1	21798944
AT2G30880.1	Os04t0519700-01	AT4G30080.1	21798944
AT2G30880.1	Os06t0685700-01	AT4G30080.1	21798944
AT2G30880.1	Os10t0479900-01	AT4G30080.1	21798944
AT2G30880.1	Os01t0827400-01	AT5G01640.1	21798944
AT2G30880.1	Os05t0474400-01	AT5G01640.1	21798944
AT2G30880.1	Os11t0107600-01	AT5G01640.1	21798944
AT2G30880.1	Os12t0107600-00	AT5G01640.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G267300.1	Wheat	cytosol	86.16	87.42
TraesCS2D01G255300.2	Wheat	cytosol	87.6	87.24
TraesCS2A01G254800.2	Wheat	cytosol	87.4	87.04
Zm00001d007849_P002	Maize	cytosol, plastid	82.44	84.36
Zm00001d018772_P001	Maize	peroxisome	16.32	81.44
KXG34371	Sorghum	mitochondrion	84.09	80.28
HORVU2Hr1G060900.13	Barley	plastid	80.17	78.86
Os03t0666200-01	Rice	plasma membrane	64.88	62.8
GSMUA_Achr5P02150_001	Banana	cytosol, plastid	63.43	61.65
GSMUA_Achr9P10020_001	Banana	cytosol	62.19	60.81
KRH14510	Soybean	cytosol	60.95	60.2
KRH73621	Soybean	endoplasmic reticulum	60.95	60.2
VIT_12s0028g00830.t01	Wine grape	cytosol	61.57	59.6
Solyc05g021100.2.1	Tomato	cytosol, nucleus, plastid	50.41	55.58
AT2G30880.1	Thale cress	cytosol, plastid	56.82	54.56
CDX97786	Canola	cytosol, plastid	56.41	54.49
Bra021674.1-P	Field mustard	cytosol	56.61	54.47
CDY29635	Canola	cytosol, plastid	56.61	54.47
Os12t0505950-00	Rice	cytosol	8.88	53.75
Os05t0128700-00	Rice	cytosol	8.88	53.75
Os05t0153901-00	Rice	cytosol	8.26	50.0
Bra022817.1-P	Field mustard	cytosol	27.89	48.39
CDY23978	Canola	cytosol	40.5	42.06

Protein Annotations

Gene3D:2.30.29.30	MapMan:27.4.3.3	EntrezGene:4342362	EMBL:AK059496	ProteinID:BAC83485.1	ProteinID:BAF20771.1
ProteinID:BAS99985.1	ncoils:Coil	ProteinID:EEE66536.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004674
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006464	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0018105
GO:GO:0019538	GO:GO:0035556	InterPro:IPR001849	InterPro:IPR011993	EnsemblPlantsGene:Os07g0138100	EnsemblPlants:Os07t0138100-01
PFAM:PF00169	InterPro:PH-like_dom_sf	InterPro:PH_domain	PFscan:PS50003	PANTHER:PTHR24356	PANTHER:PTHR24356:SF215
UniProt:Q6ZE09	SMART:SM00233	SUPFAM:SSF50729	UniParc:UPI00001BF34B	RefSeq:XP_015646512.1	SEG:seg

Description

OsSWAP70BRac/Rop guanine nucleotide exchange factor, Regulation of immune responses (Os07t0138100-01);Similar to PH domain containing protein. (Os07t0138100-02)

Coordinates

chr7:+:2007670..2012928

Molecular Weight (calculated)

53443.7 Da

IEP (calculated)

4.717

GRAVY (calculated)

-0.489

Length

484 amino acids

Sequence
(BLAST)

001: MASSGSSTVV GEMESSLERV RRQLSSTSSR HLLQGPLLKR SDTLRKWNER WVILDPATGK MEYKIRRSDA AVRGIIVFDS TSTVTLSPMN FHGLPKYDGC
101: CFYIGTPQKK EYFLCAETPS AARAWVSTLH ASQLVLQAHK EAVNSLGGNG PTKLGKVATV VAVANATAIE ASKEVEAAMK VSLRAALGST TNKLSKGQLD
201: DLTIMMETLR VKDDELHQLL QDIRARDATI REITDKLQET AEAAETAASA AHSIDEQRRF LSSELERLKQ DQEKQIEFSL LRLRESEEKA KLLSEEREHL
301: LKERDSALQE AQMWRSELGK ARGNAVILEA AVVRAEEKAR VSAADADMRI NDAASRLDSA TKEKEELVAL VDALQLQIRS QDTSTKQVCE ERSELCSTSS
401: KHVDMEDDNV DKACLSDTDP IPITENIVDL DDDGVDIPTI GVTEWNNPHS SEVSDVREVT TEPEDNSLDI PVDSQPVSEN AFHG

Best Arabidopsis Sequence Match ( AT2G30880.1 )
(BLAST)

001: MASNGASPRI VDATENSLDK IKRQLASGSG RNLLQGPLFK RSETLRKWNE RWVILDPTTG KMEYKTRRNE PTIKGTILFD ENSTISISPV NFQGLPKYNG
101: CCIYIGTPQK KDYFLCAETP GAAKAWVTTL HATQLVLKAH KEAVESLSGS GSATLGTVAT VVAAANSTAL ECSREIQAAM QISLRNALKI TPNKPIDGPL
201: DDLTIMKETL RVKDEELHNL ARELRSRDSM IKEIADKLSE TAEAAVAAAS AAHTMDEQRK IVCVEFERLT TDSQRQQEAT KLKLKELEEK TFTLSKEKDQ
301: LVKERDAALQ EAHMWRSELG KARERVVILE GAVVRAEEKV RVAEASGEAK SKEASQREAT AWTEKQELLA YVNMLQTQLQ RQQLETKQVC EEKTESTNGE
401: ASLPMTKETE KNVDKACLSI SRTASIPGEN VVHMSEEQVV NAQPPVGENE WNDIQATEAR VSDVREISAE TERDRRNSLD IPVVSPEPNV PRNDPPSESF
501: HHQP

Arabidopsis Description

At2g30880/F7F1.9 [Source:UniProtKB/TrEMBL;Acc:Q8VYJ6]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.